RNA–Protein interactions for RNA: ENST00000398367.1

UBASH3A-203, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best) BASIC

Gene UBASH3A, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-203ENST00000398367 SPECC1Q5M775 1068 aa16.63■□□□□ 0.25
UBASH3A-203ENST00000398367 KANK3Q6NY19 840 aa16.63■□□□□ 0.25
UBASH3A-203ENST00000398367 DTHD1Q6ZMT9 781 aa16.63■□□□□ 0.25
UBASH3A-203ENST00000398367 RNF214Q8ND24 703 aa16.63■□□□□ 0.25
UBASH3A-203ENST00000398367 CNNM3Q8NE01 707 aa16.63■□□□□ 0.25
UBASH3A-203ENST00000398367 KIAA1468Q9P260 1216 aa16.63■□□□□ 0.25
UBASH3A-203ENST00000398367 USP25Q9UHP3 1055 aa16.63■□□□□ 0.25
UBASH3A-203ENST00000398367 NEMFO60524 1076 aa16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 ZRSR1Q15695 479 aaKnown RBP16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 GPR162Q16538 588 aa16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 NOL9Q5SY16 702 aaKnown RBP16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 CCDC84Q86UT8 332 aaPredicted RBP16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 SULF1Q8IWU6 871 aa16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 FAM200AQ8TCP9 573 aa16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 SYMPKQ92797 1274 aaKnown RBP16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 KLRG1Q96E93 195 aa16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 OR52Z1P0C646 297 aa16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 TXLNAP40222 546 aa16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 UBE2SQ16763 222 aa16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 LONRF3Q496Y0 759 aa16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 USP50Q70EL3 339 aaPredicted RBP16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 PANK2Q9BZ23 570 aa16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 ANO10Q9NW15 660 aa16.62■□□□□ 0.25
UBASH3A-203ENST00000398367 SSC5DA1L4H1 1573 aa16.61■□□□□ 0.25
UBASH3A-203ENST00000398367 POLR2DO15514 142 aaKnown RBP16.61■□□□□ 0.25
UBASH3A-203ENST00000398367 FOSP01100 380 aaPredicted RBP16.61■□□□□ 0.25
UBASH3A-203ENST00000398367 GCFC2P16383 781 aaKnown RBP16.61■□□□□ 0.25
UBASH3A-203ENST00000398367 PTPRAP18433 802 aa16.61■□□□□ 0.25
UBASH3A-203ENST00000398367 USH1GQ495M9 461 aa16.61■□□□□ 0.25
UBASH3A-203ENST00000398367 ANO6Q4KMQ2 910 aa16.61■□□□□ 0.25
UBASH3A-203ENST00000398367 PRAMEF18Q5VWM3 479 aa16.61■□□□□ 0.25
UBASH3A-203ENST00000398367 PPP4R3AQ6IN85 833 aa16.61■□□□□ 0.25
UBASH3A-203ENST00000398367 ZC3H15Q8WU90 426 aaKnown RBP16.61■□□□□ 0.25
UBASH3A-203ENST00000398367 KIFC2Q96AC6 838 aa16.61■□□□□ 0.25
UBASH3A-203ENST00000398367 SNAP25P60880 206 aa16.6■□□□□ 0.25
UBASH3A-203ENST00000398367 IL17AQ16552 155 aa16.6■□□□□ 0.25
UBASH3A-203ENST00000398367 ZNF280CQ8ND82 737 aa16.6■□□□□ 0.25
UBASH3A-203ENST00000398367 EPSTI1Q96J88 318 aa16.6■□□□□ 0.25
UBASH3A-203ENST00000398367 AK8Q96MA6 479 aa16.6■□□□□ 0.25
UBASH3A-203ENST00000398367 SLF1Q9BQI6 1058 aa16.6■□□□□ 0.25
UBASH3A-203ENST00000398367 PNMA2Q9UL42 364 aa16.6■□□□□ 0.25
UBASH3A-203ENST00000398367 ATAD5Q96QE3 1844 aa16.6■□□□□ 0.25
UBASH3A-203ENST00000398367 PIK3CDO00329 1044 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 MEIS2O14770 477 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 USP11P51784 963 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 BACE1P56817 501 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 MTMR2Q13614 643 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 PRPF38AQ8NAV1 312 aaKnown RBP16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 ZKSCAN4Q969J2 545 aaPredicted RBP16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 TMEM60Q9H2L4 133 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 MRPL11Q9Y3B7 192 aaKnown RBP16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 ABCB11O95342 1321 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 DOCK1Q14185 1865 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 USP17L15C9J2P7 530 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 C19orf81C9J6K1 198 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 USP17L13C9JLJ4 530 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 USP17L11C9JVI0 530 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 USP17L18D6R9N7 530 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 USP17L22D6RA61 530 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 USP17L17D6RBQ6 530 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 USP17L19D6RCP7 530 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 USP17L20D6RJB6 530 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 ACTN4O43707 911 aaKnown RBP16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 SLFN14P0C7P3 912 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 CCDC173Q0VFZ6 552 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 USP17L24Q0WX57 530 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 USP17L6PQ6QN14 398 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 USP49Q70CQ1 688 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 CEP57L1Q8IYX8 460 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 IQUBQ8NA54 791 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 ANO3Q9BYT9 981 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 NAT10Q9H0A0 1025 aaKnown RBP16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 TUBE1Q9UJT0 475 aa16.59■□□□□ 0.25
UBASH3A-203ENST00000398367 GLTPD2A6NH11 291 aa16.58■□□□□ 0.24
UBASH3A-203ENST00000398367 SPDYE3A6NKU9 549 aa16.58■□□□□ 0.24
UBASH3A-203ENST00000398367 FDX1P10109 184 aa16.58■□□□□ 0.24
UBASH3A-203ENST00000398367 VCAM1P19320 739 aa16.58■□□□□ 0.24
UBASH3A-203ENST00000398367 SPP2Q13103 211 aa16.58■□□□□ 0.24
UBASH3A-203ENST00000398367 CALCRLQ16602 461 aa16.58■□□□□ 0.24
UBASH3A-203ENST00000398367 CCDC174Q6PII3 467 aa16.58■□□□□ 0.24
UBASH3A-203ENST00000398367 MOXD1Q6UVY6 613 aa16.58■□□□□ 0.24
UBASH3A-203ENST00000398367 PDILTQ8N807 584 aa16.58■□□□□ 0.24
UBASH3A-203ENST00000398367 C12orf42Q96LP6 360 aa16.58■□□□□ 0.24
UBASH3A-203ENST00000398367 EMILIN3Q9NT22 766 aa16.58■□□□□ 0.24
UBASH3A-203ENST00000398367 SERTAD1Q9UHV2 236 aa16.58■□□□□ 0.24
UBASH3A-203ENST00000398367 IQCA1LA6NCM1 817 aa16.57■□□□□ 0.24
UBASH3A-203ENST00000398367 PPP1R12BO60237 982 aaPredicted RBP16.57■□□□□ 0.24
UBASH3A-203ENST00000398367 ICAM1P05362 532 aa16.57■□□□□ 0.24
UBASH3A-203ENST00000398367 EPHX2P34913 555 aa16.57■□□□□ 0.24
UBASH3A-203ENST00000398367 ZNF165P49910 485 aa16.57■□□□□ 0.24
UBASH3A-203ENST00000398367 MDM2Q00987 491 aaPredicted RBP16.57■□□□□ 0.24
UBASH3A-203ENST00000398367 POSTNQ15063 836 aa16.57■□□□□ 0.24
UBASH3A-203ENST00000398367 KRT26Q7Z3Y9 468 aa16.57■□□□□ 0.24
UBASH3A-203ENST00000398367 DHX58Q96C10 678 aa16.57■□□□□ 0.24
UBASH3A-203ENST00000398367 MTMR9Q96QG7 549 aa16.57■□□□□ 0.24
UBASH3A-203ENST00000398367 TANGO6Q9C0B7 1094 aa16.57■□□□□ 0.24
UBASH3A-203ENST00000398367 DNAJC25Q9H1X3 360 aa16.57■□□□□ 0.24
UBASH3A-203ENST00000398367 FBXO28Q9NVF7 368 aa16.57■□□□□ 0.24
UBASH3A-203ENST00000398367 ZHX2Q9Y6X8 837 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms