RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 DOCK2Q92608 1830 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 GOLGA6CA6NDK9 693 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 GOLGA6DP0CG33 693 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 GPSM2P81274 684 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 ACTN3Q08043 901 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-204ENST00000394164 DPYDQ12882 1025 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 CUL4BQ13620 913 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 NAPGQ99747 312 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-204ENST00000394164 RBM28Q9NW13 759 aaKnown RBP11.14□□□□□ -0.63
PSEN1-204ENST00000394164 GOLGA6AQ9NYA3 693 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 GUCA1BQ9UMX6 200 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 SSBP05455 408 aaKnown RBP eCLIP11.13□□□□□ -0.63
PSEN1-204ENST00000394164 MYBL2P10244 700 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 RRAGBQ5VZM2 374 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 GPIHBP1Q8IV16 184 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 CCDC148Q8NFR7 591 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 SLF1Q9BQI6 1058 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 MXD3Q9BW11 206 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 ATP8A2Q9NTI2 1148 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 FAM237AA0A1B0GTK4 181 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 ZEB2O60315 1214 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 CASP14P31944 242 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 USP17L2Q6R6M4 530 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 N4BP2L2Q92802 583 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-204ENST00000394164 UBA5Q9GZZ9 404 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 VPS16Q9H269 839 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 ARPP21Q9UBL0 812 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-204ENST00000394164 CNTNAP4Q9C0A0 1308 aa11.13□□□□□ -0.63
PSEN1-204ENST00000394164 SHTN1A0MZ66 631 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 NEBLO76041 1014 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 CALM1P0DP23 149 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 CALM2P0DP24 149 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 CALM3P0DP25 149 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 BTDP43251 543 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 ATP1A2P50993 1020 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 RNF187Q5TA31 235 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-204ENST00000394164 FAM107BQ9H098 131 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 MYO6Q9UM54 1294 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 GDAQ9Y2T3 454 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 DDAH1O94760 285 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 ERCC3P19447 782 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 RDXP35241 583 aaKnown RBP11.12□□□□□ -0.63
PSEN1-204ENST00000394164 USP8P40818 1118 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 VPS72Q15906 364 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 MAP9Q49MG5 647 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 C12orf60Q5U649 245 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 MLKLQ8NB16 471 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 CAPS2Q9BXY5 557 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 ZNF219Q9P2Y4 722 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-204ENST00000394164 SYNRGQ9UMZ2 1314 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 ARAP2Q8WZ64 1704 aa11.12□□□□□ -0.63
PSEN1-204ENST00000394164 CCDC194A0A1B0GVG4 234 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 PAX7P23759 505 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 SARSP49591 514 aaKnown RBP11.11□□□□□ -0.63
PSEN1-204ENST00000394164 PDCLQ13371 301 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 PFKFB3Q16875 520 aaPredicted RBP11.11□□□□□ -0.63
PSEN1-204ENST00000394164 SLC35G1Q2M3R5 365 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 TEX11Q8IYF3 940 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 MMS19Q96T76 1030 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 FRMPD2Q68DX3 1309 aaPredicted RBP11.11□□□□□ -0.63
PSEN1-204ENST00000394164 BCORQ6W2J9 1755 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 CYTH3O43739 400 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 MFSD14BQ5SR56 506 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 PRR5LQ6MZQ0 368 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 CEP57Q86XR8 500 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 BLIDQ8IZY5 108 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 MTRQ99707 1265 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 TMEM47Q9BQJ4 181 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 TMEM60Q9H2L4 133 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 DUOX1Q9NRD9 1551 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 XDHP47989 1333 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 TRIM49BA6NDI0 452 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 ORC4O43929 436 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 KIF5BP33176 963 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 GRAPQ13588 217 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 LETM2Q2VYF4 491 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 KCTD16Q68DU8 428 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 OTUD6BQ8N6M0 293 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 ZNF579Q8NAF0 562 aaKnown RBP11.11□□□□□ -0.63
PSEN1-204ENST00000394164 GRAPLQ8TC17 118 aaPredicted RBP11.11□□□□□ -0.63
PSEN1-204ENST00000394164 CAGE1Q8TC20 777 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 TNFRSF25Q93038 417 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 RRP36Q96EU6 259 aaKnown RBP11.11□□□□□ -0.63
PSEN1-204ENST00000394164 TAB2Q9NYJ8 693 aa11.11□□□□□ -0.63
PSEN1-204ENST00000394164 NDUFAB1O14561 156 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 KIAA0754O94854 1291 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 BAG3O95817 575 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 FXR1P51114 621 aaKnown RBP eCLIP11.1□□□□□ -0.63
PSEN1-204ENST00000394164 LRCH2Q5VUJ6 765 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 SPTY2D1Q68D10 685 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-204ENST00000394164 AMOTL1Q8IY63 956 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 CABS1Q96KC9 395 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 SELENOOQ9BVL4 669 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 DACH1Q9UI36 760 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 GOLGA6BA6NDN3 693 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 KLRF2D3W0D1 207 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 AGPSO00116 658 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 SEMA3EO15041 775 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 STAT6P42226 847 aa11.1□□□□□ -0.63
PSEN1-204ENST00000394164 MATR3P43243 847 aaKnown RBP eCLIP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms