RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 SLC1A4P43007 532 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 IL17AQ16552 155 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 KCTD1Q719H9 257 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 CLEC10AQ8IUN9 316 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 ZNF713Q8N859 430 aaPredicted RBP12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 NOC3LQ8WTT2 800 aaKnown RBP12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 UIMC1Q96RL1 719 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 MORC2Q9Y6X9 1032 aaPredicted RBP12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 PPP1R2P41236 205 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 PPP2R3AQ06190 1150 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 TBC1D8BQ0IIM8 1120 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 NOC4LQ9BVI4 516 aaKnown RBP12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 DEF6Q9H4E7 631 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 KCND1Q9NSA2 647 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 MTMR4Q9NYA4 1195 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 OGFRQ9NZT2 677 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 MYH13Q9UKX3 1938 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 EPS15P42566 896 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 DDR1Q08345 913 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 E2F4Q16254 413 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 CRY2Q49AN0 593 aa12.95□□□□□ -0.34
PDXDC1-202ENST00000396410 ZNF76P36508 570 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 PRPHP41219 470 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 ZNF771Q7L3S4 317 aaPredicted RBP12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 POTEDQ86YR6 584 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 CCSER1Q9C0I3 900 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 TMOD2Q9NZR1 351 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 MYH6P13533 1939 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 CTAGE9A4FU28 777 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 ADAMTS3O15072 1205 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 MTF1Q14872 753 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 SLF1Q9BQI6 1058 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 PSTPIP2Q9H939 334 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 PODXL2Q9NZ53 605 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 LAMB2P55268 1798 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 POLRMTO00411 1230 aaKnown RBP12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 MMP10P09238 476 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 PDHBP11177 359 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 UBE2SQ16763 222 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 SLC39A2Q9NP94 309 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 H0YIN7 160 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 GUCA1BQ9UMX6 200 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 BCORQ6W2J9 1755 aa12.94□□□□□ -0.34
PDXDC1-202ENST00000396410 EEF1GP26641 437 aaKnown RBP12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 CACNB3P54284 484 aa12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 RHBDL3P58872 404 aa12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 TBX2Q13207 712 aaPredicted RBP12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 GPATCH4Q5T3I0 446 aaKnown RBP12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 C2CD5Q86YS7 1000 aa12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 DHTKD1Q96HY7 919 aaPredicted RBP12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 ROBO3Q96MS0 1386 aa12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 PNMA6FA0A0J9YX94 578 aa12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 BMS1Q14692 1282 aaKnown RBP12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 CDKAL1Q5VV42 579 aa12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 REXO1L1PQ8IX06 675 aa12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 LIMA1Q9UHB6 759 aaKnown RBP12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 DDX25Q9UHL0 483 aaKnown RBP12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 SUGT1Q9Y2Z0 365 aa12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 CERKLQ49MI3 558 aaPredicted RBP12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 KRT222Q8N1A0 295 aa12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 P2RX5Q93086 422 aa12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 MASTLQ96GX5 879 aa12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 PUF60Q9UHX1 559 aaKnown RBP12.93□□□□□ -0.34
PDXDC1-202ENST00000396410 HOXA10P31260 410 aaPredicted RBP12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 SPA17Q15506 151 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 CAGE1Q8TC20 777 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 GOLGA1Q92805 767 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 FAM163AQ96GL9 167 aaPredicted RBP12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 B4DLN1 442 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 CYLC1P35663 651 aaPredicted RBP12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 DNM2P50570 870 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 ADSSL1Q8N142 457 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 OR8K1Q8NGG5 319 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 LARP4BQ92615 738 aaKnown RBP12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 TUBGCP2Q9BSJ2 902 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 CRKP46108 304 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 NAP1L1P55209 391 aaKnown RBP12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 KCNB1Q14721 858 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 CCDC40Q4G0X9 1142 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 CACNA2D4Q7Z3S7 1137 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 ADGRF4Q8IZF3 695 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 CCDC17Q96LX7 622 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 THAP9Q9H5L6 903 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 SMARCA1P28370 1054 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 MCM6Q14566 821 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 ACRBPQ8NEB7 543 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 FLAD1Q8NFF5 587 aa12.92□□□□□ -0.34
PDXDC1-202ENST00000396410 FAM196BA6NMK8 535 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 TDP2O95551 362 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 FBXO38Q6PIJ6 1188 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 CNOT6LQ96LI5 555 aaKnown RBP12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 NAP1L4Q99733 375 aaKnown RBP12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 MMRN2Q9H8L6 949 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 ABHD10Q9NUJ1 306 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 PCDHA12Q9UN75 941 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 BTAF1O14981 1849 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 EFCAB8A8MWE9 144 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 CCNE1P24864 410 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 FXR1P51114 621 aaKnown RBP eCLIP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms