RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 MAD2L2Q9UI95 211 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 EEF1GP26641 437 aaKnown RBP15.59■□□□□ 0.09
NUP98-204ENST00000397004 SLC7A5Q01650 507 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 KCNB1Q14721 858 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 CTCFLQ8NI51 663 aaPredicted RBP15.59■□□□□ 0.09
NUP98-204ENST00000397004 SEMA6BQ9H3T3 888 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 KAT14Q9H8E8 782 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 RREB1Q92766 1687 aa15.58■□□□□ 0.09
NUP98-204ENST00000397004 CALM1P0DP23 149 aa15.58■□□□□ 0.09
NUP98-204ENST00000397004 CALM2P0DP24 149 aa15.58■□□□□ 0.09
NUP98-204ENST00000397004 CALM3P0DP25 149 aa15.58■□□□□ 0.09
NUP98-204ENST00000397004 ERCC3P19447 782 aa15.58■□□□□ 0.09
NUP98-204ENST00000397004 CXCR5P32302 372 aa15.58■□□□□ 0.09
NUP98-204ENST00000397004 TUBB4BP68371 445 aa15.58■□□□□ 0.09
NUP98-204ENST00000397004 KCTD19Q17RG1 926 aaPredicted RBP15.58■□□□□ 0.09
NUP98-204ENST00000397004 ERFEQ4G0M1 354 aa15.58■□□□□ 0.09
NUP98-204ENST00000397004 TSEN2Q8NCE0 465 aaKnown RBP15.58■□□□□ 0.09
NUP98-204ENST00000397004 PSMB7Q99436 277 aa15.58■□□□□ 0.09
NUP98-204ENST00000397004 MMTAG2Q9BU76 263 aaKnown RBP15.58■□□□□ 0.09
NUP98-204ENST00000397004 PCDHA4Q9UN74 947 aa15.58■□□□□ 0.09
NUP98-204ENST00000397004 PLCG1P19174 1290 aa15.58■□□□□ 0.08
NUP98-204ENST00000397004 TXNRD1Q16881 649 aa15.58■□□□□ 0.08
NUP98-204ENST00000397004 MYH1P12882 1939 aa15.58■□□□□ 0.08
NUP98-204ENST00000397004 TARSL2A2RTX5 802 aaKnown RBP15.58■□□□□ 0.08
NUP98-204ENST00000397004 SHOX2O60902 331 aaPredicted RBP15.58■□□□□ 0.08
NUP98-204ENST00000397004 STIM1Q13586 685 aa15.58■□□□□ 0.08
NUP98-204ENST00000397004 CSGALNACT2Q8N6G5 542 aa15.58■□□□□ 0.08
NUP98-204ENST00000397004 EXOC1Q9NV70 894 aa15.58■□□□□ 0.08
NUP98-204ENST00000397004 RMND1Q9NWS8 449 aa15.58■□□□□ 0.08
NUP98-204ENST00000397004 LAMB1P07942 1786 aa15.58■□□□□ 0.08
NUP98-204ENST00000397004 USP17L3A6NCW0 530 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 USP17L4A6NCW7 530 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 GRIN2DO15399 1336 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 CORO7P57737 925 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 FKBP15Q5T1M5 1219 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 USP17L1Q7RTZ2 530 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 ZSCAN29Q8IWY8 852 aaPredicted RBP15.57■□□□□ 0.08
NUP98-204ENST00000397004 GLIS3Q8NEA6 775 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 CNOT6LQ96LI5 555 aaKnown RBP15.57■□□□□ 0.08
NUP98-204ENST00000397004 GBP3Q9H0R5 595 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 POLD4Q9HCU8 107 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 CWC15Q9P013 229 aaKnown RBP15.57■□□□□ 0.08
NUP98-204ENST00000397004 LAMB2P55268 1798 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 EDIL3O43854 480 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 AFAP1L1Q8TED9 768 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 TRIM9Q9C026 710 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 TSPYL1Q9H0U9 437 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 MKRN1Q9UHC7 482 aaKnown RBP15.57■□□□□ 0.08
NUP98-204ENST00000397004 DNM2P50570 870 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 ATP2B2Q01814 1243 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 TBC1D8BQ0IIM8 1120 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 HSP90B2PQ58FF3 399 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 CCDC155Q8N6L0 562 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 DRC1Q96MC2 740 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 TFCP2L1Q9NZI6 479 aa15.57■□□□□ 0.08
NUP98-204ENST00000397004 NCK2O43639 380 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 IVLP07476 585 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 TRIM21P19474 475 aaKnown RBP15.56■□□□□ 0.08
NUP98-204ENST00000397004 TTC19Q6DKK2 380 aaPredicted RBP15.56■□□□□ 0.08
NUP98-204ENST00000397004 NFRKBQ6P4R8 1299 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 DTHD1Q6ZMT9 781 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 SLC44A5Q8NCS7 719 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 CCDC87Q9NVE4 849 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 IDEP14735 1019 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 GRIK5Q16478 980 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 KIAA1328Q86T90 577 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 MOCS3O95396 460 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 GOLGA8HP0CJ92 632 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 FBXO33Q7Z6M2 555 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 CCSER1Q9C0I3 900 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 SNX12Q9UMY4 172 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 MTMR7Q9Y216 660 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 SIK3Q9Y2K2 1263 aa15.56■□□□□ 0.08
NUP98-204ENST00000397004 STXBP3O00186 592 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 ZBED6P86452 979 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 ACSBG1Q96GR2 724 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 JADE2Q9NQC1 790 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 ADAMTS2O95450 1211 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 CERS3Q8IU89 383 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 P2RX5Q93086 422 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 PPFIA4O75335 1185 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 MAGEA9P43362 315 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 IRAK1P51617 712 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 KCNQ4P56696 695 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 TFAP4Q01664 338 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 ANKRD13CQ8N6S4 541 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 ANKRD20A12PQ8NF67 263 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 ARL8AQ96BM9 186 aa15.55■□□□□ 0.08
NUP98-204ENST00000397004 ZSCAN5CA6NGD5 496 aaPredicted RBP15.54■□□□□ 0.08
NUP98-204ENST00000397004 TSPY2A6NKD2 308 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 EXOC5O00471 708 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 TTMPQ5BVD1 217 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 KRT86O43790 486 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 TUBBP07437 444 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 ATP6V1AP38606 617 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 VAV2P52735 878 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 PNMA1Q8ND90 353 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 SPATA4Q8NEY3 305 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 KAT2BQ92831 832 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 KRT83P78385 493 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms