RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 C22orf23Q9BZE7 217 aa18.33■□□□□ 0.53
MBD1-207ENST00000398488 A1CFQ9NQ94 594 aaKnown RBP18.33■□□□□ 0.53
MBD1-207ENST00000398488 DNAJC25-GNG10A0A024R161 153 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 GOLGA8AA7E2F4 631 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 GOLGA8BA8MQT2 603 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 XRCC5P13010 732 aaKnown RBP18.33■□□□□ 0.52
MBD1-207ENST00000398488 PDIA3P30101 505 aaKnown RBP18.33■□□□□ 0.52
MBD1-207ENST00000398488 KIF5BP33176 963 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 COPB2P35606 906 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 CNTN2Q02246 1040 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 KCTD2Q14681 263 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 RTN1Q16799 776 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 TKFCQ3LXA3 575 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 DPP9Q86TI2 863 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 PXYLP1Q8TE99 480 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 ZNF333Q96JL9 665 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 APBA2Q99767 749 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 SPZ1Q9BXG8 430 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 BACH2Q9BYV9 841 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 ACAD9Q9H845 621 aa18.33■□□□□ 0.52
MBD1-207ENST00000398488 DDX49Q9Y6V7 483 aaKnown RBP18.33■□□□□ 0.52
MBD1-207ENST00000398488 OPLAHO14841 1288 aa18.32■□□□□ 0.52
MBD1-207ENST00000398488 ZBTB5O15062 677 aa18.32■□□□□ 0.52
MBD1-207ENST00000398488 EIF5BO60841 1220 aaKnown RBP18.32■□□□□ 0.52
MBD1-207ENST00000398488 DTNBO60941 627 aa18.32■□□□□ 0.52
MBD1-207ENST00000398488 INHAP05111 366 aa18.32■□□□□ 0.52
MBD1-207ENST00000398488 RBM25P49756 843 aaKnown RBP18.32■□□□□ 0.52
MBD1-207ENST00000398488 AK2P54819 239 aa18.32■□□□□ 0.52
MBD1-207ENST00000398488 SYNE3Q6ZMZ3 975 aa18.32■□□□□ 0.52
MBD1-207ENST00000398488 FBXO11Q86XK2 927 aa18.32■□□□□ 0.52
MBD1-207ENST00000398488 SLAIN1Q8ND83 568 aa18.32■□□□□ 0.52
MBD1-207ENST00000398488 NCOA5Q9HCD5 579 aaKnown RBP18.32■□□□□ 0.52
MBD1-207ENST00000398488 ASTN1O14525 1302 aa18.31■□□□□ 0.52
MBD1-207ENST00000398488 PPFIA3O75145 1194 aa18.31■□□□□ 0.52
MBD1-207ENST00000398488 ANKRD35Q8N283 1001 aa18.31■□□□□ 0.52
MBD1-207ENST00000398488 MAML3Q96JK9 1138 aa18.31■□□□□ 0.52
MBD1-207ENST00000398488 CYP39A1Q9NYL5 469 aa18.31■□□□□ 0.52
MBD1-207ENST00000398488 FBXO40Q9UH90 709 aa18.31■□□□□ 0.52
MBD1-207ENST00000398488 TPCN1Q9ULQ1 816 aa18.31■□□□□ 0.52
MBD1-207ENST00000398488 LCTP09848 1927 aa18.31■□□□□ 0.52
MBD1-207ENST00000398488 CNTNAP5Q8WYK1 1306 aa18.3■□□□□ 0.52
MBD1-207ENST00000398488 MYH6P13533 1939 aa18.3■□□□□ 0.52
MBD1-207ENST00000398488 SOWAHBA6NEL2 793 aa18.3■□□□□ 0.52
MBD1-207ENST00000398488 CYP2C19P33261 490 aa18.3■□□□□ 0.52
MBD1-207ENST00000398488 METAP2P50579 478 aaKnown RBP eCLIP18.3■□□□□ 0.52
MBD1-207ENST00000398488 NEK4P51957 841 aa18.3■□□□□ 0.52
MBD1-207ENST00000398488 CCT2P78371 535 aaKnown RBP18.3■□□□□ 0.52
MBD1-207ENST00000398488 BAATQ14032 418 aaPredicted RBP18.3■□□□□ 0.52
MBD1-207ENST00000398488 NSMFQ6X4W1 530 aa18.3■□□□□ 0.52
MBD1-207ENST00000398488 SLC30A10Q6XR72 485 aa18.3■□□□□ 0.52
MBD1-207ENST00000398488 DDX11Q96FC9 970 aa18.3■□□□□ 0.52
MBD1-207ENST00000398488 ALDH8A1Q9H2A2 487 aaPredicted RBP18.3■□□□□ 0.52
MBD1-207ENST00000398488 BRCA2P51587 3418 aa18.3■□□□□ 0.52
MBD1-207ENST00000398488 NID2Q14112 1375 aa18.3■□□□□ 0.52
MBD1-207ENST00000398488 PNMA6FA0A0J9YX94 578 aa18.29■□□□□ 0.52
MBD1-207ENST00000398488 LARGE1O95461 756 aa18.29■□□□□ 0.52
MBD1-207ENST00000398488 SMARCA1P28370 1054 aa18.29■□□□□ 0.52
MBD1-207ENST00000398488 GNAQP50148 359 aa18.29■□□□□ 0.52
MBD1-207ENST00000398488 FAM133AQ8N9E0 248 aa18.29■□□□□ 0.52
MBD1-207ENST00000398488 TRPV1Q8NER1 839 aa18.29■□□□□ 0.52
MBD1-207ENST00000398488 LZTS2Q9BRK4 669 aa18.29■□□□□ 0.52
MBD1-207ENST00000398488 AMNQ9BXJ7 453 aa18.29■□□□□ 0.52
MBD1-207ENST00000398488 UNC93B1Q9H1C4 597 aa18.29■□□□□ 0.52
MBD1-207ENST00000398488 BIN2Q9UBW5 565 aaPredicted RBP18.29■□□□□ 0.52
MBD1-207ENST00000398488 PLXNA1Q9UIW2 1896 aa18.29■□□□□ 0.52
MBD1-207ENST00000398488 CCDC85CA6NKD9 419 aa18.28■□□□□ 0.52
MBD1-207ENST00000398488 HMGCRP04035 888 aa18.28■□□□□ 0.52
MBD1-207ENST00000398488 RCAN1P53805 252 aa18.28■□□□□ 0.52
MBD1-207ENST00000398488 CACNB2Q08289 660 aaPredicted RBP18.28■□□□□ 0.52
MBD1-207ENST00000398488 STK3Q13188 491 aa18.28■□□□□ 0.52
MBD1-207ENST00000398488 NTRK3Q16288 839 aa18.28■□□□□ 0.52
MBD1-207ENST00000398488 PRAMEF19Q5SWL8 479 aa18.28■□□□□ 0.52
MBD1-207ENST00000398488 NOL8Q76FK4 1167 aaKnown RBP18.28■□□□□ 0.52
MBD1-207ENST00000398488 RBM28Q9NW13 759 aaKnown RBP18.28■□□□□ 0.52
MBD1-207ENST00000398488 COL20A1Q9P218 1284 aa18.28■□□□□ 0.52
MBD1-207ENST00000398488 PCDHA1Q9Y5I3 950 aa18.28■□□□□ 0.52
MBD1-207ENST00000398488 ABCB11O95342 1321 aa18.28■□□□□ 0.52
MBD1-207ENST00000398488 MAP3K21Q5TCX8 1036 aa18.28■□□□□ 0.52
MBD1-207ENST00000398488 ZNF274Q96GC6 653 aaPredicted RBP18.28■□□□□ 0.52
MBD1-207ENST00000398488 V9GY48 417 aaPredicted RBP18.28■□□□□ 0.52
MBD1-207ENST00000398488 POTEB2H3BUK9 544 aa18.27■□□□□ 0.51
MBD1-207ENST00000398488 CCL5P13501 91 aa18.27■□□□□ 0.51
MBD1-207ENST00000398488 PRKAR2AP13861 404 aaKnown RBP18.27■□□□□ 0.51
MBD1-207ENST00000398488 CCND3P30281 292 aaPredicted RBP18.27■□□□□ 0.51
MBD1-207ENST00000398488 RPS6P62753 249 aaKnown RBP18.27■□□□□ 0.51
MBD1-207ENST00000398488 OLFML2BQ68BL8 750 aa18.27■□□□□ 0.51
MBD1-207ENST00000398488 RRP36Q96EU6 259 aaKnown RBP18.27■□□□□ 0.51
MBD1-207ENST00000398488 TBC1D32Q96NH3 1257 aa18.27■□□□□ 0.51
MBD1-207ENST00000398488 DIS3Q9Y2L1 958 aaKnown RBP18.27■□□□□ 0.51
MBD1-207ENST00000398488 PTPDC1A2A3K4 754 aa18.26■□□□□ 0.51
MBD1-207ENST00000398488 POTEFA5A3E0 1075 aa18.26■□□□□ 0.51
MBD1-207ENST00000398488 CALML3P27482 149 aa18.26■□□□□ 0.51
MBD1-207ENST00000398488 TYW1BQ6NUM6 668 aa18.26■□□□□ 0.51
MBD1-207ENST00000398488 RNF207Q6ZRF8 634 aa18.26■□□□□ 0.51
MBD1-207ENST00000398488 GPKOWQ92917 476 aaPredicted RBP eCLIP18.26■□□□□ 0.51
MBD1-207ENST00000398488 PHKBQ93100 1093 aa18.26■□□□□ 0.51
MBD1-207ENST00000398488 CAPN15O75808 1086 aa18.25■□□□□ 0.51
MBD1-207ENST00000398488 SNAI1O95863 264 aaPredicted RBP18.25■□□□□ 0.51
MBD1-207ENST00000398488 SOX10P56693 466 aa18.25■□□□□ 0.51
MBD1-207ENST00000398488 SCRN1Q12765 414 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms