RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 TLK2Q86UE8 772 aa20.77■□□□□ 0.92
EXOSC3-202ENST00000396521 TRERF1Q96PN7 1200 aa20.77■□□□□ 0.92
EXOSC3-202ENST00000396521 PPP1R12CQ9BZL4 782 aa20.77■□□□□ 0.92
EXOSC3-202ENST00000396521 HIPK3Q9H422 1215 aa20.77■□□□□ 0.92
EXOSC3-202ENST00000396521 ISY1Q9ULR0 285 aaKnown RBP20.77■□□□□ 0.92
EXOSC3-202ENST00000396521 M0R2C6 588 aa20.76■□□□□ 0.91
EXOSC3-202ENST00000396521 TNFRSF10AO00220 468 aa20.76■□□□□ 0.91
EXOSC3-202ENST00000396521 PPARAQ07869 468 aa20.76■□□□□ 0.91
EXOSC3-202ENST00000396521 CXCL17Q6UXB2 119 aa20.76■□□□□ 0.91
EXOSC3-202ENST00000396521 SLC28A3Q9HAS3 691 aa20.76■□□□□ 0.91
EXOSC3-202ENST00000396521 VTA1Q9NP79 307 aa20.76■□□□□ 0.91
EXOSC3-202ENST00000396521 ZNF536O15090 1300 aa20.76■□□□□ 0.91
EXOSC3-202ENST00000396521 SOWAHBA6NEL2 793 aa20.75■□□□□ 0.91
EXOSC3-202ENST00000396521 CYP2C18P33260 490 aa20.75■□□□□ 0.91
EXOSC3-202ENST00000396521 IRX5P78411 483 aaPredicted RBP20.75■□□□□ 0.91
EXOSC3-202ENST00000396521 USP38Q8NB14 1042 aa20.75■□□□□ 0.91
EXOSC3-202ENST00000396521 AGBL1Q96MI9 1066 aa20.75■□□□□ 0.91
EXOSC3-202ENST00000396521 ADD3Q9UEY8 706 aaKnown RBP20.75■□□□□ 0.91
EXOSC3-202ENST00000396521 PNMA2Q9UL42 364 aa20.75■□□□□ 0.91
EXOSC3-202ENST00000396521 DYNC1LI2O43237 492 aaPredicted RBP20.74■□□□□ 0.91
EXOSC3-202ENST00000396521 PFKMP08237 780 aa20.74■□□□□ 0.91
EXOSC3-202ENST00000396521 SUPT20HL2P0C7V6 817 aa20.74■□□□□ 0.91
EXOSC3-202ENST00000396521 ACRP10323 421 aa20.74■□□□□ 0.91
EXOSC3-202ENST00000396521 ALAS1P13196 640 aa20.74■□□□□ 0.91
EXOSC3-202ENST00000396521 MCCP23508 829 aa20.74■□□□□ 0.91
EXOSC3-202ENST00000396521 PBX2P40425 430 aa20.74■□□□□ 0.91
EXOSC3-202ENST00000396521 BEX3Q00994 111 aa20.74■□□□□ 0.91
EXOSC3-202ENST00000396521 DIEXFQ68CQ4 756 aaKnown RBP20.74■□□□□ 0.91
EXOSC3-202ENST00000396521 MORC4Q8TE76 937 aa20.74■□□□□ 0.91
EXOSC3-202ENST00000396521 TSPYL2Q9H2G4 693 aaPredicted RBP20.74■□□□□ 0.91
EXOSC3-202ENST00000396521 THEGQ9P2T0 379 aa20.74■□□□□ 0.91
EXOSC3-202ENST00000396521 STX8Q9UNK0 236 aa20.74■□□□□ 0.91
EXOSC3-202ENST00000396521 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.73■□□□□ 0.91
EXOSC3-202ENST00000396521 TSPY2A6NKD2 308 aa20.73■□□□□ 0.91
EXOSC3-202ENST00000396521 GRXCR1A8MXD5 290 aa20.73■□□□□ 0.91
EXOSC3-202ENST00000396521 MRPS5P82675 430 aaKnown RBP20.73■□□□□ 0.91
EXOSC3-202ENST00000396521 ZMYM1Q5SVZ6 1142 aa20.73■□□□□ 0.91
EXOSC3-202ENST00000396521 ASB2Q96Q27 587 aa20.73■□□□□ 0.91
EXOSC3-202ENST00000396521 PRDM12Q9H4Q4 367 aa20.73■□□□□ 0.91
EXOSC3-202ENST00000396521 CYP39A1Q9NYL5 469 aa20.73■□□□□ 0.91
EXOSC3-202ENST00000396521 ASTN1O14525 1302 aa20.73■□□□□ 0.91
EXOSC3-202ENST00000396521 SMPD1P17405 629 aa20.72■□□□□ 0.91
EXOSC3-202ENST00000396521 FSD1Q9BTV5 496 aa20.72■□□□□ 0.91
EXOSC3-202ENST00000396521 NOC4LQ9BVI4 516 aaKnown RBP20.72■□□□□ 0.91
EXOSC3-202ENST00000396521 POLR3EQ9NVU0 708 aa20.72■□□□□ 0.91
EXOSC3-202ENST00000396521 PRR12Q9ULL5 1215 aa20.72■□□□□ 0.91
EXOSC3-202ENST00000396521 MUC3AQ02505 3323 aa20.71■□□□□ 0.91
EXOSC3-202ENST00000396521 ICAM1P05362 532 aa20.71■□□□□ 0.91
EXOSC3-202ENST00000396521 DUSP28Q4G0W2 176 aa20.71■□□□□ 0.91
EXOSC3-202ENST00000396521 BRDTQ58F21 947 aaPredicted RBP20.71■□□□□ 0.91
EXOSC3-202ENST00000396521 TAPT1Q6NXT6 567 aa20.71■□□□□ 0.91
EXOSC3-202ENST00000396521 IL27Q8NEV9 243 aa20.71■□□□□ 0.91
EXOSC3-202ENST00000396521 DCAF4Q8WV16 495 aa20.71■□□□□ 0.91
EXOSC3-202ENST00000396521 MPHOSPH6Q99547 160 aaKnown RBP20.71■□□□□ 0.91
EXOSC3-202ENST00000396521 CCPG1Q9ULG6 757 aa20.71■□□□□ 0.91
EXOSC3-202ENST00000396521 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.71■□□□□ 0.91
EXOSC3-202ENST00000396521 SLC4A7Q9Y6M7 1214 aa20.71■□□□□ 0.91
EXOSC3-202ENST00000396521 NOVP48745 357 aa20.7■□□□□ 0.9
EXOSC3-202ENST00000396521 CPT1AP50416 773 aa20.7■□□□□ 0.9
EXOSC3-202ENST00000396521 TSHZ3Q63HK5 1081 aa20.7■□□□□ 0.9
EXOSC3-202ENST00000396521 KIAA1211Q6ZU35 1233 aa20.7■□□□□ 0.9
EXOSC3-202ENST00000396521 KCTD1Q719H9 257 aa20.7■□□□□ 0.9
EXOSC3-202ENST00000396521 OTOP2Q7RTS6 562 aa20.7■□□□□ 0.9
EXOSC3-202ENST00000396521 TICAM2Q86XR7 235 aa20.7■□□□□ 0.9
EXOSC3-202ENST00000396521 CXXC1Q9P0U4 656 aaPredicted RBP20.7■□□□□ 0.9
EXOSC3-202ENST00000396521 ANAPC4Q9UJX5 808 aa20.7■□□□□ 0.9
EXOSC3-202ENST00000396521 PCDHA11Q9Y5I1 949 aa20.7■□□□□ 0.9
EXOSC3-202ENST00000396521 GRIN2DO15399 1336 aa20.7■□□□□ 0.9
EXOSC3-202ENST00000396521 B4GALT4O60513 344 aa20.69■□□□□ 0.9
EXOSC3-202ENST00000396521 C20orf194Q5TEA3 1177 aa20.69■□□□□ 0.9
EXOSC3-202ENST00000396521 BTNL9Q6UXG8 535 aa20.69■□□□□ 0.9
EXOSC3-202ENST00000396521 PI4K2BQ8TCG2 481 aa20.69■□□□□ 0.9
EXOSC3-202ENST00000396521 TRPV6Q9H1D0 765 aa20.69■□□□□ 0.9
EXOSC3-202ENST00000396521 ALDH8A1Q9H2A2 487 aaPredicted RBP20.69■□□□□ 0.9
EXOSC3-202ENST00000396521 NCOR1O75376 2440 aa20.69■□□□□ 0.9
EXOSC3-202ENST00000396521 MYH4Q9Y623 1939 aa20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 CHD9Q3L8U1 2897 aa20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 ORC4O43929 436 aa20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 KPNA6O60684 536 aa20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 IGFBP4P22692 258 aa20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 CCL23P55773 120 aa20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 NSMFQ6X4W1 530 aa20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 PPM1EQ8WY54 764 aa20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 SEC62Q99442 399 aaKnown RBP20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 RANBP17Q9H2T7 1088 aaKnown RBP20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 NKX2-4Q9H2Z4 354 aa20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 GPHNQ9NQX3 736 aaPredicted RBP20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 PDGFCQ9NRA1 345 aa20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 IL17RBQ9NRM6 502 aa20.68■□□□□ 0.9
EXOSC3-202ENST00000396521 B4DLN1 442 aa20.67■□□□□ 0.9
EXOSC3-202ENST00000396521 NKRFO15226 690 aaKnown RBP eCLIP20.67■□□□□ 0.9
EXOSC3-202ENST00000396521 RANBP6O60518 1105 aaKnown RBP20.67■□□□□ 0.9
EXOSC3-202ENST00000396521 RFC2P35250 354 aa20.67■□□□□ 0.9
EXOSC3-202ENST00000396521 MRPL12P52815 198 aaKnown RBP20.67■□□□□ 0.9
EXOSC3-202ENST00000396521 ADGRE1Q14246 886 aa20.67■□□□□ 0.9
EXOSC3-202ENST00000396521 AAK1Q2M2I8 961 aa20.67■□□□□ 0.9
EXOSC3-202ENST00000396521 MUM1L1Q5H9M0 696 aa20.67■□□□□ 0.9
EXOSC3-202ENST00000396521 FBXO16Q8IX29 292 aaPredicted RBP20.67■□□□□ 0.9
EXOSC3-202ENST00000396521 WDR11Q9BZH6 1224 aa20.67■□□□□ 0.9
EXOSC3-202ENST00000396521 RAD50Q92878 1312 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms