RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 MROH5Q6ZUA9 1318 aa12.95□□□□□ -0.34
CCDC57-205ENST00000392346 CNTNAP5Q8WYK1 1306 aa12.95□□□□□ -0.34
CCDC57-205ENST00000392346 DNA2P51530 1060 aa12.95□□□□□ -0.34
CCDC57-205ENST00000392346 RIOK1Q9BRS2 568 aaKnown RBP12.95□□□□□ -0.34
CCDC57-205ENST00000392346 CTAGE9A4FU28 777 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 CREB3O43889 395 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 PLEKP08567 350 aaPredicted RBP12.94□□□□□ -0.34
CCDC57-205ENST00000392346 MYBL2P10244 700 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 IGHMBP2P38935 993 aaKnown RBP12.94□□□□□ -0.34
CCDC57-205ENST00000392346 SH3RF1Q7Z6J0 888 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 CATIPQ7Z7H3 387 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 CELF1Q92879 486 aaKnown RBP12.94□□□□□ -0.34
CCDC57-205ENST00000392346 KDM4CQ9H3R0 1056 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.94□□□□□ -0.343e-6■■■■■ 220.9
CCDC57-205ENST00000392346 MACROD2A1Z1Q3 448 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 USP17L8P0C7I0 530 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 TNNT3P45378 269 aaPredicted RBP12.94□□□□□ -0.34
CCDC57-205ENST00000392346 CRKLP46109 303 aaKnown RBP12.94□□□□□ -0.34
CCDC57-205ENST00000392346 RBM5P52756 815 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCDC57-205ENST00000392346 ITPK1Q13572 414 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 E2F4Q16254 413 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 C1QTNF12Q5T7M4 302 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 CTR9Q6PD62 1173 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 KRT26Q7Z3Y9 468 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 IRF2BP1Q8IU81 584 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 ZNF512BQ96KM6 892 aaPredicted RBP12.94□□□□□ -0.34
CCDC57-205ENST00000392346 PANX2Q96RD6 677 aa12.94□□□□□ -0.34
CCDC57-205ENST00000392346 MYH10P35580 1976 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 B4DLN1 442 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 TULP2O00295 520 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 ZPR1O75312 459 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 NAT1P18440 290 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 ERCC5P28715 1186 aaPredicted RBP12.93□□□□□ -0.34
CCDC57-205ENST00000392346 PAK1Q13153 545 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 PDXDC2PQ6P474 469 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 TXNRD3Q86VQ6 643 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 COL23A1Q86Y22 540 aaPredicted RBP12.93□□□□□ -0.34
CCDC57-205ENST00000392346 TNFRSF25Q93038 417 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 MMS19Q96T76 1030 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 RNF26Q9BY78 433 aaPredicted RBP12.93□□□□□ -0.34
CCDC57-205ENST00000392346 LACRTQ9GZZ8 138 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 FRMD4BQ9Y2L6 1034 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 ERFEQ4G0M1 354 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 TTC30AQ86WT1 665 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 MSL3Q8N5Y2 521 aaKnown RBP12.93□□□□□ -0.34
CCDC57-205ENST00000392346 CEP131Q9UPN4 1083 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 CCDC196A0A1B0GTZ2 297 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 USP17L3A6NCW0 530 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 USP17L4A6NCW7 530 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 PARNO95453 639 aaKnown RBP12.93□□□□□ -0.34
CCDC57-205ENST00000392346 INF2Q27J81 1249 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 FILIP1LQ4L180 1135 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 TCP11X2Q5H9J9 407 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 TTC19Q6DKK2 380 aaPredicted RBP12.93□□□□□ -0.34
CCDC57-205ENST00000392346 TMTC3Q6ZXV5 915 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 USP17L1Q7RTZ2 530 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 SGIP1Q9BQI5 828 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 EHD4Q9H223 541 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 WDR70Q9NW82 654 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 PCNTO95613 3336 aa12.93□□□□□ -0.34
CCDC57-205ENST00000392346 MATR3P43243 847 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCDC57-205ENST00000392346 CASP8Q14790 479 aa12.92□□□□□ -0.34
CCDC57-205ENST00000392346 SLC35G1Q2M3R5 365 aa12.92□□□□□ -0.34
CCDC57-205ENST00000392346 INTS5Q6P9B9 1019 aaKnown RBP12.92□□□□□ -0.34
CCDC57-205ENST00000392346 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
CCDC57-205ENST00000392346 NAPGQ99747 312 aaPredicted RBP12.92□□□□□ -0.34
CCDC57-205ENST00000392346 GNL3LQ9NVN8 582 aaKnown RBP12.92□□□□□ -0.34
CCDC57-205ENST00000392346 CCDC151A5D8V7 595 aa12.92□□□□□ -0.34
CCDC57-205ENST00000392346 RPN1P04843 607 aaKnown RBP12.92□□□□□ -0.34
CCDC57-205ENST00000392346 CXCR5P32302 372 aa12.92□□□□□ -0.34
CCDC57-205ENST00000392346 STAT6P42226 847 aa12.92□□□□□ -0.34
CCDC57-205ENST00000392346 HERVK_113P62684 666 aa12.92□□□□□ -0.34
CCDC57-205ENST00000392346 TRIML1Q8N9V2 468 aa12.92□□□□□ -0.34
CCDC57-205ENST00000392346 CTAGE15A4D2H0 777 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 GOLGA6L9A6NEM1 432 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 CTAGE8P0CG41 777 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 FCER1AP12319 257 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 ATP2C1P98194 919 aaPredicted RBP12.91□□□□□ -0.34
CCDC57-205ENST00000392346 C2orf54Q08AI8 447 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 CTAGE6Q86UF2 777 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 CTAGE4Q8IX94 777 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 ANKRD13CQ8N6S4 541 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 GJA10Q969M2 543 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 PCMTD1Q96MG8 357 aaPredicted RBP12.91□□□□□ -0.34
CCDC57-205ENST00000392346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.91□□□□□ -0.34
CCDC57-205ENST00000392346 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 PDE2AO00408 941 aaPredicted RBP12.91□□□□□ -0.34
CCDC57-205ENST00000392346 MAP2K7O14733 419 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 GNPATO15228 680 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 PARP1P09874 1014 aaKnown RBP12.91□□□□□ -0.34
CCDC57-205ENST00000392346 GRIK5Q16478 980 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 NAALADL2Q58DX5 795 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 MSL1Q68DK7 614 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 WDR59Q6PJI9 974 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 IQCA1Q86XH1 822 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 TRIM47Q96LD4 638 aa12.91□□□□□ -0.34
CCDC57-205ENST00000392346 RNF41Q9H4P4 317 aaPredicted RBP12.91□□□□□ -0.34
CCDC57-205ENST00000392346 FEZ2Q9UHY8 353 aaPredicted RBP12.91□□□□□ -0.34
CCDC57-205ENST00000392346 YY1P25490 414 aa12.9□□□□□ -0.34
CCDC57-205ENST00000392346 MECOMQ03112 1051 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms