RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 C17orf99Q6UX52 265 aa27.23■■□□□ 1.95
TSPAN4-203ENST00000397397 R3HDMLQ9H3Y0 253 aa27.23■■□□□ 1.95
TSPAN4-203ENST00000397397 hCG_1984214I3L0E3 225 aa27.22■■□□□ 1.95
TSPAN4-203ENST00000397397 BCRP11274 1271 aa27.22■■□□□ 1.95
TSPAN4-203ENST00000397397 RIOX2Q8IUF8 465 aa27.22■■□□□ 1.95
TSPAN4-203ENST00000397397 ZNF713Q8N859 430 aaPredicted RBP27.22■■□□□ 1.95
TSPAN4-203ENST00000397397 MOV10L1Q9BXT6 1211 aaKnown RBP27.22■■□□□ 1.95
TSPAN4-203ENST00000397397 SAGE1Q9NXZ1 904 aa27.22■■□□□ 1.95
TSPAN4-203ENST00000397397 DAXXQ9UER7 740 aaPredicted RBP27.22■■□□□ 1.95
TSPAN4-203ENST00000397397 ABCB11O95342 1321 aa27.22■■□□□ 1.95
TSPAN4-203ENST00000397397 STXBP3O00186 592 aa27.21■■□□□ 1.95
TSPAN4-203ENST00000397397 FOSBP53539 338 aa27.21■■□□□ 1.95
TSPAN4-203ENST00000397397 CFHR5Q9BXR6 569 aa27.21■■□□□ 1.95
TSPAN4-203ENST00000397397 HOMER2Q9NSB8 354 aa27.21■■□□□ 1.95
TSPAN4-203ENST00000397397 BARHL2Q9NY43 387 aa27.21■■□□□ 1.95
TSPAN4-203ENST00000397397 KIF3AQ9Y496 699 aa27.21■■□□□ 1.95
TSPAN4-203ENST00000397397 RIPK3Q9Y572 518 aa27.21■■□□□ 1.95
TSPAN4-203ENST00000397397 NAPAP54920 295 aa27.2■■□□□ 1.94
TSPAN4-203ENST00000397397 CCNA1P78396 465 aa27.2■■□□□ 1.94
TSPAN4-203ENST00000397397 TKFCQ3LXA3 575 aa27.2■■□□□ 1.94
TSPAN4-203ENST00000397397 TRERF1Q96PN7 1200 aa27.2■■□□□ 1.94
TSPAN4-203ENST00000397397 VPS54Q9P1Q0 977 aa27.2■■□□□ 1.94
TSPAN4-203ENST00000397397 MRPL11Q9Y3B7 192 aaKnown RBP27.2■■□□□ 1.94
TSPAN4-203ENST00000397397 SLC25A27O95847 323 aa27.19■■□□□ 1.94
TSPAN4-203ENST00000397397 NCAPG2Q86XI2 1143 aa27.19■■□□□ 1.94
TSPAN4-203ENST00000397397 RNF146Q9NTX7 359 aa27.19■■□□□ 1.94
TSPAN4-203ENST00000397397 XBP1P17861 261 aa27.18■■□□□ 1.94
TSPAN4-203ENST00000397397 COPB2P35606 906 aa27.18■■□□□ 1.94
TSPAN4-203ENST00000397397 TYW1BQ6NUM6 668 aa27.18■■□□□ 1.94
TSPAN4-203ENST00000397397 SH3GLB2Q9NR46 395 aa27.18■■□□□ 1.94
TSPAN4-203ENST00000397397 ERCC3P19447 782 aa27.17■■□□□ 1.94
TSPAN4-203ENST00000397397 PPP1R18Q6NYC8 613 aa27.17■■□□□ 1.94
TSPAN4-203ENST00000397397 CCAR1Q8IX12 1150 aaKnown RBP27.17■■□□□ 1.94
TSPAN4-203ENST00000397397 TNS4Q8IZW8 715 aa27.17■■□□□ 1.94
TSPAN4-203ENST00000397397 SHCBP1Q8NEM2 672 aa27.17■■□□□ 1.94
TSPAN4-203ENST00000397397 CCDC12Q8WUD4 166 aaPredicted RBP27.17■■□□□ 1.94
TSPAN4-203ENST00000397397 TRIM29Q14134 588 aa27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 MUM1L1Q5H9M0 696 aa27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 CHST13Q8NET6 341 aa27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 CCDC148Q8NFR7 591 aa27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 SHISA4Q96DD7 197 aa27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 C8orf76Q96K31 380 aa27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 PORCNQ9H237 461 aa27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 EFCC1Q9HA90 598 aa27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 GJB4Q9NTQ9 266 aa27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 WDR78Q5VTH9 848 aa27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 CLEC4DQ8WXI8 215 aa27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 MROH8Q9H579 483 aa27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 ACAD9Q9H845 621 aa27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 CWC22Q9HCG8 908 aaKnown RBP27.16■■□□□ 1.94
TSPAN4-203ENST00000397397 CASP8AP2Q9UKL3 1982 aa27.15■■□□□ 1.94
TSPAN4-203ENST00000397397 NLRP5P59047 1200 aa27.15■■□□□ 1.94
TSPAN4-203ENST00000397397 FBXO40Q9UH90 709 aa27.15■■□□□ 1.94
TSPAN4-203ENST00000397397 KCNJ14Q9UNX9 436 aa27.15■■□□□ 1.94
TSPAN4-203ENST00000397397 SMCO2A6NFE2 343 aa27.14■■□□□ 1.93
TSPAN4-203ENST00000397397 NFIBO00712 420 aa27.14■■□□□ 1.93
TSPAN4-203ENST00000397397 GUCY1B3Q02153 619 aa27.14■■□□□ 1.93
TSPAN4-203ENST00000397397 LARP1BQ659C4 914 aaKnown RBP27.14■■□□□ 1.93
TSPAN4-203ENST00000397397 ECM2O94769 699 aaPredicted RBP27.13■■□□□ 1.93
TSPAN4-203ENST00000397397 MAPK4P31152 587 aa27.13■■□□□ 1.93
TSPAN4-203ENST00000397397 ADCY7P51828 1080 aa27.13■■□□□ 1.93
TSPAN4-203ENST00000397397 KRT40Q6A162 431 aa27.13■■□□□ 1.93
TSPAN4-203ENST00000397397 MCF2L2Q86YR7 1114 aa27.13■■□□□ 1.93
TSPAN4-203ENST00000397397 FAM177A1Q8N128 213 aaPredicted RBP27.13■■□□□ 1.93
TSPAN4-203ENST00000397397 PSTPIP2Q9H939 334 aa27.13■■□□□ 1.93
TSPAN4-203ENST00000397397 C6orf50Q9HD87 102 aa27.13■■□□□ 1.93
TSPAN4-203ENST00000397397 RBBP6Q7Z6E9 1792 aaKnown RBP27.13■■□□□ 1.93
TSPAN4-203ENST00000397397 ESYT2A0FGR8 921 aa27.12■■□□□ 1.93
TSPAN4-203ENST00000397397 OPLAHO14841 1288 aa27.12■■□□□ 1.93
TSPAN4-203ENST00000397397 PDCP20941 246 aa27.12■■□□□ 1.93
TSPAN4-203ENST00000397397 SP3Q02447 781 aa27.12■■□□□ 1.93
TSPAN4-203ENST00000397397 NSMFQ6X4W1 530 aa27.12■■□□□ 1.93
TSPAN4-203ENST00000397397 CUL5Q93034 780 aa27.12■■□□□ 1.93
TSPAN4-203ENST00000397397 IPO9Q96P70 1041 aaKnown RBP27.12■■□□□ 1.93
TSPAN4-203ENST00000397397 PHF20Q9BVI0 1012 aa27.12■■□□□ 1.93
TSPAN4-203ENST00000397397 ZMYND12Q9H0C1 365 aa27.12■■□□□ 1.93
TSPAN4-203ENST00000397397 RIC8AQ9NPQ8 531 aa27.12■■□□□ 1.93
TSPAN4-203ENST00000397397 GPR25O00155 361 aa27.11■■□□□ 1.93
TSPAN4-203ENST00000397397 CFBP00751 764 aa27.11■■□□□ 1.93
TSPAN4-203ENST00000397397 FBXO18Q8NFZ0 1043 aa27.11■■□□□ 1.93
TSPAN4-203ENST00000397397 TBC1D5Q92609 795 aa27.11■■□□□ 1.93
TSPAN4-203ENST00000397397 H3BQV1 296 aa27.1■■□□□ 1.93
TSPAN4-203ENST00000397397 CALML3P27482 149 aa27.1■■□□□ 1.93
TSPAN4-203ENST00000397397 GNA11P29992 359 aa27.1■■□□□ 1.93
TSPAN4-203ENST00000397397 MRPL12P52815 198 aaKnown RBP27.1■■□□□ 1.93
TSPAN4-203ENST00000397397 IFFO2Q5TF58 517 aa27.1■■□□□ 1.93
TSPAN4-203ENST00000397397 MMP19Q99542 508 aa27.1■■□□□ 1.93
TSPAN4-203ENST00000397397 GLT8D2Q9H1C3 349 aa27.1■■□□□ 1.93
TSPAN4-203ENST00000397397 PLXNB2O15031 1838 aa27.1■■□□□ 1.93
TSPAN4-203ENST00000397397 MGAMO43451 1857 aa27.09■■□□□ 1.93
TSPAN4-203ENST00000397397 GCOM1H8Y6P7 765 aaPredicted RBP27.09■■□□□ 1.93
TSPAN4-203ENST00000397397 POLR2MP0CAP2 368 aa27.09■■□□□ 1.93
TSPAN4-203ENST00000397397 GPR142Q7Z601 462 aa27.09■■□□□ 1.93
TSPAN4-203ENST00000397397 PLEKHH3Q7Z736 793 aa27.09■■□□□ 1.93
TSPAN4-203ENST00000397397 ANKRD35Q8N283 1001 aa27.09■■□□□ 1.93
TSPAN4-203ENST00000397397 RGS22Q8NE09 1264 aa27.09■■□□□ 1.93
TSPAN4-203ENST00000397397 A1CFQ9NQ94 594 aaKnown RBP27.09■■□□□ 1.93
TSPAN4-203ENST00000397397 PCDHA4Q9UN74 947 aa27.09■■□□□ 1.93
TSPAN4-203ENST00000397397 IVNS1ABPQ9Y6Y0 642 aa27.09■■□□□ 1.93
TSPAN4-203ENST00000397397 MMP1P03956 469 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms