RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 CHST13Q8NET6 341 aa29.36■■■□□ 2.29
HOMER3-202ENST00000392351 ACAD9Q9H845 621 aa29.36■■■□□ 2.29
HOMER3-202ENST00000392351 FBXO40Q9UH90 709 aa29.36■■■□□ 2.29
HOMER3-202ENST00000392351 PCDHA1Q9Y5I3 950 aa29.36■■■□□ 2.29
HOMER3-202ENST00000392351 ST3GAL1Q11201 340 aa29.35■■■□□ 2.29
HOMER3-202ENST00000392351 MUM1L1Q5H9M0 696 aa29.35■■■□□ 2.29
HOMER3-202ENST00000392351 CCDC83Q8IWF9 413 aa29.35■■■□□ 2.29
HOMER3-202ENST00000392351 COA7Q96BR5 231 aa29.35■■■□□ 2.29
HOMER3-202ENST00000392351 RNF26Q9BY78 433 aaPredicted RBP29.35■■■□□ 2.29
HOMER3-202ENST00000392351 ABCB11O95342 1321 aa29.35■■■□□ 2.29
HOMER3-202ENST00000392351 PRPF3O43395 683 aaKnown RBP29.35■■■□□ 2.29
HOMER3-202ENST00000392351 AKAP17AQ02040 695 aaKnown RBP29.35■■■□□ 2.29
HOMER3-202ENST00000392351 ARHGEF6Q15052 776 aa29.35■■■□□ 2.29
HOMER3-202ENST00000392351 TRIM22Q8IYM9 498 aa29.35■■■□□ 2.29
HOMER3-202ENST00000392351 TMX3Q96JJ7 454 aa29.35■■■□□ 2.29
HOMER3-202ENST00000392351 SSRP1Q08945 709 aaKnown RBP29.34■■■□□ 2.29
HOMER3-202ENST00000392351 TRAF1Q13077 416 aa29.34■■■□□ 2.29
HOMER3-202ENST00000392351 RBM27Q9P2N5 1060 aaKnown RBP29.34■■■□□ 2.29
HOMER3-202ENST00000392351 ZNF236Q9UL36 1845 aa29.34■■■□□ 2.29
HOMER3-202ENST00000392351 DTNBO60941 627 aa29.33■■■□□ 2.29
HOMER3-202ENST00000392351 CTDNEP1O95476 244 aa29.33■■■□□ 2.29
HOMER3-202ENST00000392351 FCER1AP12319 257 aa29.33■■■□□ 2.29
HOMER3-202ENST00000392351 HEATR3Q7Z4Q2 680 aa29.33■■■□□ 2.29
HOMER3-202ENST00000392351 GPKOWQ92917 476 aaPredicted RBP eCLIP29.33■■■□□ 2.29
HOMER3-202ENST00000392351 NFIBO00712 420 aa29.32■■■□□ 2.28
HOMER3-202ENST00000392351 STRNO43815 780 aa29.32■■■□□ 2.28
HOMER3-202ENST00000392351 PTPREP23469 700 aa29.32■■■□□ 2.28
HOMER3-202ENST00000392351 MMP19Q99542 508 aa29.32■■■□□ 2.28
HOMER3-202ENST00000392351 MRPL11Q9Y3B7 192 aaKnown RBP29.32■■■□□ 2.28
HOMER3-202ENST00000392351 GNRH1P01148 92 aa29.31■■■□□ 2.28
HOMER3-202ENST00000392351 KCTD2Q14681 263 aa29.31■■■□□ 2.28
HOMER3-202ENST00000392351 PFKFB3Q16875 520 aaPredicted RBP29.31■■■□□ 2.28
HOMER3-202ENST00000392351 CLEC4DQ8WXI8 215 aa29.31■■■□□ 2.28
HOMER3-202ENST00000392351 PLXNA1Q9UIW2 1896 aa29.31■■■□□ 2.28
HOMER3-202ENST00000392351 TRIM17Q9Y577 477 aa29.31■■■□□ 2.28
HOMER3-202ENST00000392351 SCG2P13521 617 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 GRB14Q14449 540 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 PKN1Q16512 942 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 WWC2Q6AWC2 1192 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 OTOP1Q7RTM1 612 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 ANKRD35Q8N283 1001 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 NSUN7Q8NE18 718 aaKnown RBP29.3■■■□□ 2.28
HOMER3-202ENST00000392351 SLC15A5A6NIM6 579 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 HOXD10P28358 340 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 ADORA2AP29274 412 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 PRKCZQ05513 592 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 NSMFQ6X4W1 530 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.3■■■□□ 2.28
HOMER3-202ENST00000392351 ABRAQ8N0Z2 381 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 SOCS4Q8WXH5 440 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 NUDT12Q9BQG2 462 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 A1CFQ9NQ94 594 aaKnown RBP29.3■■■□□ 2.28
HOMER3-202ENST00000392351 PRDM10Q9NQV6 1147 aa29.3■■■□□ 2.28
HOMER3-202ENST00000392351 PTPDC1A2A3K4 754 aa29.29■■■□□ 2.28
HOMER3-202ENST00000392351 MORN1Q5T089 497 aa29.29■■■□□ 2.28
HOMER3-202ENST00000392351 SRRDQ9UH36 339 aa29.29■■■□□ 2.28
HOMER3-202ENST00000392351 GABRQQ9UN88 632 aa29.29■■■□□ 2.28
HOMER3-202ENST00000392351 STK36Q9NRP7 1315 aa29.28■■■□□ 2.28
HOMER3-202ENST00000392351 hCG_1984214I3L0E3 225 aa29.28■■■□□ 2.28
HOMER3-202ENST00000392351 JAK2O60674 1132 aa29.28■■■□□ 2.28
HOMER3-202ENST00000392351 DEXIO95424 95 aa29.28■■■□□ 2.28
HOMER3-202ENST00000392351 ZNF713Q8N859 430 aaPredicted RBP29.28■■■□□ 2.28
HOMER3-202ENST00000392351 SNX21Q969T3 373 aa29.28■■■□□ 2.28
HOMER3-202ENST00000392351 DDX11Q96FC9 970 aa29.28■■■□□ 2.28
HOMER3-202ENST00000392351 GJD2Q9UKL4 321 aa29.28■■■□□ 2.28
HOMER3-202ENST00000392351 LCTP09848 1927 aa29.28■■■□□ 2.28
HOMER3-202ENST00000392351 PFASO15067 1338 aa29.27■■■□□ 2.28
HOMER3-202ENST00000392351 LLPHQ9BRT6 129 aaKnown RBP29.27■■■□□ 2.28
HOMER3-202ENST00000392351 BARHL2Q9NY43 387 aa29.27■■■□□ 2.28
HOMER3-202ENST00000392351 ORC3Q9UBD5 711 aaPredicted RBP29.27■■■□□ 2.28
HOMER3-202ENST00000392351 HTTP42858 3142 aa29.27■■■□□ 2.28
HOMER3-202ENST00000392351 STXBP3O00186 592 aa29.26■■■□□ 2.28
HOMER3-202ENST00000392351 OPLAHO14841 1288 aa29.26■■■□□ 2.28
HOMER3-202ENST00000392351 PGK2P07205 417 aa29.26■■■□□ 2.28
HOMER3-202ENST00000392351 FLT3LGP49771 235 aa29.26■■■□□ 2.28
HOMER3-202ENST00000392351 NAPAP54920 295 aa29.26■■■□□ 2.28
HOMER3-202ENST00000392351 CTU1Q7Z7A3 348 aaKnown RBP29.26■■■□□ 2.28
HOMER3-202ENST00000392351 CYP39A1Q9NYL5 469 aa29.26■■■□□ 2.28
HOMER3-202ENST00000392351 MAP2K5Q13163 448 aa29.26■■■□□ 2.27
HOMER3-202ENST00000392351 TYW1BQ6NUM6 668 aa29.26■■■□□ 2.27
HOMER3-202ENST00000392351 RNF207Q6ZRF8 634 aa29.26■■■□□ 2.27
HOMER3-202ENST00000392351 MCF2L2Q86YR7 1114 aa29.26■■■□□ 2.27
HOMER3-202ENST00000392351 K7ELQ4 463 aaPredicted RBP29.25■■■□□ 2.27
HOMER3-202ENST00000392351 RGS2P41220 211 aa29.25■■■□□ 2.27
HOMER3-202ENST00000392351 SLC30A10Q6XR72 485 aa29.25■■■□□ 2.27
HOMER3-202ENST00000392351 DPP9Q86TI2 863 aa29.25■■■□□ 2.27
HOMER3-202ENST00000392351 HSCBQ8IWL3 235 aa29.25■■■□□ 2.27
HOMER3-202ENST00000392351 TBC1D5Q92609 795 aa29.25■■■□□ 2.27
HOMER3-202ENST00000392351 USP6NLQ92738 828 aa29.25■■■□□ 2.27
HOMER3-202ENST00000392351 COBLO75128 1261 aa29.24■■■□□ 2.27
HOMER3-202ENST00000392351 CFBP00751 764 aa29.24■■■□□ 2.27
HOMER3-202ENST00000392351 FDPSP14324 419 aaKnown RBP29.24■■■□□ 2.27
HOMER3-202ENST00000392351 CYP2B6P20813 491 aa29.24■■■□□ 2.27
HOMER3-202ENST00000392351 PRMT2P55345 433 aa29.24■■■□□ 2.27
HOMER3-202ENST00000392351 BAATQ14032 418 aaPredicted RBP29.24■■■□□ 2.27
HOMER3-202ENST00000392351 PPP1R18Q6NYC8 613 aa29.24■■■□□ 2.27
HOMER3-202ENST00000392351 RGS22Q8NE09 1264 aa29.24■■■□□ 2.27
HOMER3-202ENST00000392351 AIFM3Q96NN9 605 aa29.24■■■□□ 2.27
HOMER3-202ENST00000392351 RPS6P62753 249 aaKnown RBP29.23■■■□□ 2.27
HOMER3-202ENST00000392351 SMARCC2Q8TAQ2 1214 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms