RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 G3V3G9 751 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 STXBP3O00186 592 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 KIAA0391O15091 583 aaKnown RBP6.6□□□□□ -1.35
PTPRD-206ENST00000397617 MAPTP10636 758 aaKnown RBP6.6□□□□□ -1.35
PTPRD-206ENST00000397617 BMT2Q1RMZ1 405 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 DCAF8Q5TAQ9 597 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 C4orf32Q8N8J7 132 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 JDP2Q8WYK2 163 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 TRIM9Q9C026 710 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 COL11A2P13942 1736 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-206ENST00000397617 ATP8B1O43520 1251 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 FKBP3Q00688 224 aaKnown RBP6.6□□□□□ -1.35
PTPRD-206ENST00000397617 PPP1R2P3Q6NXS1 205 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 KIF18AQ8NI77 898 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.6□□□□□ -1.35
PTPRD-206ENST00000397617 PANK2Q9BZ23 570 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 THAP9Q9H5L6 903 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 GDPD2Q9HCC8 539 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 RNF14Q9UBS8 474 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 WDR46O15213 610 aaKnown RBP6.59□□□□□ -1.35
PTPRD-206ENST00000397617 SHMT1P34896 483 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 ETF1P62495 437 aaKnown RBP6.59□□□□□ -1.35
PTPRD-206ENST00000397617 CUL4BQ13620 913 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 CCDC155Q8N6L0 562 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 CEP95Q96GE4 821 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 NFE2L3Q9Y4A8 694 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 ZNF646O15015 1829 aaPredicted RBP6.59□□□□□ -1.35
PTPRD-206ENST00000397617 FRMD3A2A2Y4 597 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 SPDYE2BA6NHP3 402 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 MAPK13O15264 365 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 TRIM37O94972 964 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 SPDYE6P0CI01 402 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 RRP12Q5JTH9 1297 aaKnown RBP6.59□□□□□ -1.35
PTPRD-206ENST00000397617 CCDC170Q8IYT3 715 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 POLR3CQ9BUI4 534 aaPredicted RBP6.59□□□□□ -1.35
PTPRD-206ENST00000397617 MAD2L2Q9UI95 211 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 IPO7O95373 1038 aaKnown RBP6.59□□□□□ -1.35
PTPRD-206ENST00000397617 USP17L8P0C7I0 530 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 SPDYE2Q495Y8 402 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 ZNF658Q5TYW1 1059 aaPredicted RBP6.59□□□□□ -1.35
PTPRD-206ENST00000397617 ZNF710Q8N1W2 664 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 NUP133Q8WUM0 1156 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 KIAA1683Q9H0B3 1180 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 GTF2IP78347 998 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 WWC2Q6AWC2 1192 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 UNC13DQ70J99 1090 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 MCF2L2Q86YR7 1114 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 PHKBQ93100 1093 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 PFASO15067 1338 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 C19orf81C9J6K1 198 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 GAP43P17677 238 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 NAPAP54920 295 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 EHHADHQ08426 723 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 DPYDQ12882 1025 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 MTMR9Q96QG7 549 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 TRIM34Q9BYJ4 488 aa6.59□□□□□ -1.35
PTPRD-206ENST00000397617 MRPL11Q9Y3B7 192 aaKnown RBP6.59□□□□□ -1.35
PTPRD-206ENST00000397617 CRKP46108 304 aa6.59□□□□□ -1.36
PTPRD-206ENST00000397617 ICA1Q05084 483 aa6.59□□□□□ -1.36
PTPRD-206ENST00000397617 NOLC1Q14978 699 aaKnown RBP eCLIP6.59□□□□□ -1.36
PTPRD-206ENST00000397617 RRAGBQ5VZM2 374 aa6.59□□□□□ -1.36
PTPRD-206ENST00000397617 ADSSL1Q8N142 457 aa6.59□□□□□ -1.36
PTPRD-206ENST00000397617 A0A1W2PQJ5 194 aa6.59□□□□□ -1.36
PTPRD-206ENST00000397617 DIXDC1Q155Q3 683 aa6.59□□□□□ -1.36
PTPRD-206ENST00000397617 NAALADL2Q58DX5 795 aa6.59□□□□□ -1.36
PTPRD-206ENST00000397617 RSBN1LQ6PCB5 846 aaPredicted RBP6.59□□□□□ -1.36
PTPRD-206ENST00000397617 FAXDC2Q96IV6 333 aa6.59□□□□□ -1.36
PTPRD-206ENST00000397617 CYTH3O43739 400 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 SLC9A9Q8IVB4 645 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 TAF4BQ92750 862 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 TMX1Q9H3N1 280 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 FBXO40Q9UH90 709 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 FRMPD4Q14CM0 1322 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 RPL13P26373 211 aaKnown RBP6.58□□□□□ -1.36
PTPRD-206ENST00000397617 RPA1P27694 616 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 NIM1KQ8IY84 436 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 CLIP2Q9UDT6 1046 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 ADD3Q9UEY8 706 aaKnown RBP6.58□□□□□ -1.36
PTPRD-206ENST00000397617 CTDSPL2Q05D32 466 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 DLGAP5Q15398 846 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 CERKLQ49MI3 558 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-206ENST00000397617 USP37Q86T82 979 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 PLCB1Q9NQ66 1216 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 GPHNQ9NQX3 736 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-206ENST00000397617 USP40Q9NVE5 1235 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 PIM2Q9P1W9 311 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 A0A1B0GVL5 298 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 BMP3P12645 472 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 CLUL1Q15846 466 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 BICDL1Q6ZP65 573 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 MB21D1Q8N884 522 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 ZC3H15Q8WU90 426 aaKnown RBP6.58□□□□□ -1.36
PTPRD-206ENST00000397617 HAUS4Q9H6D7 363 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 SSU72P8A0A1W2PR75 194 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 Q4G0T1 1027 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 APOBEC3FQ8IUX4 373 aaKnown RBP6.58□□□□□ -1.36
PTPRD-206ENST00000397617 C12orf56Q8IXR9 622 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 ZC3H3Q8IXZ2 948 aaKnown RBP6.58□□□□□ -1.36
PTPRD-206ENST00000397617 EXOC8Q8IYI6 725 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 PRPF38AQ8NAV1 312 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms