RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 IL17RBQ9NRM6 502 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 GPRC5DQ9NZD1 345 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 CHMP5Q9NZZ3 219 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 RNF181Q9P0P0 153 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 KLF18A0A0U1RQI7 1052 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 ERICH2A1L162 156 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 BACH1O14867 736 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 RCAN1P53805 252 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 WTAPQ15007 396 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 GPR162Q16538 588 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 CCDC178Q5BJE1 867 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 FAM47AQ5JRC9 791 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 C9orf131Q5VYM1 1079 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 APOA5Q6Q788 366 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 DGKHQ86XP1 1220 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 CCDC83Q8IWF9 413 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 NEDD1Q8NHV4 660 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 LLPHQ9BRT6 129 aaKnown RBP13.31□□□□□ -0.28
RTN1-203ENST00000395090 PGAP2Q9UHJ9 254 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 CNTNAP1P78357 1384 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 TNKSO95271 1327 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 CLRN2A0PK11 232 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 TSPY2A6NKD2 308 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 H7C1D1 291 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 EGFRP00533 1210 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 SHMT1P34896 483 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 NOVP48745 357 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 STK3Q13188 491 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 RCSD1Q6JBY9 416 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 ARHGEF10LQ9HCE6 1279 aa13.31□□□□□ -0.28
RTN1-203ENST00000395090 TCP10L2B9ZVM9 353 aa13.3□□□□□ -0.28
RTN1-203ENST00000395090 TATDN1Q6P1N9 297 aa13.3□□□□□ -0.28
RTN1-203ENST00000395090 HPS1Q92902 700 aa13.3□□□□□ -0.28
RTN1-203ENST00000395090 SLC12A7Q9Y666 1083 aa13.3□□□□□ -0.28
RTN1-203ENST00000395090 NID2Q14112 1375 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 CCDC69A6NI79 296 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 ZBTB43O43298 467 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 DHX16O60231 1041 aaKnown RBP13.29□□□□□ -0.28
RTN1-203ENST00000395090 NMT2O60551 498 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 CTDNEP1O95476 244 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 TSPY3P0CV98 308 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 TSPY8P0CW00 308 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 MAP3K10Q02779 954 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 PPP2R5BQ15173 497 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 NFXL1Q6ZNB6 911 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 SMARCC2Q8TAQ2 1214 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 CCDC17Q96LX7 622 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 DNAJC18Q9H819 358 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 RAB6BQ9NRW1 208 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 SMC3Q9UQE7 1217 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 PLIN4Q96Q06 1357 aa13.29□□□□□ -0.28
RTN1-203ENST00000395090 GOLGA8BA8MQT2 603 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 PRMT3O60678 531 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 DDNO94850 711 aaPredicted RBP13.28□□□□□ -0.28
RTN1-203ENST00000395090 CCT2P78371 535 aaKnown RBP13.28□□□□□ -0.28
RTN1-203ENST00000395090 KIF4BQ2VIQ3 1234 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 TBC1D10BQ4KMP7 808 aaPredicted RBP13.28□□□□□ -0.28
RTN1-203ENST00000395090 IFIT1BQ5T764 474 aaKnown RBP13.28□□□□□ -0.28
RTN1-203ENST00000395090 SYNE3Q6ZMZ3 975 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 ZSCAN29Q8IWY8 852 aaPredicted RBP13.28□□□□□ -0.28
RTN1-203ENST00000395090 NCOA5Q9HCD5 579 aaKnown RBP13.28□□□□□ -0.28
RTN1-203ENST00000395090 SERTAD1Q9UHV2 236 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 HERC5Q9UII4 1024 aaKnown RBP13.28□□□□□ -0.28
RTN1-203ENST00000395090 IGKV6D-41A0A0C4DH26 115 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 GJB2P29033 226 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 TNNI2P48788 182 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 NUCB2P80303 420 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 TROAPQ12815 778 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 TNFAIP1Q13829 316 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 PHLDB3Q6NSJ2 640 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 ZNF654Q8IZM8 581 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 CRACR2BQ8N4Y2 399 aaPredicted RBP13.28□□□□□ -0.28
RTN1-203ENST00000395090 KDF1Q8NAX2 398 aaPredicted RBP13.28□□□□□ -0.28
RTN1-203ENST00000395090 FANCBQ8NB91 859 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 NSUN7Q8NE18 718 aaKnown RBP13.28□□□□□ -0.28
RTN1-203ENST00000395090 CSRNP1Q96S65 589 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 VEZTQ9HBM0 779 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 UTRNP46939 3433 aa13.28□□□□□ -0.28
RTN1-203ENST00000395090 LGR5O75473 907 aa13.27□□□□□ -0.29
RTN1-203ENST00000395090 AKR1B1P15121 316 aa13.27□□□□□ -0.29
RTN1-203ENST00000395090 EPS15P42566 896 aa13.27□□□□□ -0.29
RTN1-203ENST00000395090 METAP2P50579 478 aaKnown RBP eCLIP13.27□□□□□ -0.29
RTN1-203ENST00000395090 HIRAP54198 1017 aaPredicted RBP13.27□□□□□ -0.29
RTN1-203ENST00000395090 RAB3GAP1Q15042 981 aa13.27□□□□□ -0.29
RTN1-203ENST00000395090 NTRK3Q16288 839 aa13.27□□□□□ -0.29
RTN1-203ENST00000395090 CATIPQ7Z7H3 387 aa13.27□□□□□ -0.29
RTN1-203ENST00000395090 TEPSINQ96N21 525 aa13.27□□□□□ -0.29
RTN1-203ENST00000395090 MAP3K14Q99558 947 aa13.27□□□□□ -0.29
RTN1-203ENST00000395090 MTMR4Q9NYA4 1195 aa13.27□□□□□ -0.29
RTN1-203ENST00000395090 NAP1L2Q9ULW6 460 aaPredicted RBP13.27□□□□□ -0.29
RTN1-203ENST00000395090 SIPA1L1O43166 1804 aa13.27□□□□□ -0.29
RTN1-203ENST00000395090 DDAH1O94760 285 aa13.26□□□□□ -0.29
RTN1-203ENST00000395090 CALM1P0DP23 149 aa13.26□□□□□ -0.29
RTN1-203ENST00000395090 CALM2P0DP24 149 aa13.26□□□□□ -0.29
RTN1-203ENST00000395090 CALM3P0DP25 149 aa13.26□□□□□ -0.29
RTN1-203ENST00000395090 SLURP2P0DP57 97 aa13.26□□□□□ -0.29
RTN1-203ENST00000395090 CDC27P30260 824 aa13.26□□□□□ -0.29
RTN1-203ENST00000395090 HMGN5P82970 282 aaKnown RBP13.26□□□□□ -0.29
RTN1-203ENST00000395090 RASA3Q14644 834 aa13.26□□□□□ -0.29
RTN1-203ENST00000395090 CEP95Q96GE4 821 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms