RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 GAS8O95995 478 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 ALAS1P13196 640 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 GADL1Q6ZQY3 521 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 USP17L1Q7RTZ2 530 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 PI4K2BQ8TCG2 481 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 PAGR1Q9BTK6 254 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 TRIM7Q9C029 511 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 STMN4Q9H169 189 aaPredicted RBP3.59□□□□□ -1.83
KNL1-202ENST00000399668 GLT8D2Q9H1C3 349 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 BCL2L12Q9HB09 334 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 WDR70Q9NW82 654 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 ASIC3Q9UHC3 531 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 FRMPD1Q5SYB0 1578 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 TMEM131LA2VDJ0 1609 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 GOLGA6BA6NDN3 693 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 CCDC160A6NGH7 325 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 KCNK3O14649 394 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 LRRN2O75325 713 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 RAD17O75943 681 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 FLOT1O75955 427 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 ERCC5P28715 1186 aaPredicted RBP3.59□□□□□ -1.83
KNL1-202ENST00000399668 IL6STP40189 918 aaPredicted RBP3.59□□□□□ -1.83
KNL1-202ENST00000399668 BTDP43251 543 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 MAGEA1P43355 309 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 CALCOCO2Q13137 446 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 DMP1Q13316 513 aaPredicted RBP3.59□□□□□ -1.83
KNL1-202ENST00000399668 TAF12Q16514 161 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 USPL1Q5W0Q7 1092 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 CCDC121Q6ZUS5 278 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 OTUD6AQ7L8S5 288 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 NEK8Q86SG6 692 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 FBXO11Q86XK2 927 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 CCDC127Q96BQ5 260 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 CCDC77Q9BR77 488 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 OSBPL3Q9H4L5 887 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 ST7Q9NRC1 585 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 OGFRQ9NZT2 677 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 PCDHA1Q9Y5I3 950 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 IVNS1ABPQ9Y6Y0 642 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 CACNA1DQ01668 2161 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 KDM3AQ9Y4C1 1321 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 PTCH1Q13635 1447 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 MON2Q7Z3U7 1717 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 ACTN4O43707 911 aaKnown RBP3.59□□□□□ -1.83
KNL1-202ENST00000399668 TTLL1O95922 423 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 SLC16A2P36021 539 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 MCAMP43121 646 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 FMNL3Q8IVF7 1028 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 MSANTD4Q8NCY6 345 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 AFAP1L1Q8TED9 768 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 GPR101Q96P66 508 aaPredicted RBP3.59□□□□□ -1.83
KNL1-202ENST00000399668 CSRNP1Q96S65 589 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 STK32BQ9NY57 414 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 ANKFY1Q9P2R3 1169 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 ERBB3P21860 1342 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 INO80Q9ULG1 1556 aaPredicted RBP3.59□□□□□ -1.83
KNL1-202ENST00000399668 LARGE1O95461 756 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 OR52Z1P0C646 297 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 CMA1P23946 247 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 DNM2P50570 870 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 STAT2P52630 851 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 MECOMQ03112 1051 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 PTPN12Q05209 780 aaKnown RBP3.59□□□□□ -1.83
KNL1-202ENST00000399668 ABCB5Q2M3G0 1257 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.59□□□□□ -1.83
KNL1-202ENST00000399668 CCDC89Q8N998 374 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 SECISBP2LQ93073 1101 aaKnown RBP3.59□□□□□ -1.83
KNL1-202ENST00000399668 COA7Q96BR5 231 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 LRRC45Q96CN5 670 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 BCS1LQ9Y276 419 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 PTPN22Q9Y2R2 807 aa3.59□□□□□ -1.83
KNL1-202ENST00000399668 ATP10DQ9P241 1426 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 ZBED4O75132 1171 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 ZMYND10O75800 440 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 ATP2B4P23634 1241 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 GTF2A1P52655 376 aaPredicted RBP3.59□□□□□ -1.84
KNL1-202ENST00000399668 RPS6KA1Q15418 735 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 C6orf163Q5TEZ5 329 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 LRCH2Q5VUJ6 765 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 MIGA2Q7L4E1 593 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 CCDC105Q8IYK2 499 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 MYOCDQ8IZQ8 938 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 GPR161Q8N6U8 529 aaKnown RBP3.59□□□□□ -1.84
KNL1-202ENST00000399668 GLG1Q92896 1179 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 RNF34Q969K3 372 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 FOXP1Q9H334 677 aaPredicted RBP3.59□□□□□ -1.84
KNL1-202ENST00000399668 PCDHA5Q9Y5H7 936 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 UBR1Q8IWV7 1749 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 SHPRHQ149N8 1683 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 MEIS1O00470 390 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 NDUFAB1O14561 156 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 CIAO1O76071 339 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 ATP2A2P16615 1042 aaKnown RBP3.59□□□□□ -1.84
KNL1-202ENST00000399668 SLC8A3P57103 927 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 IRX3P78415 501 aaPredicted RBP3.59□□□□□ -1.84
KNL1-202ENST00000399668 CCDC14Q49A88 953 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 TTC31Q49AM3 519 aaPredicted RBP3.59□□□□□ -1.84
KNL1-202ENST00000399668 NAA35Q5VZE5 725 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 NBPF11Q86T75 865 aa3.59□□□□□ -1.84
KNL1-202ENST00000399668 SLFN12Q8IYM2 578 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms