RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 TERF1P54274 439 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 SEPT2Q15019 361 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 SLFN13Q68D06 897 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 B3GNT9Q6UX72 402 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 USP49Q70CQ1 688 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 LUZP1Q86V48 1076 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 CUL5Q93034 780 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 CSRNP1Q96S65 589 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 OR52Z1P0C646 297 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 IQUBQ8NA54 791 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 LRRC15Q8TF66 581 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 TMEM174Q8WUU8 243 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 LPAR1Q92633 364 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 VCPKMTQ9H867 229 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 SERTAD1Q9UHV2 236 aa16.11■□□□□ 0.17
CDC42SE2-202ENST00000395246 CTNND1O60716 968 aaKnown RBP16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 FOSP01100 380 aaPredicted RBP16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 FECHP22830 423 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 NAPAP54920 295 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 SPIRE1Q08AE8 756 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 LENG9Q96B70 501 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 SH2D4AQ9H788 454 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 RRAGDQ9NQL2 400 aaPredicted RBP16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 PPP1R3GB7ZBB8 358 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 POLR2DO15514 142 aaKnown RBP16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 FDX1P10109 184 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 TNFAIP1Q13829 316 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 KIAA1755Q5JYT7 1200 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 LRRC47Q8N1G4 583 aaKnown RBP16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 OGFOD1Q8N543 542 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 CNNM3Q8NE01 707 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 DACH1Q9UI36 760 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 RHOBTB3O94955 611 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 GOLGA8HP0CJ92 632 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 SYDE2Q5VT97 1194 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 HEATR3Q7Z4Q2 680 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 ETNPPLQ8TBG4 499 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 EPSTI1Q96J88 318 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 TMOD2Q9NZR1 351 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 STK17AQ9UEE5 414 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 FEM1BQ9UK73 627 aa16.1■□□□□ 0.17
CDC42SE2-202ENST00000395246 CCDC194A0A1B0GVG4 234 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 hCG_1642624A0A1W2PR95 340 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 ATP2A1O14983 1001 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 PBX1P40424 430 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 HSD17B4P51659 736 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 MRPL12P52815 198 aaKnown RBP16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 QRICH1Q2TAL8 776 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 CCDC82Q8N4S0 544 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 GOPCQ9HD26 462 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 NEMFO60524 1076 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 BMP3P12645 472 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 TBX2Q13207 712 aaPredicted RBP16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 PNOCQ13519 176 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 ZC3H3Q8IXZ2 948 aaKnown RBP16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 HAS1Q92839 578 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 TMX1Q9H3N1 280 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 ARHGEF10LQ9HCE6 1279 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 FRMD3A2A2Y4 597 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 PRR29P0C7W0 189 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 PRKCSHP14314 528 aaPredicted RBP16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 PPP1R2P41236 205 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 TNNI2P48788 182 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 NIPA1Q7RTP0 329 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 GPC2Q8N158 579 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 RABGAP1Q9Y3P9 1069 aa16.09■□□□□ 0.17
CDC42SE2-202ENST00000395246 USP17L10C9JJH3 530 aa16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 ZNF174Q15697 407 aa16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 TTBK2Q6IQ55 1244 aa16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 TBCKQ8TEA7 893 aa16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 KCNF1Q9H3M0 494 aa16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 ZNF236Q9UL36 1845 aa16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 MYL5Q02045 173 aa16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 CDC37Q16543 378 aaPredicted RBP16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 ECM1Q16610 540 aa16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 DTHD1Q6ZMT9 781 aa16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 HOOK2Q96ED9 719 aa16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 P2RX7Q99572 595 aaKnown RBP16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 SDF4Q9BRK5 362 aa16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 AMNQ9BXJ7 453 aa16.08■□□□□ 0.16
CDC42SE2-202ENST00000395246 MYPNQ86TC9 1320 aa16.07■□□□□ 0.16
CDC42SE2-202ENST00000395246 ASNSP08243 561 aa16.07■□□□□ 0.16
CDC42SE2-202ENST00000395246 SHROOM1Q2M3G4 852 aaPredicted RBP16.07■□□□□ 0.16
CDC42SE2-202ENST00000395246 CCDC34Q96HJ3 373 aa16.07■□□□□ 0.16
CDC42SE2-202ENST00000395246 ZNF536O15090 1300 aa16.07■□□□□ 0.16
CDC42SE2-202ENST00000395246 SMC2O95347 1197 aa16.07■□□□□ 0.16
CDC42SE2-202ENST00000395246 SH3D19Q5HYK7 790 aa16.07■□□□□ 0.16
CDC42SE2-202ENST00000395246 ABCB11O95342 1321 aa16.07■□□□□ 0.16
CDC42SE2-202ENST00000395246 FRMPD2Q68DX3 1309 aaPredicted RBP16.07■□□□□ 0.16
CDC42SE2-202ENST00000395246 GH2P01242 217 aa16.07■□□□□ 0.16
CDC42SE2-202ENST00000395246 CACNB3P54284 484 aa16.07■□□□□ 0.16
CDC42SE2-202ENST00000395246 ZNF658Q5TYW1 1059 aaPredicted RBP16.07■□□□□ 0.16
CDC42SE2-202ENST00000395246 KCNN1Q92952 543 aa16.07■□□□□ 0.16
CDC42SE2-202ENST00000395246 RAD17O75943 681 aa16.06■□□□□ 0.16
CDC42SE2-202ENST00000395246 INF2Q27J81 1249 aa16.06■□□□□ 0.16
CDC42SE2-202ENST00000395246 RMND1Q9NWS8 449 aa16.06■□□□□ 0.16
CDC42SE2-202ENST00000395246 WDR46O15213 610 aaKnown RBP16.06■□□□□ 0.16
CDC42SE2-202ENST00000395246 APOBEC3FQ8IUX4 373 aaKnown RBP16.06■□□□□ 0.16
CDC42SE2-202ENST00000395246 GIMAP8Q8ND71 665 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms