RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 CTAGE9A4FU28 777 aa12.44□□□□□ -0.42
SCFD2-202ENST00000401642 EFCAB8A8MWE9 144 aa12.44□□□□□ -0.42
SCFD2-202ENST00000401642 SASH3O75995 380 aa12.44□□□□□ -0.42
SCFD2-202ENST00000401642 FGRP09769 529 aa12.44□□□□□ -0.42
SCFD2-202ENST00000401642 ZSCAN29Q8IWY8 852 aaPredicted RBP12.44□□□□□ -0.42
SCFD2-202ENST00000401642 CCDC148Q8NFR7 591 aa12.44□□□□□ -0.42
SCFD2-202ENST00000401642 PANX2Q96RD6 677 aa12.44□□□□□ -0.42
SCFD2-202ENST00000401642 BARHL2Q9NY43 387 aa12.44□□□□□ -0.42
SCFD2-202ENST00000401642 POLLQ9UGP5 575 aa12.44□□□□□ -0.42
SCFD2-202ENST00000401642 LUC7L2Q9Y383 392 aaKnown RBP12.44□□□□□ -0.42
SCFD2-202ENST00000401642 DUSP10Q9Y6W6 482 aa12.44□□□□□ -0.42
SCFD2-202ENST00000401642 NID2Q14112 1375 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 SERPINB2P05120 415 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 LDHCP07864 332 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 PLA2G4AP47712 749 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 GSTO1P78417 241 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 NONOQ15233 471 aaKnown RBP eCLIP12.43□□□□□ -0.42
SCFD2-202ENST00000401642 KCTD19Q17RG1 926 aaPredicted RBP12.43□□□□□ -0.42
SCFD2-202ENST00000401642 SBK1Q52WX2 424 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 ANKRD13CQ8N6S4 541 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 GOLGA1Q92805 767 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 KCND1Q9NSA2 647 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 RMND1Q9NWS8 449 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 DUOX1Q9NRD9 1551 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 GOLGA6L9A6NEM1 432 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 OR52Z1P0C646 297 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 MATR3P43243 847 aaKnown RBP eCLIP12.43□□□□□ -0.429e-7■■■■■ 27.1
SCFD2-202ENST00000401642 KCNJ6P48051 423 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 ANKRD40Q6AI12 368 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 IRF2BP1Q8IU81 584 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 GLIS3Q8NEA6 775 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 RTFDC1Q9BY42 306 aaPredicted RBP12.43□□□□□ -0.42
SCFD2-202ENST00000401642 ARFGAP3Q9NP61 516 aa12.43□□□□□ -0.42
SCFD2-202ENST00000401642 COL14A1Q05707 1796 aaKnown RBP12.43□□□□□ -0.42
SCFD2-202ENST00000401642 TOM1O60784 492 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 PCP11498 1178 aaKnown RBP12.42□□□□□ -0.42
SCFD2-202ENST00000401642 AKR1B1P15121 316 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 GNAQP50148 359 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 CCDC122Q5T0U0 273 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 KRT26Q7Z3Y9 468 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 REXO1Q8N1G1 1221 aaKnown RBP12.42□□□□□ -0.42
SCFD2-202ENST00000401642 CCDC155Q8N6L0 562 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 TUBGCP2Q9BSJ2 902 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 MMRN2Q9H8L6 949 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 C6orf50Q9HD87 102 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 FLT1P17948 1338 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 CNTNAP4Q9C0A0 1308 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 MYO1BO43795 1136 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 TRAPPC10P48553 1259 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 ARID5AQ03989 594 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 IKQ13123 557 aaPredicted RBP12.42□□□□□ -0.42
SCFD2-202ENST00000401642 TERF2Q15554 542 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 FCHSD1Q86WN1 690 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 RGS22Q8NE09 1264 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 NEK11Q8NG66 645 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 SMCR8Q8TEV9 937 aaPredicted RBP12.42□□□□□ -0.42
SCFD2-202ENST00000401642 NOC4LQ9BVI4 516 aaKnown RBP12.42□□□□□ -0.42
SCFD2-202ENST00000401642 PCDHAC2Q9Y5I4 1007 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 EPN1Q9Y6I3 576 aaPredicted RBP12.42□□□□□ -0.42
SCFD2-202ENST00000401642 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 DDX60Q8IY21 1712 aaKnown RBP12.42□□□□□ -0.42
SCFD2-202ENST00000401642 PLEKP08567 350 aaPredicted RBP12.42□□□□□ -0.42
SCFD2-202ENST00000401642 MSL1Q68DK7 614 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 CYP26C1Q6V0L0 522 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 NUDT12Q9BQG2 462 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 LRWD1Q9UFC0 647 aa12.42□□□□□ -0.42
SCFD2-202ENST00000401642 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
SCFD2-202ENST00000401642 SLC37A4O43826 429 aa12.41□□□□□ -0.42
SCFD2-202ENST00000401642 OAS2P29728 719 aaKnown RBP12.41□□□□□ -0.42
SCFD2-202ENST00000401642 NEK8Q86SG6 692 aa12.41□□□□□ -0.42
SCFD2-202ENST00000401642 NELFCDQ8IXH7 590 aa12.41□□□□□ -0.42
SCFD2-202ENST00000401642 ADSSL1Q8N142 457 aa12.41□□□□□ -0.42
SCFD2-202ENST00000401642 MB21D1Q8N884 522 aa12.41□□□□□ -0.42
SCFD2-202ENST00000401642 CNOT6LQ96LI5 555 aaKnown RBP12.41□□□□□ -0.42
SCFD2-202ENST00000401642 KCNQ5Q9NR82 932 aa12.41□□□□□ -0.42
SCFD2-202ENST00000401642 TTF2Q9UNY4 1162 aaKnown RBP12.41□□□□□ -0.42
SCFD2-202ENST00000401642 LEMD3Q9Y2U8 911 aa12.41□□□□□ -0.42
SCFD2-202ENST00000401642 NAP1L1P55209 391 aaKnown RBP12.41□□□□□ -0.42
SCFD2-202ENST00000401642 FAM193AP78312 1265 aa12.41□□□□□ -0.42
SCFD2-202ENST00000401642 CC2D1AQ6P1N0 951 aaPredicted RBP12.41□□□□□ -0.42
SCFD2-202ENST00000401642 HOMEZQ8IX15 550 aa12.41□□□□□ -0.42
SCFD2-202ENST00000401642 NOA1Q8NC60 698 aaKnown RBP12.41□□□□□ -0.42
SCFD2-202ENST00000401642 CAGE1Q8TC20 777 aa12.41□□□□□ -0.42
SCFD2-202ENST00000401642 PNKPQ96T60 521 aa12.41□□□□□ -0.42
SCFD2-202ENST00000401642 CRACR2AQ9BSW2 395 aa12.41□□□□□ -0.42
SCFD2-202ENST00000401642 COL16A1Q07092 1604 aaPredicted RBP12.4□□□□□ -0.42
SCFD2-202ENST00000401642 PALM3A6NDB9 673 aaPredicted RBP12.4□□□□□ -0.42
SCFD2-202ENST00000401642 TRIM37O94972 964 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 PBX1P40424 430 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 ST5P78524 1137 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 CALCRLQ16602 461 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 PTPROQ16827 1216 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 TMTC1Q8IUR5 882 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 ELOA2Q8IYF1 753 aaPredicted RBP12.4□□□□□ -0.42
SCFD2-202ENST00000401642 CALML4Q96GE6 196 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 LIMA1Q9UHB6 759 aaKnown RBP12.4□□□□□ -0.42
SCFD2-202ENST00000401642 LRP5O75197 1615 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 NHSL1Q5SYE7 1610 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 H7C1D1 291 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 NDUFA10O95299 355 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms