RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 ADRA2BP18089 450 aa24.2■■□□□ 1.47
CLDND1-202ENST00000394180 RFX5P48382 616 aaPredicted RBP24.2■■□□□ 1.47
CLDND1-202ENST00000394180 HERVK_113P62684 666 aa24.2■■□□□ 1.47
CLDND1-202ENST00000394180 KRT31Q15323 416 aa24.2■■□□□ 1.47
CLDND1-202ENST00000394180 PARP10Q53GL7 1025 aa24.2■■□□□ 1.47
CLDND1-202ENST00000394180 CCDC26Q8TAB7 109 aa24.2■■□□□ 1.47
CLDND1-202ENST00000394180 ATP6V1G3Q96LB4 118 aa24.2■■□□□ 1.47
CLDND1-202ENST00000394180 RNF113AO15541 343 aaKnown RBP24.2■■□□□ 1.46
CLDND1-202ENST00000394180 COPB1P53618 953 aaKnown RBP24.2■■□□□ 1.46
CLDND1-202ENST00000394180 TRAF1Q13077 416 aa24.2■■□□□ 1.46
CLDND1-202ENST00000394180 NAA25Q14CX7 972 aa24.2■■□□□ 1.46
CLDND1-202ENST00000394180 CFAP58Q5T655 872 aa24.2■■□□□ 1.46
CLDND1-202ENST00000394180 CREG2Q8IUH2 290 aa24.2■■□□□ 1.46
CLDND1-202ENST00000394180 TSEN2Q8NCE0 465 aaKnown RBP24.2■■□□□ 1.46
CLDND1-202ENST00000394180 RRP36Q96EU6 259 aaKnown RBP24.2■■□□□ 1.46
CLDND1-202ENST00000394180 CYFIP2Q96F07 1278 aa24.2■■□□□ 1.46
CLDND1-202ENST00000394180 KDM4CQ9H3R0 1056 aa24.2■■□□□ 1.46
CLDND1-202ENST00000394180 RABEP2Q9H5N1 569 aa24.2■■□□□ 1.46
CLDND1-202ENST00000394180 MAST3O60307 1309 aa24.2■■□□□ 1.46
CLDND1-202ENST00000394180 PPP1R3GB7ZBB8 358 aa24.19■■□□□ 1.46
CLDND1-202ENST00000394180 TCP1P17987 556 aaKnown RBP24.19■■□□□ 1.46
CLDND1-202ENST00000394180 DDX46Q7L014 1031 aaKnown RBP24.19■■□□□ 1.46
CLDND1-202ENST00000394180 EIF1ADQ8N9N8 165 aaKnown RBP24.19■■□□□ 1.46
CLDND1-202ENST00000394180 TRIM58Q8NG06 486 aa24.19■■□□□ 1.46
CLDND1-202ENST00000394180 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.19■■□□□ 1.46
CLDND1-202ENST00000394180 WASF1Q92558 559 aa24.19■■□□□ 1.46
CLDND1-202ENST00000394180 SAAL1Q96ER3 474 aa24.19■■□□□ 1.46
CLDND1-202ENST00000394180 CAPZA3Q96KX2 299 aa24.19■■□□□ 1.46
CLDND1-202ENST00000394180 SRGAP2O75044 1071 aa24.19■■□□□ 1.46
CLDND1-202ENST00000394180 PRPHP41219 470 aa24.19■■□□□ 1.46
CLDND1-202ENST00000394180 HDLBPQ00341 1268 aaKnown RBP24.19■■□□□ 1.46
CLDND1-202ENST00000394180 TTC19Q6DKK2 380 aaPredicted RBP24.19■■□□□ 1.46
CLDND1-202ENST00000394180 CHST3Q7LGC8 479 aa24.19■■□□□ 1.46
CLDND1-202ENST00000394180 NOSTRINQ8IVI9 506 aa24.19■■□□□ 1.46
CLDND1-202ENST00000394180 AIDAQ96BJ3 306 aa24.19■■□□□ 1.46
CLDND1-202ENST00000394180 RNF14Q9UBS8 474 aa24.19■■□□□ 1.46
CLDND1-202ENST00000394180 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.19■■□□□ 1.46
CLDND1-202ENST00000394180 PDHBP11177 359 aa24.18■■□□□ 1.46
CLDND1-202ENST00000394180 GCKP35557 465 aa24.18■■□□□ 1.46
CLDND1-202ENST00000394180 IFT20Q8IY31 132 aa24.18■■□□□ 1.46
CLDND1-202ENST00000394180 RASSF8Q8NHQ8 419 aa24.18■■□□□ 1.46
CLDND1-202ENST00000394180 SETDB2Q96T68 719 aa24.18■■□□□ 1.46
CLDND1-202ENST00000394180 GJB4Q9NTQ9 266 aa24.18■■□□□ 1.46
CLDND1-202ENST00000394180 RWDD2AQ9UIY3 292 aa24.18■■□□□ 1.46
CLDND1-202ENST00000394180 CAPN11Q9UMQ6 739 aa24.18■■□□□ 1.46
CLDND1-202ENST00000394180 IPO7O95373 1038 aaKnown RBP24.18■■□□□ 1.46
CLDND1-202ENST00000394180 CDK17Q00537 523 aa24.18■■□□□ 1.46
CLDND1-202ENST00000394180 PTPN12Q05209 780 aaKnown RBP24.18■■□□□ 1.46
CLDND1-202ENST00000394180 C2orf54Q08AI8 447 aa24.18■■□□□ 1.46
CLDND1-202ENST00000394180 TFCP2Q12800 502 aa24.18■■□□□ 1.46
CLDND1-202ENST00000394180 TTF1Q15361 905 aaPredicted RBP24.18■■□□□ 1.46
CLDND1-202ENST00000394180 LRIG3Q6UXM1 1119 aa24.18■■□□□ 1.46
CLDND1-202ENST00000394180 SPATA4Q8NEY3 305 aa24.18■■□□□ 1.46
CLDND1-202ENST00000394180 MOV10L1Q9BXT6 1211 aaKnown RBP24.18■■□□□ 1.46
CLDND1-202ENST00000394180 GYS1P13807 737 aa24.17■■□□□ 1.46
CLDND1-202ENST00000394180 IDEP14735 1019 aa24.17■■□□□ 1.46
CLDND1-202ENST00000394180 ITGB3BPQ13352 177 aaPredicted RBP24.17■■□□□ 1.46
CLDND1-202ENST00000394180 DBNDD2Q9BQY9 259 aa24.17■■□□□ 1.46
CLDND1-202ENST00000394180 LRRC1Q9BTT6 524 aa24.17■■□□□ 1.46
CLDND1-202ENST00000394180 PLA2G12BQ9BX93 195 aa24.17■■□□□ 1.46
CLDND1-202ENST00000394180 DMGDHQ9UI17 866 aaKnown RBP24.17■■□□□ 1.46
CLDND1-202ENST00000394180 LUC7L2Q9Y383 392 aaKnown RBP24.17■■□□□ 1.46
CLDND1-202ENST00000394180 GMNCA6NCL1 334 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 PAEPP09466 180 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 ATP2B2Q01814 1243 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 CCDC24Q8N4L8 307 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 ZNF594Q96JF6 807 aaPredicted RBP24.16■■□□□ 1.46
CLDND1-202ENST00000394180 CHP1Q99653 195 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 TRIM10Q9UDY6 481 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 ECM29Q5VYK3 1845 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 IRF6O14896 467 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 GSTA1P08263 222 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 CD44P16070 742 aaKnown RBP24.16■■□□□ 1.46
CLDND1-202ENST00000394180 GUCY1A3Q02108 690 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 PAK2Q13177 524 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 RALYLQ86SE5 291 aaKnown RBP24.16■■□□□ 1.46
CLDND1-202ENST00000394180 COL23A1Q86Y22 540 aaPredicted RBP24.16■■□□□ 1.46
CLDND1-202ENST00000394180 RETREG2Q8NC44 543 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 OSBPL7Q9BZF2 842 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 FOXP1Q9H334 677 aaPredicted RBP24.16■■□□□ 1.46
CLDND1-202ENST00000394180 GDF3Q9NR23 364 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 AATFQ9NY61 560 aaKnown RBP eCLIP24.16■■□□□ 1.46
CLDND1-202ENST00000394180 RGPD3A6NKT7 1758 aaPredicted RBP24.16■■□□□ 1.46
CLDND1-202ENST00000394180 RGPD4Q7Z3J3 1758 aa24.16■■□□□ 1.46
CLDND1-202ENST00000394180 SNUPNO95149 360 aaKnown RBP24.15■■□□□ 1.46
CLDND1-202ENST00000394180 ATP1A2P50993 1020 aa24.15■■□□□ 1.46
CLDND1-202ENST00000394180 ANTXR2P58335 489 aa24.15■■□□□ 1.46
CLDND1-202ENST00000394180 NFIXQ14938 502 aa24.15■■□□□ 1.46
CLDND1-202ENST00000394180 ERFEQ4G0M1 354 aa24.15■■□□□ 1.46
CLDND1-202ENST00000394180 TTLL11Q8NHH1 800 aa24.15■■□□□ 1.46
CLDND1-202ENST00000394180 WHAMMQ8TF30 809 aa24.15■■□□□ 1.46
CLDND1-202ENST00000394180 CUL5Q93034 780 aa24.15■■□□□ 1.46
CLDND1-202ENST00000394180 ZNHIT6Q9NWK9 470 aaKnown RBP24.15■■□□□ 1.46
CLDND1-202ENST00000394180 ZNF233A6NK53 670 aa24.15■■□□□ 1.46
CLDND1-202ENST00000394180 ZFYP08048 801 aaPredicted RBP24.15■■□□□ 1.46
CLDND1-202ENST00000394180 BAG6P46379 1132 aa24.15■■□□□ 1.46
CLDND1-202ENST00000394180 SCTRP47872 440 aa24.15■■□□□ 1.46
CLDND1-202ENST00000394180 CTSWP56202 376 aa24.15■■□□□ 1.46
CLDND1-202ENST00000394180 TCP11X2Q5H9J9 407 aa24.15■■□□□ 1.46
CLDND1-202ENST00000394180 SCLT1Q96NL6 688 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms