RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 TTI2Q6NXR4 508 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 MAPKAPK5Q8IW41 473 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 CCDC47Q96A33 483 aaKnown RBP12.78□□□□□ -0.36
C4orf3-201ENST00000399075 EYA3Q99504 573 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 UBXN6Q9BZV1 441 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 PLIN4Q96Q06 1357 aa12.77□□□□□ -0.36
C4orf3-201ENST00000399075 LOC102724159A0A0B4J2E5 919 aa12.77□□□□□ -0.36
C4orf3-201ENST00000399075 RNF225M0QZC1 329 aaPredicted RBP12.77□□□□□ -0.36
C4orf3-201ENST00000399075 COBLO75128 1261 aa12.77□□□□□ -0.36
C4orf3-201ENST00000399075 ATP2B4P23634 1241 aa12.77□□□□□ -0.36
C4orf3-201ENST00000399075 ARHGAP25P42331 645 aa12.77□□□□□ -0.36
C4orf3-201ENST00000399075 BTDP43251 543 aa12.77□□□□□ -0.36
C4orf3-201ENST00000399075 BRD3Q15059 726 aa12.77□□□□□ -0.36
C4orf3-201ENST00000399075 PWP2Q15269 919 aaKnown RBP12.77□□□□□ -0.36
C4orf3-201ENST00000399075 ZNF569Q5MCW4 686 aa12.77□□□□□ -0.36
C4orf3-201ENST00000399075 TRAPPC3LQ5T215 181 aa12.77□□□□□ -0.36
C4orf3-201ENST00000399075 FNBP4Q8N3X1 1017 aaPredicted RBP12.77□□□□□ -0.36
C4orf3-201ENST00000399075 CCDC151A5D8V7 595 aa12.77□□□□□ -0.37
C4orf3-201ENST00000399075 ADRA2BP18089 450 aa12.77□□□□□ -0.37
C4orf3-201ENST00000399075 NAPAP54920 295 aa12.77□□□□□ -0.37
C4orf3-201ENST00000399075 CRY2Q49AN0 593 aa12.77□□□□□ -0.37
C4orf3-201ENST00000399075 CABP7Q86V35 215 aa12.77□□□□□ -0.37
C4orf3-201ENST00000399075 SLF2Q8IX21 1173 aa12.77□□□□□ -0.37
C4orf3-201ENST00000399075 ACRBPQ8NEB7 543 aa12.77□□□□□ -0.37
C4orf3-201ENST00000399075 OR8K1Q8NGG5 319 aa12.77□□□□□ -0.37
C4orf3-201ENST00000399075 RRP36Q96EU6 259 aaKnown RBP12.77□□□□□ -0.37
C4orf3-201ENST00000399075 C7orf25Q9BPX7 421 aa12.77□□□□□ -0.37
C4orf3-201ENST00000399075 PARD6BQ9BYG5 372 aa12.77□□□□□ -0.37
C4orf3-201ENST00000399075 CD209Q9NNX6 404 aa12.77□□□□□ -0.37
C4orf3-201ENST00000399075 ARFGAP3Q9NP61 516 aa12.77□□□□□ -0.37
C4orf3-201ENST00000399075 CAPN11Q9UMQ6 739 aa12.77□□□□□ -0.37
C4orf3-201ENST00000399075 GAKO14976 1311 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 BICDL2A1A5D9 508 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 TBC1D8O95759 1140 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 DNM2P50570 870 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 WHAMMP3Q1A5X7 153 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 NEK8Q86SG6 692 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 TEX11Q8IYF3 940 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 NGLY1Q96IV0 654 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 TRIM47Q96LD4 638 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 NAPGQ99747 312 aaPredicted RBP12.76□□□□□ -0.37
C4orf3-201ENST00000399075 MAGEC2Q9UBF1 373 aaPredicted RBP12.76□□□□□ -0.37
C4orf3-201ENST00000399075 SAP30BPQ9UHR5 308 aaKnown RBP12.76□□□□□ -0.37
C4orf3-201ENST00000399075 MAPK8IP1Q9UQF2 711 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 A0A0U1RQJ8 604 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 TRIM49BA6NDI0 452 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 PLCG1P19174 1290 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 PMS1P54277 932 aaKnown RBP12.76□□□□□ -0.37
C4orf3-201ENST00000399075 GPSM2P81274 684 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 ZNF662Q6ZS27 426 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 SLC35F6Q8N357 371 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 RETREG2Q8NC44 543 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 ATRIPQ8WXE1 791 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 TRIM9Q9C026 710 aa12.76□□□□□ -0.37
C4orf3-201ENST00000399075 SEC63Q9UGP8 760 aaKnown RBP12.76□□□□□ -0.37
C4orf3-201ENST00000399075 SRGNP10124 158 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 CCNE1P24864 410 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 HOXA7P31268 230 aaPredicted RBP12.75□□□□□ -0.37
C4orf3-201ENST00000399075 MMP14P50281 582 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 KIF4BQ2VIQ3 1234 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 FAM114A1Q8IWE2 563 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 MSANTD4Q8NCY6 345 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 LRRC15Q8TF66 581 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 TBC1D22AQ8WUA7 517 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 HNRNPLLQ8WVV9 542 aaKnown RBP12.75□□□□□ -0.37
C4orf3-201ENST00000399075 LUC7L2Q9Y383 392 aaKnown RBP12.75□□□□□ -0.37
C4orf3-201ENST00000399075 EPN1Q9Y6I3 576 aaPredicted RBP12.75□□□□□ -0.37
C4orf3-201ENST00000399075 C10orf71Q711Q0 1435 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 TTC26A0AVF1 554 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 SMCO2A6NFE2 343 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 NDUFA10O95299 355 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 RHBDL3P58872 404 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 AMPD3Q01432 767 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 MEA1Q16626 185 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 TXNRD1Q16881 649 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 SOGA3Q5TF21 947 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 PRR5LQ6MZQ0 368 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 RPGRQ92834 1020 aaKnown RBP12.75□□□□□ -0.37
C4orf3-201ENST00000399075 C8orf37Q96NL8 207 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 DUSP9Q99956 384 aaKnown RBP12.75□□□□□ -0.37
C4orf3-201ENST00000399075 NUP58Q9BVL2 599 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 RAB21Q9UL25 225 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 LRRC37AA6NMS7 1700 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 CCNT1O60563 726 aaKnown RBP12.75□□□□□ -0.37
C4orf3-201ENST00000399075 TOM1O60784 492 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 UFL1O94874 794 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 GOLGA8HP0CJ92 632 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 P2RX5Q93086 422 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 IQCDQ96DY2 449 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 RIOX1Q9H6W3 641 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 EXOC1Q9NV70 894 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 GGA1Q9UJY5 639 aa12.75□□□□□ -0.37
C4orf3-201ENST00000399075 SEC31AO94979 1220 aaKnown RBP12.74□□□□□ -0.37
C4orf3-201ENST00000399075 TUBBP07437 444 aa12.74□□□□□ -0.37
C4orf3-201ENST00000399075 PIP4K2BP78356 416 aa12.74□□□□□ -0.37
C4orf3-201ENST00000399075 LETM2Q2VYF4 491 aa12.74□□□□□ -0.37
C4orf3-201ENST00000399075 TTYH3Q9C0H2 523 aa12.74□□□□□ -0.37
C4orf3-201ENST00000399075 HAUS4Q9H6D7 363 aa12.74□□□□□ -0.37
C4orf3-201ENST00000399075 LTBP1Q14766 1721 aa12.74□□□□□ -0.37
C4orf3-201ENST00000399075 AMPD2Q01433 879 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 1078.3 ms