RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 ADAMTS7Q9UKP4 1686 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 POTEB2H3BUK9 544 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 CXCR5P32302 372 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 STK4Q13043 487 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 C12orf60Q5U649 245 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 SH3RF1Q7Z6J0 888 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 ELOA2Q8IYF1 753 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-203ENST00000394419 GJA10Q969M2 543 aa11.78□□□□□ -0.52
ACTN1-203ENST00000394419 SPATA31A1Q5TZJ5 1347 aa11.77□□□□□ -0.52
ACTN1-203ENST00000394419 GOLGB1Q14789 3259 aaKnown RBP11.77□□□□□ -0.52
ACTN1-203ENST00000394419 AKAP11Q9UKA4 1901 aa11.77□□□□□ -0.52
ACTN1-203ENST00000394419 USO1O60763 962 aaKnown RBP11.77□□□□□ -0.52
ACTN1-203ENST00000394419 DNM2P50570 870 aa11.77□□□□□ -0.52
ACTN1-203ENST00000394419 BRD3Q15059 726 aa11.77□□□□□ -0.52
ACTN1-203ENST00000394419 RCSD1Q6JBY9 416 aa11.77□□□□□ -0.52
ACTN1-203ENST00000394419 DGKHQ86XP1 1220 aa11.77□□□□□ -0.52
ACTN1-203ENST00000394419 NELFCDQ8IXH7 590 aa11.77□□□□□ -0.52
ACTN1-203ENST00000394419 GSPT2Q8IYD1 628 aaKnown RBP11.77□□□□□ -0.52
ACTN1-203ENST00000394419 SPATA20Q8TB22 786 aa11.77□□□□□ -0.52
ACTN1-203ENST00000394419 LIMA1Q9UHB6 759 aaKnown RBP11.77□□□□□ -0.52
ACTN1-203ENST00000394419 SPEF2Q9C093 1822 aa11.77□□□□□ -0.52
ACTN1-203ENST00000394419 BICDL2A1A5D9 508 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 N4BP1O75113 896 aaKnown RBP11.77□□□□□ -0.53
ACTN1-203ENST00000394419 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.53
ACTN1-203ENST00000394419 NPY5RQ15761 445 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 CALCRLQ16602 461 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 PTPROQ16827 1216 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 DNAJC21Q5F1R6 531 aaKnown RBP11.77□□□□□ -0.53
ACTN1-203ENST00000394419 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 ARL6IP4Q66PJ3 421 aaKnown RBP11.77□□□□□ -0.53
ACTN1-203ENST00000394419 RRAGAQ7L523 313 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 NEK8Q86SG6 692 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 FAM114A1Q8IWE2 563 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 SNX29Q8TEQ0 813 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 SMCR8Q8TEV9 937 aaPredicted RBP11.77□□□□□ -0.53
ACTN1-203ENST00000394419 KANSL2Q9H9L4 492 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 FAN1Q9Y2M0 1017 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 DUSP10Q9Y6W6 482 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 TJP1Q07157 1748 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 SEMA3EO15041 775 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 SLC16A2P36021 539 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 ANKRD40Q6AI12 368 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 ADSSL1Q8N142 457 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 TXLNBQ8N3L3 684 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 ADAM21Q9UKJ8 722 aa11.77□□□□□ -0.53
ACTN1-203ENST00000394419 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.77□□□□□ -0.53
ACTN1-203ENST00000394419 POTEMA6NI47 508 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 TRAF5O00463 557 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 ZRANB2O95218 330 aaKnown RBP eCLIP11.76□□□□□ -0.53
ACTN1-203ENST00000394419 ATP1A1P05023 1023 aaKnown RBP11.76□□□□□ -0.53
ACTN1-203ENST00000394419 CDK8P49336 464 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 GTF2IP78347 998 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 E2F4Q16254 413 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 KRT79Q5XKE5 535 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 NOC3LQ8WTT2 800 aaKnown RBP11.76□□□□□ -0.53
ACTN1-203ENST00000394419 ARHGEF1Q92888 912 aaKnown RBP11.76□□□□□ -0.53
ACTN1-203ENST00000394419 P2RX5Q93086 422 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 BMP2KQ9NSY1 1161 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-203ENST00000394419 ZNF142P52746 1687 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-203ENST00000394419 USP17L5A8MUK1 530 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 LGALS16A8MUM7 142 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 ZNF185O15231 689 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 CYTH3O43739 400 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 TAF3Q5VWG9 929 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 APTXQ7Z2E3 356 aaKnown RBP11.76□□□□□ -0.53
ACTN1-203ENST00000394419 KRT25Q7Z3Z0 450 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 POTEDQ86YR6 584 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 CEP95Q96GE4 821 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 RUFY1Q96T51 708 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 LAMB4A4D0S4 1761 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 PARP4Q9UKK3 1724 aaKnown RBP11.76□□□□□ -0.53
ACTN1-203ENST00000394419 ZSCAN26Q16670 478 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 UBE2SQ16763 222 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 WHAMMP3Q1A5X7 153 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 FUT8Q9BYC5 575 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 RAB34Q9BZG1 259 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 HAUS4Q9H6D7 363 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 NHEJ1Q9H9Q4 299 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-203ENST00000394419 BARHL2Q9NY43 387 aa11.76□□□□□ -0.53
ACTN1-203ENST00000394419 PLEKHG2Q9H7P9 1386 aa11.75□□□□□ -0.53
ACTN1-203ENST00000394419 BAZ2AQ9UIF9 1905 aaKnown RBP11.75□□□□□ -0.53
ACTN1-203ENST00000394419 PKD1L3Q7Z443 1732 aa11.75□□□□□ -0.53
ACTN1-203ENST00000394419 SCNN1DP51172 638 aa11.75□□□□□ -0.53
ACTN1-203ENST00000394419 CNNM4Q6P4Q7 775 aa11.75□□□□□ -0.53
ACTN1-203ENST00000394419 FAM196AQ6ZSG2 479 aa11.75□□□□□ -0.53
ACTN1-203ENST00000394419 RSRC2Q7L4I2 434 aaKnown RBP11.75□□□□□ -0.53
ACTN1-203ENST00000394419 TNFRSF25Q93038 417 aa11.75□□□□□ -0.53
ACTN1-203ENST00000394419 CWC15Q9P013 229 aaKnown RBP11.75□□□□□ -0.53
ACTN1-203ENST00000394419 NARFQ9UHQ1 456 aa11.75□□□□□ -0.53
ACTN1-203ENST00000394419 MAD2L2Q9UI95 211 aa11.75□□□□□ -0.53
ACTN1-203ENST00000394419 BUB1O43683 1085 aa11.75□□□□□ -0.53
ACTN1-203ENST00000394419 EEF1GP26641 437 aaKnown RBP11.75□□□□□ -0.53
ACTN1-203ENST00000394419 CASP8Q14790 479 aa11.75□□□□□ -0.53
ACTN1-203ENST00000394419 CT47A1Q5JQC4 288 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-203ENST00000394419 TRMT1LQ7Z2T5 733 aaKnown RBP11.75□□□□□ -0.53
ACTN1-203ENST00000394419 C10orf67Q8IYJ2 551 aa11.75□□□□□ -0.53
ACTN1-203ENST00000394419 SECISBP2LQ93073 1101 aaKnown RBP11.75□□□□□ -0.53
ACTN1-203ENST00000394419 IFIH1Q9BYX4 1025 aaKnown RBP11.75□□□□□ -0.53
ACTN1-203ENST00000394419 TMX4Q9H1E5 349 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-203ENST00000394419 POLD4Q9HCU8 107 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms