RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 ATAD5Q96QE3 1844 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 RAB11FIP3O75154 756 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 THBS1P07996 1170 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 LACTBP83111 547 aaPredicted RBP7.46□□□□□ -1.22
PTPN20-208ENST00000395727 DBN1Q16643 649 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 LCE2CQ5TA81 110 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 C17orf99Q6UX52 265 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 FASTKD5Q7L8L6 764 aaKnown RBP7.46□□□□□ -1.22
PTPN20-208ENST00000395727 ZSCAN29Q8IWY8 852 aaPredicted RBP7.46□□□□□ -1.22
PTPN20-208ENST00000395727 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.46□□□□□ -1.22
PTPN20-208ENST00000395727 RHPN1Q8TCX5 695 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 CD99L2Q8TCZ2 262 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 GMCL1Q96IK5 515 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 PARK7Q99497 189 aaKnown RBP7.46□□□□□ -1.22
PTPN20-208ENST00000395727 NOL10Q9BSC4 688 aaKnown RBP7.46□□□□□ -1.22
PTPN20-208ENST00000395727 EFCC1Q9HA90 598 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 GPAMQ9HCL2 828 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 PICK1Q9NRD5 415 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 TLR7Q9NYK1 1049 aaKnown RBP7.46□□□□□ -1.22
PTPN20-208ENST00000395727 CXXC1Q9P0U4 656 aaPredicted RBP7.46□□□□□ -1.22
PTPN20-208ENST00000395727 AFG3L2Q9Y4W6 797 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 TRIM17Q9Y577 477 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 FLT1P17948 1338 aa7.46□□□□□ -1.22
PTPN20-208ENST00000395727 MYO5AQ9Y4I1 1855 aaKnown RBP7.45□□□□□ -1.22
PTPN20-208ENST00000395727 PDHXO00330 501 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 CAP2P40123 477 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 ZAP70P43403 619 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 PICALMQ13492 652 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 TTF1Q15361 905 aaPredicted RBP7.45□□□□□ -1.22
PTPN20-208ENST00000395727 LCE2AQ5TA79 106 aaPredicted RBP7.45□□□□□ -1.22
PTPN20-208ENST00000395727 C1orf53Q5VUE5 145 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 GPAT2Q6NUI2 795 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 RIPOR1Q6ZS17 1223 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 ADGRA1Q86SQ6 560 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 SIRT2Q8IXJ6 389 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 TEX11Q8IYF3 940 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 CLASRPQ8N2M8 674 aaKnown RBP7.45□□□□□ -1.22
PTPN20-208ENST00000395727 RETREG2Q8NC44 543 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 SH3RF3Q8TEJ3 882 aaPredicted RBP7.45□□□□□ -1.22
PTPN20-208ENST00000395727 ZNF837Q96EG3 531 aaPredicted RBP7.45□□□□□ -1.22
PTPN20-208ENST00000395727 EHD4Q9H223 541 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 PI4KBQ9UBF8 816 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 EXOC6BQ9Y2D4 811 aa7.45□□□□□ -1.22
PTPN20-208ENST00000395727 AK9Q5TCS8 1911 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 CARNS1A5YM72 827 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 BCRP11274 1271 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 CAP1Q01518 475 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 MAP3K12Q12852 859 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 UBAP2LQ14157 1087 aaKnown RBP7.44□□□□□ -1.22
PTPN20-208ENST00000395727 LBRQ14739 615 aaKnown RBP7.44□□□□□ -1.22
PTPN20-208ENST00000395727 KIF22Q14807 665 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 AACSQ86V21 672 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 FOXP4Q8IVH2 680 aaPredicted RBP7.44□□□□□ -1.22
PTPN20-208ENST00000395727 VWA5B2Q8N398 1253 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 WDR18Q9BV38 432 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 PHACTR1Q9C0D0 580 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 RUBCNLQ9H714 662 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 DNAJC18Q9H819 358 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.44□□□□□ -1.22
PTPN20-208ENST00000395727 PIH1D3Q9NQM4 214 aaKnown RBP7.44□□□□□ -1.22
PTPN20-208ENST00000395727 AATFQ9NY61 560 aaKnown RBP eCLIP7.44□□□□□ -1.22
PTPN20-208ENST00000395727 AGTPBP1Q9UPW5 1226 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 HCN4Q9Y3Q4 1203 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 GPC6Q9Y625 555 aaPredicted RBP7.44□□□□□ -1.22
PTPN20-208ENST00000395727 ZHX2Q9Y6X8 837 aa7.44□□□□□ -1.22
PTPN20-208ENST00000395727 ZSWIM8A7E2V4 1837 aa7.43□□□□□ -1.22
PTPN20-208ENST00000395727 NAV1Q8NEY1 1877 aa7.43□□□□□ -1.22
PTPN20-208ENST00000395727 IDH1O75874 414 aaKnown RBP7.43□□□□□ -1.22
PTPN20-208ENST00000395727 ASNSP08243 561 aa7.43□□□□□ -1.22
PTPN20-208ENST00000395727 CAPN2P17655 700 aa7.43□□□□□ -1.22
PTPN20-208ENST00000395727 TREML4Q6UXN2 200 aa7.43□□□□□ -1.22
PTPN20-208ENST00000395727 ALDH16A1Q8IZ83 802 aa7.43□□□□□ -1.22
PTPN20-208ENST00000395727 ZNF280CQ8ND82 737 aa7.43□□□□□ -1.22
PTPN20-208ENST00000395727 ZNF333Q96JL9 665 aa7.43□□□□□ -1.22
PTPN20-208ENST00000395727 RIOK1Q9BRS2 568 aaKnown RBP7.43□□□□□ -1.22
PTPN20-208ENST00000395727 CCDC8Q9H0W5 538 aaPredicted RBP7.43□□□□□ -1.22
PTPN20-208ENST00000395727 NUCKS1Q9H1E3 243 aaKnown RBP7.43□□□□□ -1.22
PTPN20-208ENST00000395727 AS3MTQ9HBK9 375 aa7.43□□□□□ -1.22
PTPN20-208ENST00000395727 A0A1W2PNR3 127 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 WFS1O76024 890 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 HLA-DOAP06340 250 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 ATP5JP18859 108 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 CYP7A1P22680 504 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 HOXD10P28358 340 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 SOX10P56693 466 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 PABPC4Q13310 644 aaKnown RBP eCLIP7.42□□□□□ -1.22
PTPN20-208ENST00000395727 TATDN1Q6P1N9 297 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 SV2AQ7L0J3 742 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 NBPF11Q86T75 865 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 PGBD3Q8N328 593 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 TGFBRAP1Q8WUH2 860 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 IRF7Q92985 503 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 COL26A1Q96A83 441 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 ANTXR1Q9H6X2 564 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 IL1RAPL2Q9NP60 686 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 SRRDQ9UH36 339 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 PTCH2Q9Y6C5 1203 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 MGAMO43451 1857 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 MYH1P12882 1939 aa7.42□□□□□ -1.22
PTPN20-208ENST00000395727 TCRBV5S4A2TA0A5A2 114 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms