RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 COA7Q96BR5 231 aa19■□□□□ 0.63
AP1S3-202ENST00000396653 ARHGAP39Q9C0H5 1083 aa19■□□□□ 0.63
AP1S3-202ENST00000396653 CWC22Q9HCG8 908 aaKnown RBP19■□□□□ 0.63
AP1S3-202ENST00000396653 IVNS1ABPQ9Y6Y0 642 aa19■□□□□ 0.63
AP1S3-202ENST00000396653 STK36Q9NRP7 1315 aa19■□□□□ 0.63
AP1S3-202ENST00000396653 PPP1R11O60927 126 aaPredicted RBP18.99■□□□□ 0.63
AP1S3-202ENST00000396653 CD2BP2O95400 341 aaKnown RBP18.99■□□□□ 0.63
AP1S3-202ENST00000396653 PTPREP23469 700 aa18.99■□□□□ 0.63
AP1S3-202ENST00000396653 HOXD10P28358 340 aa18.99■□□□□ 0.63
AP1S3-202ENST00000396653 GRB14Q14449 540 aa18.99■□□□□ 0.63
AP1S3-202ENST00000396653 TRIM22Q8IYM9 498 aa18.99■□□□□ 0.63
AP1S3-202ENST00000396653 CCDC82Q8N4S0 544 aa18.99■□□□□ 0.63
AP1S3-202ENST00000396653 TRERF1Q96PN7 1200 aa18.99■□□□□ 0.63
AP1S3-202ENST00000396653 MRPL11Q9Y3B7 192 aaKnown RBP18.99■□□□□ 0.63
AP1S3-202ENST00000396653 LCTP09848 1927 aa18.99■□□□□ 0.63
AP1S3-202ENST00000396653 SLC15A5A6NIM6 579 aa18.98■□□□□ 0.63
AP1S3-202ENST00000396653 CAP1Q01518 475 aa18.98■□□□□ 0.63
AP1S3-202ENST00000396653 AKAP17AQ02040 695 aaKnown RBP18.98■□□□□ 0.63
AP1S3-202ENST00000396653 ST3GAL1Q11201 340 aa18.98■□□□□ 0.63
AP1S3-202ENST00000396653 USH1GQ495M9 461 aa18.98■□□□□ 0.63
AP1S3-202ENST00000396653 MORN1Q5T089 497 aa18.98■□□□□ 0.63
AP1S3-202ENST00000396653 WDR78Q5VTH9 848 aa18.98■□□□□ 0.63
AP1S3-202ENST00000396653 PCDHA1Q9Y5I3 950 aa18.98■□□□□ 0.63
AP1S3-202ENST00000396653 FCER1AP12319 257 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 SLC4A3P48751 1232 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 SSRP1Q08945 709 aaKnown RBP18.97■□□□□ 0.63
AP1S3-202ENST00000396653 KCTD2Q14681 263 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 PFKFB3Q16875 520 aaPredicted RBP18.97■□□□□ 0.63
AP1S3-202ENST00000396653 PPP1R18Q6NYC8 613 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 OTOP1Q7RTM1 612 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 NECAB1Q8N987 351 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 CLEC4DQ8WXI8 215 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 PHKBQ93100 1093 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 SNX21Q969T3 373 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 TMX3Q96JJ7 454 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 MMP19Q99542 508 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 NUDT12Q9BQG2 462 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 LLPHQ9BRT6 129 aaKnown RBP18.97■□□□□ 0.63
AP1S3-202ENST00000396653 SLC26A6Q9BXS9 759 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 HOMER2Q9NSB8 354 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 SRRDQ9UH36 339 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 V9GY48 417 aaPredicted RBP18.97■□□□□ 0.63
AP1S3-202ENST00000396653 PFASO15067 1338 aa18.97■□□□□ 0.63
AP1S3-202ENST00000396653 DEXIO95424 95 aa18.96■□□□□ 0.63
AP1S3-202ENST00000396653 CTDNEP1O95476 244 aa18.96■□□□□ 0.63
AP1S3-202ENST00000396653 SCG2P13521 617 aa18.96■□□□□ 0.63
AP1S3-202ENST00000396653 TAL1P17542 331 aaPredicted RBP18.96■□□□□ 0.63
AP1S3-202ENST00000396653 GHRHRQ02643 423 aa18.96■□□□□ 0.63
AP1S3-202ENST00000396653 MUM1L1Q5H9M0 696 aa18.96■□□□□ 0.63
AP1S3-202ENST00000396653 CTU1Q7Z7A3 348 aaKnown RBP18.96■□□□□ 0.63
AP1S3-202ENST00000396653 TEX2Q8IWB9 1127 aa18.96■□□□□ 0.63
AP1S3-202ENST00000396653 SAMD3Q8N6K7 520 aa18.96■□□□□ 0.63
AP1S3-202ENST00000396653 RGS22Q8NE09 1264 aa18.96■□□□□ 0.63
AP1S3-202ENST00000396653 NSUN7Q8NE18 718 aaKnown RBP18.96■□□□□ 0.63
AP1S3-202ENST00000396653 PIBF1Q8WXW3 757 aa18.96■□□□□ 0.63
AP1S3-202ENST00000396653 USP6NLQ92738 828 aa18.96■□□□□ 0.63
AP1S3-202ENST00000396653 GJD2Q9UKL4 321 aa18.96■□□□□ 0.63
AP1S3-202ENST00000396653 TRIM17Q9Y577 477 aa18.96■□□□□ 0.63
AP1S3-202ENST00000396653 HOXC6P09630 235 aa18.95■□□□□ 0.62
AP1S3-202ENST00000396653 RGS2P41220 211 aa18.95■□□□□ 0.62
AP1S3-202ENST00000396653 MAP2K5Q13163 448 aa18.95■□□□□ 0.62
AP1S3-202ENST00000396653 IRF5Q13568 498 aa18.95■□□□□ 0.62
AP1S3-202ENST00000396653 PKN1Q16512 942 aa18.95■□□□□ 0.62
AP1S3-202ENST00000396653 MCF2L2Q86YR7 1114 aa18.95■□□□□ 0.62
AP1S3-202ENST00000396653 CCDC83Q8IWF9 413 aa18.95■□□□□ 0.62
AP1S3-202ENST00000396653 FAM177A1Q8N128 213 aaPredicted RBP18.95■□□□□ 0.62
AP1S3-202ENST00000396653 A1CFQ9NQ94 594 aaKnown RBP18.95■□□□□ 0.62
AP1S3-202ENST00000396653 BARHL2Q9NY43 387 aa18.95■□□□□ 0.62
AP1S3-202ENST00000396653 MAP3K20Q9NYL2 800 aaKnown RBP18.95■□□□□ 0.62
AP1S3-202ENST00000396653 DNAJC25-GNG10A0A024R161 153 aa18.94■□□□□ 0.62
AP1S3-202ENST00000396653 hCG_1642624A0A1W2PR95 340 aa18.94■□□□□ 0.62
AP1S3-202ENST00000396653 NFIBO00712 420 aa18.94■□□□□ 0.62
AP1S3-202ENST00000396653 ADORA2AP29274 412 aa18.94■□□□□ 0.62
AP1S3-202ENST00000396653 PRKCZQ05513 592 aa18.94■□□□□ 0.62
AP1S3-202ENST00000396653 WWC2Q6AWC2 1192 aa18.94■□□□□ 0.62
AP1S3-202ENST00000396653 HEATR3Q7Z4Q2 680 aa18.94■□□□□ 0.62
AP1S3-202ENST00000396653 ANKRD35Q8N283 1001 aa18.94■□□□□ 0.62
AP1S3-202ENST00000396653 APBA2Q99767 749 aa18.94■□□□□ 0.62
AP1S3-202ENST00000396653 SLC5A4Q9NY91 659 aa18.94■□□□□ 0.62
AP1S3-202ENST00000396653 PTPDC1A2A3K4 754 aa18.93■□□□□ 0.62
AP1S3-202ENST00000396653 OPLAHO14841 1288 aa18.93■□□□□ 0.62
AP1S3-202ENST00000396653 ECM2O94769 699 aaPredicted RBP18.93■□□□□ 0.62
AP1S3-202ENST00000396653 XRCC5P13010 732 aaKnown RBP18.93■□□□□ 0.62
AP1S3-202ENST00000396653 FLT3LGP49771 235 aa18.93■□□□□ 0.62
AP1S3-202ENST00000396653 PKN2Q16513 984 aaKnown RBP18.93■□□□□ 0.62
AP1S3-202ENST00000396653 SMARCC2Q8TAQ2 1214 aa18.93■□□□□ 0.62
AP1S3-202ENST00000396653 CCDC12Q8WUD4 166 aaPredicted RBP18.93■□□□□ 0.62
AP1S3-202ENST00000396653 WASF1Q92558 559 aa18.93■□□□□ 0.62
AP1S3-202ENST00000396653 GPKOWQ92917 476 aaPredicted RBP eCLIP18.93■□□□□ 0.62
AP1S3-202ENST00000396653 DDX11Q96FC9 970 aa18.93■□□□□ 0.62
AP1S3-202ENST00000396653 CYP39A1Q9NYL5 469 aa18.93■□□□□ 0.62
AP1S3-202ENST00000396653 GABRQQ9UN88 632 aa18.93■□□□□ 0.62
AP1S3-202ENST00000396653 DIS3Q9Y2L1 958 aaKnown RBP18.93■□□□□ 0.62
AP1S3-202ENST00000396653 ESYT2A0FGR8 921 aa18.92■□□□□ 0.62
AP1S3-202ENST00000396653 K7ELQ4 463 aaPredicted RBP18.92■□□□□ 0.62
AP1S3-202ENST00000396653 STXBP3O00186 592 aa18.92■□□□□ 0.62
AP1S3-202ENST00000396653 NAPAP54920 295 aa18.92■□□□□ 0.62
AP1S3-202ENST00000396653 HMGN5P82970 282 aaKnown RBP18.92■□□□□ 0.62
AP1S3-202ENST00000396653 NSMFQ6X4W1 530 aa18.92■□□□□ 0.62
AP1S3-202ENST00000396653 RNF207Q6ZRF8 634 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms