RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 NLRP3Q96P20 1036 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 ANKIB1Q9P2G1 1089 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 MAGED1Q9Y5V3 778 aaPredicted RBP6.73□□□□□ -1.33
ERCC4-202ENST00000389138 GPR39O43194 453 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 BMP1P13497 986 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 GIPRP48546 466 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 CLN3Q13286 438 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 TRIM14Q14142 442 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 TMEM67Q5HYA8 995 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 SLC10A5Q5PT55 438 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 C6orf118Q5T5N4 469 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 LRRTM3Q86VH5 581 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 ZSWIM2Q8NEG5 633 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 APPL2Q8NEU8 664 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 PLD4Q96BZ4 506 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 RHOVQ96L33 236 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 PRKRIP1Q9H875 184 aaPredicted RBP6.72□□□□□ -1.33
ERCC4-202ENST00000389138 SMC4Q9NTJ3 1288 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 FBXO10Q9UK96 956 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 PHRF1Q9P1Y6 1649 aaKnown RBP6.72□□□□□ -1.33
ERCC4-202ENST00000389138 SBNO1A3KN83 1393 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 ARHGEF10O15013 1369 aa6.72□□□□□ -1.33
ERCC4-202ENST00000389138 ST20-MTHFSA0A0A6YYL1 179 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 ADCY3O60266 1144 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 CPNE3O75131 537 aaKnown RBP6.71□□□□□ -1.33
ERCC4-202ENST00000389138 PDE1CQ14123 709 aaPredicted RBP6.71□□□□□ -1.33
ERCC4-202ENST00000389138 GBX1Q14549 363 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 STAT4Q14765 748 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 AGAP9Q5VTM2 703 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 KRT28Q7Z3Y7 464 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 CNTD1Q8N815 330 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 KCT2Q8NC54 265 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 IPCEF1Q8WWN9 437 aaPredicted RBP6.71□□□□□ -1.33
ERCC4-202ENST00000389138 CCDC34Q96HJ3 373 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 ZFP42Q96MM3 310 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 NAA15Q9BXJ9 866 aaKnown RBP6.71□□□□□ -1.33
ERCC4-202ENST00000389138 NLRC4Q9NPP4 1024 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 STRN4Q9NRL3 753 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 BLOC1S4Q9NUP1 217 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 BTG4Q9NY30 223 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 DACH1Q9UI36 760 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 TLR6Q9Y2C9 796 aa6.71□□□□□ -1.33
ERCC4-202ENST00000389138 LUC7L2Q9Y383 392 aaKnown RBP6.71□□□□□ -1.33
ERCC4-202ENST00000389138 NRXN1Q9ULB1 1477 aa6.71□□□□□ -1.34
ERCC4-202ENST00000389138 ROCK2O75116 1388 aaKnown RBP6.71□□□□□ -1.34
ERCC4-202ENST00000389138 F5H423 210 aaPredicted RBP6.71□□□□□ -1.34
ERCC4-202ENST00000389138 LCE2BO14633 110 aa6.71□□□□□ -1.34
ERCC4-202ENST00000389138 BACH1O14867 736 aa6.71□□□□□ -1.34
ERCC4-202ENST00000389138 RNF144AP50876 292 aaPredicted RBP6.71□□□□□ -1.34
ERCC4-202ENST00000389138 TBCELQ5QJ74 424 aa6.71□□□□□ -1.34
ERCC4-202ENST00000389138 GALNT5Q7Z7M9 940 aa6.71□□□□□ -1.34
ERCC4-202ENST00000389138 TRIM22Q8IYM9 498 aa6.71□□□□□ -1.34
ERCC4-202ENST00000389138 ABTB2Q8N961 1025 aa6.71□□□□□ -1.34
ERCC4-202ENST00000389138 GIMAP8Q8ND71 665 aaPredicted RBP6.71□□□□□ -1.34
ERCC4-202ENST00000389138 LEO1Q8WVC0 666 aaPredicted RBP6.71□□□□□ -1.34
ERCC4-202ENST00000389138 SNX21Q969T3 373 aa6.71□□□□□ -1.34
ERCC4-202ENST00000389138 CDK5RAP3Q96JB5 506 aa6.71□□□□□ -1.34
ERCC4-202ENST00000389138 TRIM47Q96LD4 638 aa6.71□□□□□ -1.34
ERCC4-202ENST00000389138 ESYT1Q9BSJ8 1104 aa6.71□□□□□ -1.34
ERCC4-202ENST00000389138 AP1M1Q9BXS5 423 aa6.71□□□□□ -1.34
ERCC4-202ENST00000389138 XPO4Q9C0E2 1151 aaKnown RBP6.71□□□□□ -1.34
ERCC4-202ENST00000389138 DDX21Q9NR30 783 aaKnown RBP eCLIP6.71□□□□□ -1.34
ERCC4-202ENST00000389138 C9IYK1 514 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 TOR1BO14657 336 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 INHAP05111 366 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 SETSIPP0DME0 302 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 SDSP20132 328 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 GDF10P55107 478 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 UBE2Q1Q7Z7E8 422 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 CARD10Q9BWT7 1032 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 ZNF395Q9H8N7 513 aaPredicted RBP6.7□□□□□ -1.34
ERCC4-202ENST00000389138 POLMQ9NP87 494 aaPredicted RBP6.7□□□□□ -1.34
ERCC4-202ENST00000389138 GPR52Q9Y2T5 361 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 TECPR2O15040 1411 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 WNK3Q9BYP7 1800 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 DNAJC25-GNG10A0A024R161 153 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 MEN1O00255 615 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 GIPC1O14908 333 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 RFPL3O75679 317 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 MAP3K6O95382 1288 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 MAPK9P45984 424 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 BPIFB3P59826 476 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 PSMC1P62191 440 aaKnown RBP6.7□□□□□ -1.34
ERCC4-202ENST00000389138 FXNQ16595 210 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 GJC2Q5T442 439 aaPredicted RBP6.7□□□□□ -1.34
ERCC4-202ENST00000389138 FOXB2Q5VYV0 432 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 CNNM4Q6P4Q7 775 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 FAM26EQ8N5C1 309 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 ANP32EQ9BTT0 268 aa6.7□□□□□ -1.34
ERCC4-202ENST00000389138 NCOA5Q9HCD5 579 aaKnown RBP6.7□□□□□ -1.34
ERCC4-202ENST00000389138 AKAP12Q02952 1782 aa6.69□□□□□ -1.34
ERCC4-202ENST00000389138 COL24A1Q17RW2 1714 aa6.69□□□□□ -1.34
ERCC4-202ENST00000389138 GTPBP10A4D1E9 387 aaKnown RBP6.69□□□□□ -1.34
ERCC4-202ENST00000389138 K7ENM7 598 aa6.69□□□□□ -1.34
ERCC4-202ENST00000389138 MBD4O95243 580 aa6.69□□□□□ -1.34
ERCC4-202ENST00000389138 PSMA3P25788 255 aa6.69□□□□□ -1.34
ERCC4-202ENST00000389138 SCNN1DP51172 638 aa6.69□□□□□ -1.34
ERCC4-202ENST00000389138 ALDH5A1P51649 535 aaPredicted RBP6.69□□□□□ -1.34
ERCC4-202ENST00000389138 GJA9P57773 515 aa6.69□□□□□ -1.34
ERCC4-202ENST00000389138 GRM1Q13255 1194 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms