RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 CARSP49589 748 aaKnown RBP11.23□□□□□ -0.61
COL4A4-201ENST00000396625 PRXQ9BXM0 1461 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 ADAMTS2O95450 1211 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 PIK3CAP42336 1068 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 FOXD4Q12950 439 aaPredicted RBP11.23□□□□□ -0.61
COL4A4-201ENST00000396625 NBPF10Q6P3W6 841 aaKnown RBP11.23□□□□□ -0.61
COL4A4-201ENST00000396625 METTL13Q8N6R0 699 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 TRPC5Q9UL62 973 aaPredicted RBP11.23□□□□□ -0.61
COL4A4-201ENST00000396625 SBNO1A3KN83 1393 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 FAM95CA0A1B0GW59 222 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 H0YC42 278 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 HNRNPCP07910 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL4A4-201ENST00000396625 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 GUCY2CP25092 1073 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 GIPC2Q8TF65 315 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 UBN1Q9NPG3 1134 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 ZSCAN32Q9NX65 697 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 TYW5A2RUC4 315 aaKnown RBP11.23□□□□□ -0.61
COL4A4-201ENST00000396625 DDX42Q86XP3 938 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL4A4-201ENST00000396625 BLZF1Q9H2G9 400 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 DDX28Q9NUL7 540 aaKnown RBP11.23□□□□□ -0.61
COL4A4-201ENST00000396625 SERPINB10P48595 397 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 DYNC1I2Q13409 638 aaKnown RBP11.22□□□□□ -0.61
COL4A4-201ENST00000396625 ARHGEF18Q6ZSZ5 1173 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 AFAP1Q8N556 730 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 TMEM247A6NEH6 219 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 EXOC5O00471 708 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 NSFP46459 744 aaKnown RBP11.22□□□□□ -0.61
COL4A4-201ENST00000396625 TRIM8Q9BZR9 551 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 BICC1Q9H694 974 aaKnown RBP11.22□□□□□ -0.61
COL4A4-201ENST00000396625 KIF9Q9HAQ2 790 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 RASGRF2O14827 1237 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 HDAC4P56524 1084 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 NELFCDQ8IXH7 590 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 XAGE3Q8WTP9 111 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 ARHGAP45Q92619 1136 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 SPATA17Q96L03 361 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 CFLARO15519 480 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 BLVRAP53004 296 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 DYMQ7RTS9 669 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 UHMK1Q8TAS1 419 aaKnown RBP11.22□□□□□ -0.61
COL4A4-201ENST00000396625 ITM2BQ9Y287 266 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 SYNJ2BP-COX16A0A087WUM0 186 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 PRR23D1E9PI22 279 aaPredicted RBP11.22□□□□□ -0.61
COL4A4-201ENST00000396625 PRR23D2P0DMB1 279 aaPredicted RBP11.22□□□□□ -0.61
COL4A4-201ENST00000396625 KPNA2P52292 529 aaKnown RBP11.22□□□□□ -0.61
COL4A4-201ENST00000396625 DMP1Q13316 513 aaPredicted RBP11.22□□□□□ -0.61
COL4A4-201ENST00000396625 PUM3Q15397 648 aaKnown RBP11.22□□□□□ -0.61
COL4A4-201ENST00000396625 ANKRD44Q8N8A2 993 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 COX16Q9P0S2 106 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 SLFN14P0C7P3 912 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 LZTS2Q9BRK4 669 aa11.22□□□□□ -0.61
COL4A4-201ENST00000396625 ACTR5Q9H9F9 607 aaPredicted RBP11.22□□□□□ -0.61
COL4A4-201ENST00000396625 NCOA5Q9HCD5 579 aaKnown RBP11.22□□□□□ -0.61
COL4A4-201ENST00000396625 RPRD2Q5VT52 1461 aaKnown RBP11.22□□□□□ -0.61
COL4A4-201ENST00000396625 TMEM232C9JQI7 657 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 TRPC1P48995 793 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 RINLQ6ZS11 566 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 RNF169Q8NCN4 708 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 UIMC1Q96RL1 719 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 CFAP36Q96G28 342 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 USP26Q9BXU7 913 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.21□□□□□ -0.61
COL4A4-201ENST00000396625 MSH2P43246 934 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 SPOPLQ6IQ16 392 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 SLC24A3Q9HC58 644 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 H7C0C1 242 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 ATP5OP48047 213 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 YWHAHQ04917 246 aaPredicted RBP11.21□□□□□ -0.61
COL4A4-201ENST00000396625 SZRD1Q7Z422 152 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 RABGGTAQ92696 567 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 MMS19Q96T76 1030 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 NOP53Q9NZM5 478 aaKnown RBP11.21□□□□□ -0.61
COL4A4-201ENST00000396625 B4E1Z4 1266 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 E2F6O75461 281 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 OCRLQ01968 901 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 TFCP2Q12800 502 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 RBM26Q5T8P6 1007 aaKnown RBP11.21□□□□□ -0.61
COL4A4-201ENST00000396625 ZNF148Q9UQR1 794 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 ZNF711Q9Y462 761 aa11.21□□□□□ -0.61
COL4A4-201ENST00000396625 IBTKQ9P2D0 1353 aaPredicted RBP11.21□□□□□ -0.62
COL4A4-201ENST00000396625 FBXW4P57775 412 aa11.21□□□□□ -0.62
COL4A4-201ENST00000396625 ZNF445P59923 1031 aa11.21□□□□□ -0.62
COL4A4-201ENST00000396625 KIF19Q2TAC6 998 aa11.21□□□□□ -0.62
COL4A4-201ENST00000396625 OR8K1Q8NGG5 319 aa11.21□□□□□ -0.62
COL4A4-201ENST00000396625 LZICQ8WZA0 190 aa11.21□□□□□ -0.62
COL4A4-201ENST00000396625 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.21□□□□□ -0.62
COL4A4-201ENST00000396625 ZNF215Q9UL58 517 aaPredicted RBP11.21□□□□□ -0.62
COL4A4-201ENST00000396625 PRG4Q92954 1404 aaPredicted RBP11.21□□□□□ -0.62
COL4A4-201ENST00000396625 EPHB4P54760 987 aa11.21□□□□□ -0.62
COL4A4-201ENST00000396625 ADCY1Q08828 1119 aa11.21□□□□□ -0.62
COL4A4-201ENST00000396625 ZC3H12BQ5HYM0 836 aaKnown RBP11.21□□□□□ -0.62
COL4A4-201ENST00000396625 SESTD1Q86VW0 696 aa11.21□□□□□ -0.62
COL4A4-201ENST00000396625 REXO1Q8N1G1 1221 aaKnown RBP11.21□□□□□ -0.62
COL4A4-201ENST00000396625 CDC26Q8NHZ8 85 aa11.21□□□□□ -0.62
COL4A4-201ENST00000396625 PGBD1Q96JS3 809 aa11.21□□□□□ -0.62
COL4A4-201ENST00000396625 HEXIM1O94992 359 aaKnown RBP11.21□□□□□ -0.62
COL4A4-201ENST00000396625 ABCC5O15440 1437 aa11.21□□□□□ -0.62
COL4A4-201ENST00000396625 NBNO60934 754 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 MBD4O95243 580 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms