RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CNTNAP5Q8WYK1 1306 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 NGLY1Q96IV0 654 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 POLD4Q9HCU8 107 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 GOLGA8KD6RF30 607 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 TROAPQ12815 778 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 PURBQ96QR8 312 aaKnown RBP15.6■□□□□ 0.09
APOB-202ENST00000399256 RBM28Q9NW13 759 aaKnown RBP15.6■□□□□ 0.09
APOB-202ENST00000399256 PSMA7O14818 248 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 MOCS3O95396 460 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 INPP5BP32019 993 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 VAV2P52735 878 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 PDCLQ13371 301 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 TTMPQ5BVD1 217 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 NFRKBQ6P4R8 1299 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 FNBP4Q8N3X1 1017 aaPredicted RBP15.6■□□□□ 0.09
APOB-202ENST00000399256 MMGT1Q8N4V1 131 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 CSGALNACT2Q8N6G5 542 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 CDCA7Q9BWT1 371 aaPredicted RBP15.6■□□□□ 0.09
APOB-202ENST00000399256 DISC1Q9NRI5 854 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 TMOD3Q9NYL9 352 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 ABCF2Q9UG63 623 aa15.6■□□□□ 0.09
APOB-202ENST00000399256 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.6■□□□□ 0.09
APOB-202ENST00000399256 ZBED6P86452 979 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 CCDC170Q8IYT3 715 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 SPATA4Q8NEY3 305 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 RUFY1Q96T51 708 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 NCAPGQ9BPX3 1015 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 HNRNPH1P31943 449 aaKnown RBP15.59■□□□□ 0.09
APOB-202ENST00000399256 NAALADL2Q58DX5 795 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 KCTD16Q68DU8 428 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 TTI2Q6NXR4 508 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 GBP6Q6ZN66 633 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 SH2D3CQ8N5H7 860 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 CCDC42Q96M95 316 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 DOCK2Q92608 1830 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 NKRFO15226 690 aaKnown RBP eCLIP15.59■□□□□ 0.09
APOB-202ENST00000399256 OPA1O60313 960 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 NMT2O60551 498 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 LONP1P36776 959 aaKnown RBP15.59■□□□□ 0.09
APOB-202ENST00000399256 ATP1A2P50993 1020 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 SPA17Q15506 151 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 RASGRP4Q8TDF6 673 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 DUSP9Q99956 384 aaKnown RBP15.59■□□□□ 0.09
APOB-202ENST00000399256 SH3GL2Q99962 352 aa15.59■□□□□ 0.09
APOB-202ENST00000399256 MAGEB6P1A0A0J9YX57 407 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 KLRC4O43908 158 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 MTIF2P46199 727 aaKnown RBP15.58■□□□□ 0.08
APOB-202ENST00000399256 MNAT1P51948 309 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 TYW1BQ6NUM6 668 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 KCNV1Q6PIU1 500 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 CNOT6LQ96LI5 555 aaKnown RBP15.58■□□□□ 0.08
APOB-202ENST00000399256 MYCBPQ99417 103 aaPredicted RBP15.58■□□□□ 0.08
APOB-202ENST00000399256 BCORQ6W2J9 1755 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 ITGB4P16144 1822 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 NCK2O43639 380 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 TACC1O75410 805 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 SCG2P13521 617 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 EVX2Q03828 476 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 BARGINQ6ZT62 677 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 IQCA1Q86XH1 822 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 TRIM58Q8NG06 486 aa15.58■□□□□ 0.08
APOB-202ENST00000399256 NDUFAB1O14561 156 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 HSF2BPO75031 334 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 STARD3NLO95772 234 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 DYNLL1P63167 89 aaKnown RBP15.57■□□□□ 0.08
APOB-202ENST00000399256 VPS72Q15906 364 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 CCDC181Q5TID7 509 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 C4orf32Q8N8J7 132 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 OSBPL9Q96SU4 736 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 NUP58Q9BVL2 599 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 IFIH1Q9BYX4 1025 aaKnown RBP15.57■□□□□ 0.08
APOB-202ENST00000399256 TRAPPC10P48553 1259 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 EPHB4P54760 987 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 NOC4LQ9BVI4 516 aaKnown RBP15.57■□□□□ 0.08
APOB-202ENST00000399256 TSGA10Q9BZW7 698 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 FAM205AQ6ZU69 1335 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 MYH3P11055 1940 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 ZEB2O60315 1214 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 HAUS3Q68CZ6 603 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 GIMAP8Q8ND71 665 aaPredicted RBP15.57■□□□□ 0.08
APOB-202ENST00000399256 SH2D4AQ9H788 454 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 ANAPC4Q9UJX5 808 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 PCDHA13Q9Y5I0 950 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 CAPN7Q9Y6W3 813 aa15.57■□□□□ 0.08
APOB-202ENST00000399256 USO1O60763 962 aaKnown RBP15.56■□□□□ 0.08
APOB-202ENST00000399256 CALM1P0DP23 149 aa15.56■□□□□ 0.08
APOB-202ENST00000399256 CALM2P0DP24 149 aa15.56■□□□□ 0.08
APOB-202ENST00000399256 CALM3P0DP25 149 aa15.56■□□□□ 0.08
APOB-202ENST00000399256 ANKRD40Q6AI12 368 aa15.56■□□□□ 0.08
APOB-202ENST00000399256 POTEDQ86YR6 584 aa15.56■□□□□ 0.08
APOB-202ENST00000399256 C2CD5Q86YS7 1000 aa15.56■□□□□ 0.08
APOB-202ENST00000399256 GPKOWQ92917 476 aaPredicted RBP eCLIP15.56■□□□□ 0.08
APOB-202ENST00000399256 ZIM3Q96PE6 472 aa15.56■□□□□ 0.08
APOB-202ENST00000399256 STIM2Q9P246 746 aa15.56■□□□□ 0.08
APOB-202ENST00000399256 KRT14P02533 472 aa15.56■□□□□ 0.08
APOB-202ENST00000399256 KCNB1Q14721 858 aa15.56■□□□□ 0.08
APOB-202ENST00000399256 SWT1Q5T5J6 900 aaKnown RBP15.56■□□□□ 0.08
APOB-202ENST00000399256 ARL6IP4Q66PJ3 421 aaKnown RBP15.56■□□□□ 0.08
APOB-202ENST00000399256 ANKRD13CQ8N6S4 541 aa15.56■□□□□ 0.08
APOB-202ENST00000399256 LRRC15Q8TF66 581 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms