RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 CACNA1FO60840 1977 aa8.33□□□□□ -1.08
CSNK2A1-204ENST00000400227 FAM87AP0C7U9 286 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 XP32Q5T750 250 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 ZNF765Q7L2R6 523 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 ARMCX6Q7L4S7 300 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 ZNF654Q8IZM8 581 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 EAF1Q96JC9 268 aaPredicted RBP8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 DUSP23Q9BVJ7 150 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 KRTAP4-8Q9BYQ9 185 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 ATP10DQ9P241 1426 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 LRRC37A3O60309 1634 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 FER1L4A9Z1Z3 1794 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 N4BP2Q86UW6 1770 aaPredicted RBP8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 TTC21AQ8NDW8 1320 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 DDIT3P35638 169 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 APOBRQ0VD83 1088 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 HSP90AB2PQ58FF8 381 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 ZMYM1Q5SVZ6 1142 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 MRPL41Q8IXM3 137 aaKnown RBP8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 TOP6BLQ8N6T0 577 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 FOXQ1Q9C009 403 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 DCTPP1Q9H773 170 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 PRDM10Q9NQV6 1147 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 CHMP5Q9NZZ3 219 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 PIM2Q9P1W9 311 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 TJP2Q9UDY2 1190 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 LEMD3Q9Y2U8 911 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 TBX22Q9Y458 520 aa8.32□□□□□ -1.08
CSNK2A1-204ENST00000400227 GRIN3BO60391 1043 aa8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 LEFTY1O75610 366 aa8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 TCF3P15923 654 aa8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 PLCG1P19174 1290 aa8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 KRT24Q2M2I5 525 aa8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 CYP27C1Q4G0S4 372 aa8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 TMEM201Q5SNT2 666 aa8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 SLC6A19Q695T7 634 aa8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 MCATQ8IVS2 390 aaKnown RBP8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 HSCBQ8IWL3 235 aa8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 ANKRD44Q8N8A2 993 aa8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 ACSF2Q96CM8 615 aaPredicted RBP8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 TMEM87BQ96K49 555 aa8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 KIF2CQ99661 725 aa8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 BRMS1Q9HCU9 246 aa8.31□□□□□ -1.08
CSNK2A1-204ENST00000400227 SBNO1A3KN83 1393 aa8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 TUBGCP6Q96RT7 1819 aa8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 MAP3K19Q56UN5 1328 aa8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 CEP170BQ9Y4F5 1589 aaPredicted RBP8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 HTR3BO95264 441 aa8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 CST3P01034 146 aaPredicted RBP8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 MCM4P33991 863 aa8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 SEZ6Q53EL9 994 aa8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 PRAMEF13Q5VWM6 474 aa8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 MCM10Q7L590 875 aa8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 SLITRK4Q8IW52 837 aa8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 MFSD2AQ8NA29 543 aa8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 FAM208AQ9UK61 1670 aaKnown RBP8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 FLT4P35916 1363 aa8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 KDRP35968 1356 aa8.3□□□□□ -1.08
CSNK2A1-204ENST00000400227 PTPRCP08575 1304 aa8.29□□□□□ -1.08
CSNK2A1-204ENST00000400227 NWD1Q149M9 1564 aa8.29□□□□□ -1.08
CSNK2A1-204ENST00000400227 CEBPAP49715 358 aaPredicted RBP8.29□□□□□ -1.08
CSNK2A1-204ENST00000400227 RAD51AP2Q09MP3 1159 aa8.29□□□□□ -1.08
CSNK2A1-204ENST00000400227 NKD1Q969G9 470 aa8.29□□□□□ -1.08
CSNK2A1-204ENST00000400227 SLC26A8Q96RN1 970 aa8.29□□□□□ -1.08
CSNK2A1-204ENST00000400227 TGIF2Q9GZN2 237 aa8.29□□□□□ -1.08
CSNK2A1-204ENST00000400227 REV1Q9UBZ9 1251 aa8.29□□□□□ -1.08
CSNK2A1-204ENST00000400227 EID1Q9Y6B2 187 aa8.29□□□□□ -1.08
CSNK2A1-204ENST00000400227 RTL1A6NKG5 1358 aa8.29□□□□□ -1.08
CSNK2A1-204ENST00000400227 IGSF1Q8N6C5 1336 aa8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 ANKARQ7Z5J8 1434 aa8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 COBLO75128 1261 aa8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 CDC45O75419 566 aa8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 ATE1O95260 518 aa8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 GSPT1P15170 499 aaKnown RBP8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 FOSL1P15407 271 aa8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 GRIK1P39086 918 aa8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 MTHFSDQ2M296 383 aaKnown RBP8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 TTC22Q5TAA0 569 aa8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 CEP85Q6P2H3 762 aa8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 INTS5Q6P9B9 1019 aaKnown RBP8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 RPAP2Q8IXW5 612 aaPredicted RBP8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 PCDHB14Q9Y5E9 798 aa8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 MSH6P52701 1360 aa8.28□□□□□ -1.08
CSNK2A1-204ENST00000400227 CYP26A1O43174 497 aa8.27□□□□□ -1.09
CSNK2A1-204ENST00000400227 SLITRK5O94991 958 aa8.27□□□□□ -1.09
CSNK2A1-204ENST00000400227 CD97P48960 835 aa8.27□□□□□ -1.09
CSNK2A1-204ENST00000400227 REXO1Q8N1G1 1221 aaKnown RBP8.27□□□□□ -1.09
CSNK2A1-204ENST00000400227 DPH2Q9BQC3 489 aaPredicted RBP8.27□□□□□ -1.09
CSNK2A1-204ENST00000400227 EHMT1Q9H9B1 1298 aa8.27□□□□□ -1.09
CSNK2A1-204ENST00000400227 EOMESO95936 686 aa8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 HOXA10P31260 410 aaPredicted RBP8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 PAK2Q13177 524 aa8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 FAM214BQ7L5A3 538 aa8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 C16orf71Q8IYS4 520 aaPredicted RBP8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 MIPEPQ99797 713 aa8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 IGSF5Q9NSI5 407 aa8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 CHD2O14647 1828 aaKnown RBP8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 LTN1O94822 1766 aa8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 FSD2A1L4K1 749 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms