RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 MIR1-1HGQ9H1L0 117 aa10.75□□□□□ -0.69
PFDN6-205ENST00000395134 MAPRE3Q9UPY8 281 aa10.75□□□□□ -0.69
PFDN6-205ENST00000395134 PCDHB5Q9Y5E4 795 aa10.75□□□□□ -0.69
PFDN6-205ENST00000395134 MYH3P11055 1940 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 SCN9AQ15858 1988 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 CASP8AP2Q9UKL3 1982 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 CCDC189A1A4V9 331 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 PPIP5K2O43314 1243 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 WDHD1O75717 1129 aaPredicted RBP10.74□□□□□ -0.69
PFDN6-205ENST00000395134 RAB27AP51159 221 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 WDR43Q15061 677 aaKnown RBP eCLIP10.74□□□□□ -0.69
PFDN6-205ENST00000395134 AOC3Q16853 763 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 FOXD4L6Q3SYB3 417 aaPredicted RBP10.74□□□□□ -0.69
PFDN6-205ENST00000395134 MRM1Q6IN84 353 aaKnown RBP10.74□□□□□ -0.69
PFDN6-205ENST00000395134 FOXD4L3Q6VB84 417 aaPredicted RBP10.74□□□□□ -0.69
PFDN6-205ENST00000395134 COPS6Q7L5N1 327 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 PPP1R42Q7Z4L9 355 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 NLRP8Q86W28 1048 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 CHPFQ8IZ52 775 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 AFAP1L2Q8N4X5 818 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 ANKLE1Q8NAG6 615 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 UTP14AQ9BVJ6 771 aaKnown RBP10.74□□□□□ -0.69
PFDN6-205ENST00000395134 SEC31BQ9NQW1 1179 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 CHST12Q9NRB3 414 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 LRRC37AA6NMS7 1700 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 ABCC4O15439 1325 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 ERBB4Q15303 1308 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 PASKQ96RG2 1323 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 MYBBP1AQ9BQG0 1328 aaKnown RBP10.74□□□□□ -0.69
PFDN6-205ENST00000395134 CNTNAP1P78357 1384 aa10.74□□□□□ -0.69
PFDN6-205ENST00000395134 A0A1W2PQH9 124 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 FZD9O00144 591 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 IFRD1O00458 451 aaPredicted RBP10.73□□□□□ -0.69
PFDN6-205ENST00000395134 CILPO75339 1184 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 PAGE1O75459 146 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 HOXA10P31260 410 aaPredicted RBP10.73□□□□□ -0.69
PFDN6-205ENST00000395134 RELBQ01201 579 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 LMOD3Q0VAK6 560 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 PARP10Q53GL7 1025 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 LRRC69Q6ZNQ3 347 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 EEPD1Q7L9B9 569 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 GPC2Q8N158 579 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 NME8Q8N427 588 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 ZBTB38Q8NAP3 1195 aaPredicted RBP10.73□□□□□ -0.69
PFDN6-205ENST00000395134 SCYL1Q96KG9 808 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 HS3ST6Q96QI5 342 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 ASPSCR1Q9BZE9 553 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 ZNF395Q9H8N7 513 aaPredicted RBP10.73□□□□□ -0.69
PFDN6-205ENST00000395134 EHMT1Q9H9B1 1298 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 DUOX1Q9NRD9 1551 aa10.73□□□□□ -0.69
PFDN6-205ENST00000395134 GSG1L2A8MUP6 293 aa10.72□□□□□ -0.69
PFDN6-205ENST00000395134 PHF20L1A8MW92 1017 aa10.72□□□□□ -0.69
PFDN6-205ENST00000395134 RNF223E7ERA6 249 aa10.72□□□□□ -0.69
PFDN6-205ENST00000395134 CD2BP2O95400 341 aaKnown RBP10.72□□□□□ -0.69
PFDN6-205ENST00000395134 BPNT1O95861 308 aa10.72□□□□□ -0.69
PFDN6-205ENST00000395134 ITPKAP23677 461 aa10.72□□□□□ -0.69
PFDN6-205ENST00000395134 EPS15P42566 896 aa10.72□□□□□ -0.69
PFDN6-205ENST00000395134 TYRO3Q06418 890 aa10.72□□□□□ -0.69
PFDN6-205ENST00000395134 GRM1Q13255 1194 aa10.72□□□□□ -0.69
PFDN6-205ENST00000395134 CBX2Q14781 532 aaPredicted RBP10.72□□□□□ -0.69
PFDN6-205ENST00000395134 ZRSR2Q15696 482 aaKnown RBP10.72□□□□□ -0.69
PFDN6-205ENST00000395134 NLRP10Q86W26 655 aa10.72□□□□□ -0.69
PFDN6-205ENST00000395134 CNTROBQ8N137 903 aa10.72□□□□□ -0.69
PFDN6-205ENST00000395134 TTC8Q8TAM2 541 aa10.72□□□□□ -0.69
PFDN6-205ENST00000395134 CRAMP1Q96RY5 1269 aa10.72□□□□□ -0.69
PFDN6-205ENST00000395134 ZIC5Q96T25 663 aa10.72□□□□□ -0.69
PFDN6-205ENST00000395134 TRAF5O00463 557 aa10.71□□□□□ -0.69
PFDN6-205ENST00000395134 FOXN1O15353 648 aa10.71□□□□□ -0.69
PFDN6-205ENST00000395134 KATNA1O75449 491 aa10.71□□□□□ -0.69
PFDN6-205ENST00000395134 ITGBL1O95965 494 aaPredicted RBP10.71□□□□□ -0.69
PFDN6-205ENST00000395134 NEK2P51955 445 aa10.71□□□□□ -0.69
PFDN6-205ENST00000395134 HGSNATQ68CP4 663 aa10.71□□□□□ -0.69
PFDN6-205ENST00000395134 DIEXFQ68CQ4 756 aaKnown RBP10.71□□□□□ -0.69
PFDN6-205ENST00000395134 RUFY4Q6ZNE9 571 aa10.71□□□□□ -0.69
PFDN6-205ENST00000395134 KIF2CQ99661 725 aa10.71□□□□□ -0.69
PFDN6-205ENST00000395134 ZIM2Q9NZV7 527 aa10.71□□□□□ -0.69
PFDN6-205ENST00000395134 SFMBT1Q9UHJ3 866 aa10.71□□□□□ -0.69
PFDN6-205ENST00000395134 TRMT112Q9UI30 125 aaKnown RBP10.71□□□□□ -0.69
PFDN6-205ENST00000395134 ABT1Q9ULW3 272 aaKnown RBP10.71□□□□□ -0.69
PFDN6-205ENST00000395134 AKAP10O43572 662 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 ADCY3O60266 1144 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 ST18O60284 1047 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 CPEP16870 476 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 PHKA2P46019 1235 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 GRIA4P48058 902 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 TTC6Q86TZ1 520 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 RIN3Q8TB24 985 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 RUNDC1Q96C34 613 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 CEP63Q96MT8 703 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 ARPC5LQ9BPX5 153 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 ZKSCAN3Q9BRR0 538 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 TMX4Q9H1E5 349 aaPredicted RBP10.7□□□□□ -0.7
PFDN6-205ENST00000395134 DDX21Q9NR30 783 aaKnown RBP eCLIP10.7□□□□□ -0.7
PFDN6-205ENST00000395134 ADAMTS8Q9UP79 889 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 ATP6V0A2Q9Y487 856 aa10.7□□□□□ -0.7
PFDN6-205ENST00000395134 PDE4DIPQ5VU43 2346 aa10.69□□□□□ -0.7
PFDN6-205ENST00000395134 SH3TC1Q8TE82 1336 aa10.69□□□□□ -0.7
PFDN6-205ENST00000395134 CHL1O00533 1208 aa10.69□□□□□ -0.7
PFDN6-205ENST00000395134 KHNYNO15037 678 aaKnown RBP10.69□□□□□ -0.7
PFDN6-205ENST00000395134 RAD17O75943 681 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms