RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 CC2D1AQ6P1N0 951 aaPredicted RBP9.85□□□□□ -0.83
CHD2-201ENST00000394196 ZNF354CQ86Y25 554 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 LRRC8AQ8IWT6 810 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 HLA-DOAP06340 250 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 KRT9P35527 623 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 MAGEA1P43355 309 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 THOC7Q6I9Y2 204 aaKnown RBP9.85□□□□□ -0.83
CHD2-201ENST00000394196 Q6ZUG5 572 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 LRRC49Q8IUZ0 686 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 BRF1Q92994 677 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 CLMNQ96JQ2 1002 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 CCDC28BQ9BUN5 200 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 CBX8Q9HC52 389 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 RBM8AQ9Y5S9 174 aaKnown RBP9.85□□□□□ -0.83
CHD2-201ENST00000394196 HECW1Q76N89 1606 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 PFDN6O15212 129 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 HNRNPRO43390 633 aaKnown RBP9.85□□□□□ -0.83
CHD2-201ENST00000394196 SMARCA5O60264 1052 aaPredicted RBP9.85□□□□□ -0.83
CHD2-201ENST00000394196 KPNB1Q14974 876 aaKnown RBP9.85□□□□□ -0.83
CHD2-201ENST00000394196 E2F5Q15329 346 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 SCYL3Q8IZE3 742 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 CHAMP1Q96JM3 812 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 PHACTR3Q96KR7 559 aa9.85□□□□□ -0.83
CHD2-201ENST00000394196 MMEL1Q495T6 779 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 TMOD4Q9NZQ9 345 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 CCPG1Q9ULG6 757 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 MLH1P40692 756 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 TNNI2P48788 182 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 AP2B1P63010 937 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 FAM81BQ96LP2 452 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.84□□□□□ -0.83
CHD2-201ENST00000394196 MAPK13O15264 365 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 OGFOD1Q8N543 542 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 UBE4BO95155 1302 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 RBM6P78332 1123 aaKnown RBP9.84□□□□□ -0.83
CHD2-201ENST00000394196 ICA1Q05084 483 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 UPF3AQ9H1J1 476 aaKnown RBP9.84□□□□□ -0.83
CHD2-201ENST00000394196 COG4Q9H9E3 785 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 NSD3Q9BZ95 1437 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 MARCKSP29966 332 aaPredicted RBP9.84□□□□□ -0.83
CHD2-201ENST00000394196 COPB2P35606 906 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 PRR23BQ6ZRT6 265 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 SRRM1Q8IYB3 904 aaKnown RBP9.84□□□□□ -0.83
CHD2-201ENST00000394196 PDCD10Q9BUL8 212 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 Q4G0T1 1027 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 NUGGCQ68CJ6 796 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 DHX32Q7L7V1 743 aaKnown RBP9.84□□□□□ -0.83
CHD2-201ENST00000394196 THAP11Q96EK4 314 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 LSM14BQ9BX40 385 aaKnown RBP9.84□□□□□ -0.83
CHD2-201ENST00000394196 TTI1O43156 1089 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 OR8K1Q8NGG5 319 aa9.84□□□□□ -0.83
CHD2-201ENST00000394196 SUCLA2Q9P2R7 463 aaPredicted RBP9.84□□□□□ -0.83
CHD2-201ENST00000394196 PPIP5K2O43314 1243 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 TBL3Q12788 808 aaKnown RBP9.83□□□□□ -0.84
CHD2-201ENST00000394196 RAPGEF1Q13905 1077 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 ITFG2Q969R8 447 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 SOS1Q07889 1333 aaPredicted RBP9.83□□□□□ -0.84
CHD2-201ENST00000394196 PEX14O75381 377 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 VIL1P09327 827 aaKnown RBP9.83□□□□□ -0.84
CHD2-201ENST00000394196 EFR3AQ14156 821 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 BBS9Q3SYG4 887 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 TRIM69Q86WT6 500 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 PASD1Q8IV76 773 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 TMEM87AQ8NBN3 555 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 SPATA17Q96L03 361 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 FAM96AQ9H5X1 160 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 SNX5Q9Y5X3 404 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 PDE1AP54750 535 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 STRN3Q13033 797 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 IKBIPQ70UQ0 350 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 CCDC117Q8IWD4 279 aaPredicted RBP9.83□□□□□ -0.84
CHD2-201ENST00000394196 CCSER2Q9H7U1 834 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 SMTNP53814 917 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 ICA1LQ8NDH6 482 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 TSPAN18Q96SJ8 248 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 BHMT2Q9H2M3 363 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 TRIM39Q9HCM9 518 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 A8MXQ7 604 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 RNF169Q8NCN4 708 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 NR1H4Q96RI1 486 aaPredicted RBP9.83□□□□□ -0.84
CHD2-201ENST00000394196 HAUS7Q99871 368 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 KLHL20Q9Y2M5 609 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 POTECB2RU33 542 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 PPIDQ08752 370 aaKnown RBP9.83□□□□□ -0.84
CHD2-201ENST00000394196 ATP13A5Q4VNC0 1218 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 PPWD1Q96BP3 646 aaKnown RBP9.83□□□□□ -0.84
CHD2-201ENST00000394196 FAM8A1Q9UBU6 413 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 BLOC1S6Q9UL45 172 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 AFG3L2Q9Y4W6 797 aa9.83□□□□□ -0.84
CHD2-201ENST00000394196 PDE11AQ9HCR9 933 aa9.82□□□□□ -0.84
CHD2-201ENST00000394196 CDC23Q9UJX2 597 aa9.82□□□□□ -0.84
CHD2-201ENST00000394196 MAP3K1Q13233 1512 aa9.82□□□□□ -0.84
CHD2-201ENST00000394196 PGM3O95394 542 aa9.82□□□□□ -0.84
CHD2-201ENST00000394196 IL1RL1Q01638 556 aa9.82□□□□□ -0.84
CHD2-201ENST00000394196 RARS2Q5T160 578 aaKnown RBP9.82□□□□□ -0.84
CHD2-201ENST00000394196 RHOBTB2Q9BYZ6 727 aa9.82□□□□□ -0.84
CHD2-201ENST00000394196 AP4S1Q9Y587 144 aa9.82□□□□□ -0.84
CHD2-201ENST00000394196 KDM2BQ8NHM5 1336 aa9.82□□□□□ -0.84
CHD2-201ENST00000394196 PASKQ96RG2 1323 aa9.82□□□□□ -0.84
CHD2-201ENST00000394196 MROH2BQ7Z745 1585 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms