RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ZHX1Q9UKY1 873 aaPredicted RBP15.76■□□□□ 0.11
VCX3A-202ENST00000398729 RAD50Q92878 1312 aa15.75■□□□□ 0.11
VCX3A-202ENST00000398729 KDM4AO75164 1064 aa15.75■□□□□ 0.11
VCX3A-202ENST00000398729 ICAM1P05362 532 aa15.75■□□□□ 0.11
VCX3A-202ENST00000398729 EPHB4P54760 987 aa15.75■□□□□ 0.11
VCX3A-202ENST00000398729 C1orf53Q5VUE5 145 aa15.75■□□□□ 0.11
VCX3A-202ENST00000398729 RNF180Q86T96 592 aa15.75■□□□□ 0.11
VCX3A-202ENST00000398729 DGKHQ86XP1 1220 aa15.75■□□□□ 0.11
VCX3A-202ENST00000398729 ZKSCAN3Q9BRR0 538 aa15.75■□□□□ 0.11
VCX3A-202ENST00000398729 RANBP17Q9H2T7 1088 aaKnown RBP15.75■□□□□ 0.11
VCX3A-202ENST00000398729 A1CFQ9NQ94 594 aaKnown RBP15.75■□□□□ 0.11
VCX3A-202ENST00000398729 PRDM5Q9NQX1 630 aaPredicted RBP15.75■□□□□ 0.11
VCX3A-202ENST00000398729 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.75■□□□□ 0.11
VCX3A-202ENST00000398729 FAM184BQ9ULE4 1060 aa15.75■□□□□ 0.11
VCX3A-202ENST00000398729 CCPG1Q9ULG6 757 aa15.75■□□□□ 0.11
VCX3A-202ENST00000398729 NCOR1O75376 2440 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 B4E1Z4 1266 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 CNTN2Q02246 1040 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 TLE2Q04725 743 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 ZNF543Q08ER8 600 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 ACVR2BQ13705 512 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 ARMCX2Q7L311 632 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 FAM133AQ8N9E0 248 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 FGD4Q96M96 766 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 KRT23Q9C075 422 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 IL25Q9H293 177 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 ABHD16BQ9H3Z7 469 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 CNNM2Q9H8M5 875 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 PRDM6Q9NQX0 595 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 PNMA2Q9UL42 364 aa15.74■□□□□ 0.11
VCX3A-202ENST00000398729 PGK1P00558 417 aa15.73■□□□□ 0.11
VCX3A-202ENST00000398729 SNHG28P0DPA3 235 aa15.73■□□□□ 0.11
VCX3A-202ENST00000398729 MUM1L1Q5H9M0 696 aa15.73■□□□□ 0.11
VCX3A-202ENST00000398729 GPATCH4Q5T3I0 446 aaKnown RBP15.73■□□□□ 0.11
VCX3A-202ENST00000398729 CCDC144CPQ8IYA2 1237 aa15.73■□□□□ 0.11
VCX3A-202ENST00000398729 ZSCAN10Q96SZ4 725 aaPredicted RBP15.73■□□□□ 0.11
VCX3A-202ENST00000398729 BDP1A6H8Y1 2624 aa15.73■□□□□ 0.11
VCX3A-202ENST00000398729 MCM3APO60318 1980 aa15.73■□□□□ 0.11
VCX3A-202ENST00000398729 CHD9Q3L8U1 2897 aa15.73■□□□□ 0.11
VCX3A-202ENST00000398729 ASB14A6NK59 587 aa15.72■□□□□ 0.11
VCX3A-202ENST00000398729 DUSP11O75319 330 aaKnown RBP15.72■□□□□ 0.11
VCX3A-202ENST00000398729 CHMLP26374 656 aa15.72■□□□□ 0.11
VCX3A-202ENST00000398729 NSMFQ6X4W1 530 aa15.72■□□□□ 0.11
VCX3A-202ENST00000398729 PNMA1Q8ND90 353 aa15.72■□□□□ 0.11
VCX3A-202ENST00000398729 ANKS1AQ92625 1134 aa15.72■□□□□ 0.11
VCX3A-202ENST00000398729 LENG1Q96BZ8 264 aaPredicted RBP15.72■□□□□ 0.11
VCX3A-202ENST00000398729 KAT14Q9H8E8 782 aa15.72■□□□□ 0.11
VCX3A-202ENST00000398729 CYP39A1Q9NYL5 469 aa15.72■□□□□ 0.11
VCX3A-202ENST00000398729 ZSWIM5Q9P217 1185 aa15.72■□□□□ 0.11
VCX3A-202ENST00000398729 PHF24Q9UPV7 400 aa15.72■□□□□ 0.11
VCX3A-202ENST00000398729 MYO9BQ13459 2157 aa15.71■□□□□ 0.11
VCX3A-202ENST00000398729 SOWAHBA6NEL2 793 aa15.71■□□□□ 0.11
VCX3A-202ENST00000398729 ADAMTS4O75173 837 aa15.71■□□□□ 0.11
VCX3A-202ENST00000398729 UBAC1Q9BSL1 405 aa15.71■□□□□ 0.11
VCX3A-202ENST00000398729 TSEN34Q9BSV6 310 aaKnown RBP15.71■□□□□ 0.11
VCX3A-202ENST00000398729 TNKSO95271 1327 aa15.7■□□□□ 0.1
VCX3A-202ENST00000398729 SYNRGQ9UMZ2 1314 aa15.7■□□□□ 0.1
VCX3A-202ENST00000398729 GOLGA8HP0CJ92 632 aa15.7■□□□□ 0.1
VCX3A-202ENST00000398729 TRDNQ13061 729 aa15.7■□□□□ 0.1
VCX3A-202ENST00000398729 GRIN2CQ14957 1233 aa15.7■□□□□ 0.1
VCX3A-202ENST00000398729 CCDC144BQ3MJ40 725 aa15.7■□□□□ 0.1
VCX3A-202ENST00000398729 ENAHQ8N8S7 591 aaPredicted RBP15.7■□□□□ 0.1
VCX3A-202ENST00000398729 SPC25Q9HBM1 224 aa15.7■□□□□ 0.1
VCX3A-202ENST00000398729 U3KPZ7 1027 aaPredicted RBP15.7■□□□□ 0.1
VCX3A-202ENST00000398729 A0A1W2PQ45 241 aaPredicted RBP15.69■□□□□ 0.1
VCX3A-202ENST00000398729 A0A1W2PQY0 241 aa15.69■□□□□ 0.1
VCX3A-202ENST00000398729 KIAA0355O15063 1070 aa15.69■□□□□ 0.1
VCX3A-202ENST00000398729 FOSL2P15408 326 aa15.69■□□□□ 0.1
VCX3A-202ENST00000398729 BAATQ14032 418 aaPredicted RBP15.69■□□□□ 0.1
VCX3A-202ENST00000398729 ASPRV1Q53RT3 343 aa15.69■□□□□ 0.1
VCX3A-202ENST00000398729 KLHDC9Q8NEP7 349 aa15.69■□□□□ 0.1
VCX3A-202ENST00000398729 NUP133Q8WUM0 1156 aa15.69■□□□□ 0.1
VCX3A-202ENST00000398729 KATNBL1Q9H079 304 aa15.69■□□□□ 0.1
VCX3A-202ENST00000398729 WDR19Q8NEZ3 1342 aa15.68■□□□□ 0.1
VCX3A-202ENST00000398729 PTPDC1A2A3K4 754 aa15.68■□□□□ 0.1
VCX3A-202ENST00000398729 MOXD2PA6NHM9 499 aa15.68■□□□□ 0.1
VCX3A-202ENST00000398729 NFIBO00712 420 aa15.68■□□□□ 0.1
VCX3A-202ENST00000398729 SGSM2O43147 1006 aa15.68■□□□□ 0.1
VCX3A-202ENST00000398729 CLTBP09497 229 aa15.68■□□□□ 0.1
VCX3A-202ENST00000398729 C6orf222P0C671 652 aaPredicted RBP15.68■□□□□ 0.1
VCX3A-202ENST00000398729 ACLYP53396 1101 aa15.68■□□□□ 0.1
VCX3A-202ENST00000398729 PTH1RQ03431 593 aa15.68■□□□□ 0.1
VCX3A-202ENST00000398729 IFIT1BQ5T764 474 aaKnown RBP15.68■□□□□ 0.1
VCX3A-202ENST00000398729 USP38Q8NB14 1042 aa15.68■□□□□ 0.1
VCX3A-202ENST00000398729 PCSK9Q8NBP7 692 aaKnown RBP15.68■□□□□ 0.1
VCX3A-202ENST00000398729 UBA5Q9GZZ9 404 aa15.68■□□□□ 0.1
VCX3A-202ENST00000398729 ADD3Q9UEY8 706 aaKnown RBP15.68■□□□□ 0.1
VCX3A-202ENST00000398729 ASTN1O14525 1302 aa15.68■□□□□ 0.1
VCX3A-202ENST00000398729 LOC102724159A0A0B4J2E5 919 aa15.67■□□□□ 0.1
VCX3A-202ENST00000398729 ADCY6O43306 1168 aa15.67■□□□□ 0.1
VCX3A-202ENST00000398729 CYP21A2P08686 494 aa15.67■□□□□ 0.1
VCX3A-202ENST00000398729 PARP1P09874 1014 aaKnown RBP15.67■□□□□ 0.1
VCX3A-202ENST00000398729 CST5P28325 142 aaPredicted RBP15.67■□□□□ 0.1
VCX3A-202ENST00000398729 GJA9P57773 515 aa15.67■□□□□ 0.1
VCX3A-202ENST00000398729 TNFAIP2Q03169 654 aa15.67■□□□□ 0.1
VCX3A-202ENST00000398729 PWP2Q15269 919 aaKnown RBP15.67■□□□□ 0.1
VCX3A-202ENST00000398729 KCNA10Q16322 511 aa15.67■□□□□ 0.1
VCX3A-202ENST00000398729 RNF207Q6ZRF8 634 aa15.67■□□□□ 0.1
VCX3A-202ENST00000398729 NOL8Q76FK4 1167 aaKnown RBP15.67■□□□□ 0.1
VCX3A-202ENST00000398729 CLEC4DQ8WXI8 215 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms