RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 SPA17Q15506 151 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 SLC16A10Q8TF71 515 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 PIGBQ92521 554 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 CCDC42Q96M95 316 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 NACAP1Q9BZK3 213 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 RWDD2AQ9UIY3 292 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 VEGFAP15692 232 aaPredicted RBP10.98□□□□□ -0.65
TRIM39-203ENST00000396547 HPDP32754 393 aaPredicted RBP10.98□□□□□ -0.65
TRIM39-203ENST00000396547 UBE3CQ15386 1083 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 RASGRP4Q8TDF6 673 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 FAM212AQ96EL1 285 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 TNKSO95271 1327 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 ZC3H4Q9UPT8 1303 aaKnown RBP10.98□□□□□ -0.65
TRIM39-203ENST00000396547 KIAA1551Q9HCM1 1747 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 ANKRD18BA2A2Z9 1011 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 SEC24CP53992 1094 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 SH3RF1Q7Z6J0 888 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 ELOA2Q8IYF1 753 aaPredicted RBP10.98□□□□□ -0.65
TRIM39-203ENST00000396547 MS4A14Q96JA4 679 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 CXorf56Q9H5V9 222 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 CNNM2Q9H8M5 875 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 CD248Q9HCU0 757 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 FAM184BQ9ULE4 1060 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 MYH14Q7Z406 1995 aaKnown RBP10.97□□□□□ -0.65
TRIM39-203ENST00000396547 BACH1O14867 736 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 ADAMTS3O15072 1205 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 EIF3HO15372 352 aaKnown RBP eCLIP10.97□□□□□ -0.65
TRIM39-203ENST00000396547 BUB1O43683 1085 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 ECM2O94769 699 aaPredicted RBP10.97□□□□□ -0.65
TRIM39-203ENST00000396547 PTPROQ16827 1216 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 PROCA1Q8NCQ7 364 aaPredicted RBP10.97□□□□□ -0.65
TRIM39-203ENST00000396547 FLAD1Q8NFF5 587 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 FAM207AQ9NSI2 230 aaPredicted RBP10.97□□□□□ -0.65
TRIM39-203ENST00000396547 TRMT112Q9UI30 125 aaKnown RBP10.97□□□□□ -0.65
TRIM39-203ENST00000396547 ITIH6Q6UXX5 1313 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 STK36Q9NRP7 1315 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 ZSCAN5CA6NGD5 496 aaPredicted RBP10.97□□□□□ -0.65
TRIM39-203ENST00000396547 TRIM14Q14142 442 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 SLC15A2Q16348 729 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 KCNV1Q6PIU1 500 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 IRF2BP1Q8IU81 584 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 MSL3Q8N5Y2 521 aaKnown RBP10.97□□□□□ -0.65
TRIM39-203ENST00000396547 CSGALNACT2Q8N6G5 542 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 SPATA5Q8NB90 893 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 RIPOR2Q9Y4F9 1068 aa10.97□□□□□ -0.65
TRIM39-203ENST00000396547 SEMA3EO15041 775 aa10.96□□□□□ -0.65
TRIM39-203ENST00000396547 AKR1B10O60218 316 aa10.96□□□□□ -0.65
TRIM39-203ENST00000396547 ACTN3Q08043 901 aaPredicted RBP10.96□□□□□ -0.65
TRIM39-203ENST00000396547 NNTQ13423 1086 aa10.96□□□□□ -0.65
TRIM39-203ENST00000396547 IFIT1BQ5T764 474 aaKnown RBP10.96□□□□□ -0.65
TRIM39-203ENST00000396547 ZNF658Q5TYW1 1059 aaPredicted RBP10.96□□□□□ -0.65
TRIM39-203ENST00000396547 PAPD7Q5XG87 772 aaKnown RBP10.96□□□□□ -0.65
TRIM39-203ENST00000396547 KIF6Q6ZMV9 814 aa10.96□□□□□ -0.65
TRIM39-203ENST00000396547 C2CD5Q86YS7 1000 aa10.96□□□□□ -0.65
TRIM39-203ENST00000396547 HPS3Q969F9 1004 aa10.96□□□□□ -0.65
TRIM39-203ENST00000396547 FERMT2Q96AC1 680 aa10.96□□□□□ -0.65
TRIM39-203ENST00000396547 CCDC43Q96MW1 224 aaKnown RBP10.96□□□□□ -0.65
TRIM39-203ENST00000396547 CAPN6Q9Y6Q1 641 aa10.96□□□□□ -0.65
TRIM39-203ENST00000396547 FAM170AA1A519 330 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 GTPBP6O43824 516 aaPredicted RBP10.96□□□□□ -0.66
TRIM39-203ENST00000396547 OPA1O60313 960 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 IFT88Q13099 833 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 HLFQ16534 295 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 CCDC178Q5BJE1 867 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 CEP57Q86XR8 500 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 TUBGCP2Q9BSJ2 902 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 MMRN2Q9H8L6 949 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 PPANQ9NQ55 473 aaKnown RBP10.96□□□□□ -0.66
TRIM39-203ENST00000396547 LRRC4BQ9NT99 713 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 NKRFO15226 690 aaKnown RBP eCLIP10.96□□□□□ -0.66
TRIM39-203ENST00000396547 TACC1O75410 805 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 RDXP35241 583 aaKnown RBP10.96□□□□□ -0.66
TRIM39-203ENST00000396547 BCAMP50895 628 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 TTMPQ5BVD1 217 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 IQCEQ6IPM2 695 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 MAATS1Q7Z4T9 603 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 CATIPQ7Z7H3 387 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 SPATA4Q8NEY3 305 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 CNKSR2Q8WXI2 1034 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 TMOD3Q9NYL9 352 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 NFU1Q9UMS0 254 aa10.96□□□□□ -0.66
TRIM39-203ENST00000396547 KAT6BQ8WYB5 2073 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 LRRC10BA6NIK2 292 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 H7C1D1 291 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 NMT2O60551 498 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 PDE8BO95263 885 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 CYP7A1P22680 504 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 PAFAH1B1P43034 410 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 RASGRF1Q13972 1273 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 PKN1Q16512 942 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 IL17AQ16552 155 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 GBP6Q6ZN66 633 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 TMC4Q7Z404 712 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 EHBP1Q8NDI1 1231 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 ZIM3Q96PE6 472 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 SGIP1Q9BQI5 828 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 NOC4LQ9BVI4 516 aaKnown RBP10.95□□□□□ -0.66
TRIM39-203ENST00000396547 IFIH1Q9BYX4 1025 aaKnown RBP10.95□□□□□ -0.66
TRIM39-203ENST00000396547 AFDNP55196 1824 aaKnown RBP10.95□□□□□ -0.66
TRIM39-203ENST00000396547 TARSL2A2RTX5 802 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms