RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 LETM2Q2VYF4 491 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 ASPRV1Q53RT3 343 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 CYP26C1Q6V0L0 522 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 KRT222Q8N1A0 295 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 CCDC47Q96A33 483 aaKnown RBP16.8■□□□□ 0.28
SCFD2-201ENST00000388940 TUBB2BQ9BVA1 445 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 COA1Q9GZY4 146 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 ARGLU1Q9NWB6 273 aaPredicted RBP16.8■□□□□ 0.28
SCFD2-201ENST00000388940 ZNF446Q9NWS9 450 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 MTMR4Q9NYA4 1195 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 MAPK8IP1Q9UQF2 711 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 MYO3BQ8WXR4 1341 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 USP17L5A8MUK1 530 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 SNHG28P0DPA3 235 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 CLCN6P51797 869 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 DDR1Q08345 913 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 BMS1Q14692 1282 aaKnown RBP16.8■□□□□ 0.28
SCFD2-201ENST00000388940 COBLL1Q53SF7 1204 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 TTI2Q6NXR4 508 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 ZNF507Q8TCN5 953 aa16.8■□□□□ 0.28
SCFD2-201ENST00000388940 LGALS16A8MUM7 142 aa16.79■□□□□ 0.28
SCFD2-201ENST00000388940 C6orf229H3BNL8 230 aa16.79■□□□□ 0.28
SCFD2-201ENST00000388940 KIF5CO60282 957 aa16.79■□□□□ 0.28
SCFD2-201ENST00000388940 PMS1P54277 932 aaKnown RBP16.79■□□□□ 0.28
SCFD2-201ENST00000388940 AMPD3Q01432 767 aa16.79■□□□□ 0.28
SCFD2-201ENST00000388940 UBXN1Q04323 297 aa16.79■□□□□ 0.28
SCFD2-201ENST00000388940 PPP2R3AQ06190 1150 aa16.79■□□□□ 0.28
SCFD2-201ENST00000388940 RSRC2Q7L4I2 434 aaKnown RBP16.79■□□□□ 0.28
SCFD2-201ENST00000388940 REXO1Q8N1G1 1221 aaKnown RBP16.79■□□□□ 0.28
SCFD2-201ENST00000388940 MB21D1Q8N884 522 aa16.79■□□□□ 0.28
SCFD2-201ENST00000388940 TBCKQ8TEA7 893 aa16.79■□□□□ 0.28
SCFD2-201ENST00000388940 NUP88Q99567 741 aaPredicted RBP16.79■□□□□ 0.28
SCFD2-201ENST00000388940 TRIM9Q9C026 710 aa16.79■□□□□ 0.28
SCFD2-201ENST00000388940 TRIM49BA6NDI0 452 aa16.78■□□□□ 0.28
SCFD2-201ENST00000388940 RNF225M0QZC1 329 aaPredicted RBP16.78■□□□□ 0.28
SCFD2-201ENST00000388940 ERVK-24P63145 666 aa16.78■□□□□ 0.28
SCFD2-201ENST00000388940 CCNE1P24864 410 aa16.78■□□□□ 0.28
SCFD2-201ENST00000388940 GTF2IP78347 998 aa16.78■□□□□ 0.28
SCFD2-201ENST00000388940 GPR161Q8N6U8 529 aaKnown RBP16.78■□□□□ 0.28
SCFD2-201ENST00000388940 MTMR9Q96QG7 549 aa16.78■□□□□ 0.28
SCFD2-201ENST00000388940 PLIN2Q99541 437 aa16.78■□□□□ 0.28
SCFD2-201ENST00000388940 UBA5Q9GZZ9 404 aa16.78■□□□□ 0.28
SCFD2-201ENST00000388940 VAT1LQ9HCJ6 419 aa16.78■□□□□ 0.28
SCFD2-201ENST00000388940 LZTFL1Q9NQ48 299 aa16.78■□□□□ 0.28
SCFD2-201ENST00000388940 MYO1AQ9UBC5 1043 aa16.78■□□□□ 0.28
SCFD2-201ENST00000388940 SWAP70Q9UH65 585 aa16.78■□□□□ 0.28
SCFD2-201ENST00000388940 TRPC5Q9UL62 973 aaPredicted RBP16.78■□□□□ 0.28
SCFD2-201ENST00000388940 BICDL2A1A5D9 508 aa16.77■□□□□ 0.28
SCFD2-201ENST00000388940 PPEF1O14829 653 aaPredicted RBP16.77■□□□□ 0.28
SCFD2-201ENST00000388940 KRT9P35527 623 aa16.77■□□□□ 0.28
SCFD2-201ENST00000388940 GABPB1Q06547 395 aaPredicted RBP16.77■□□□□ 0.28
SCFD2-201ENST00000388940 MMTAG2Q9BU76 263 aaKnown RBP16.77■□□□□ 0.28
SCFD2-201ENST00000388940 PRDM10Q9NQV6 1147 aa16.77■□□□□ 0.28
SCFD2-201ENST00000388940 MAGEC2Q9UBF1 373 aaPredicted RBP16.77■□□□□ 0.28
SCFD2-201ENST00000388940 BIN2Q9UBW5 565 aaPredicted RBP16.77■□□□□ 0.28
SCFD2-201ENST00000388940 ATP6V0A2Q9Y487 856 aa16.77■□□□□ 0.28
SCFD2-201ENST00000388940 ANKRD31Q8N7Z5 1873 aa16.77■□□□□ 0.28
SCFD2-201ENST00000388940 AFF2P51816 1311 aa16.77■□□□□ 0.27
SCFD2-201ENST00000388940 ZRANB2O95218 330 aaKnown RBP eCLIP16.77■□□□□ 0.27
SCFD2-201ENST00000388940 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.27
SCFD2-201ENST00000388940 TECP42680 631 aa16.77■□□□□ 0.27
SCFD2-201ENST00000388940 DNM2P50570 870 aa16.77■□□□□ 0.27
SCFD2-201ENST00000388940 FXR2P51116 673 aaKnown RBP eCLIP16.77■□□□□ 0.27
SCFD2-201ENST00000388940 MEX3CQ5U5Q3 659 aaKnown RBP16.77■□□□□ 0.27
SCFD2-201ENST00000388940 PPP1R18Q6NYC8 613 aa16.77■□□□□ 0.27
SCFD2-201ENST00000388940 P2RX5Q93086 422 aa16.77■□□□□ 0.27
SCFD2-201ENST00000388940 CALML4Q96GE6 196 aa16.77■□□□□ 0.27
SCFD2-201ENST00000388940 TRIM47Q96LD4 638 aa16.77■□□□□ 0.27
SCFD2-201ENST00000388940 DUSP9Q99956 384 aaKnown RBP16.77■□□□□ 0.27
SCFD2-201ENST00000388940 IRX2Q9BZI1 471 aaPredicted RBP16.77■□□□□ 0.27
SCFD2-201ENST00000388940 GREB1LQ9C091 1923 aaPredicted RBP16.76■□□□□ 0.27
SCFD2-201ENST00000388940 ATP8B1O43520 1251 aa16.76■□□□□ 0.27
SCFD2-201ENST00000388940 HOXA7P31268 230 aaPredicted RBP16.76■□□□□ 0.27
SCFD2-201ENST00000388940 PDE4DQ08499 809 aa16.76■□□□□ 0.27
SCFD2-201ENST00000388940 JAKMIP3Q5VZ66 844 aa16.76■□□□□ 0.27
SCFD2-201ENST00000388940 OR8K1Q8NGG5 319 aa16.76■□□□□ 0.27
SCFD2-201ENST00000388940 RABGGTAQ92696 567 aa16.76■□□□□ 0.27
SCFD2-201ENST00000388940 DNAJC7Q99615 494 aa16.76■□□□□ 0.27
SCFD2-201ENST00000388940 EXOC1Q9NV70 894 aa16.76■□□□□ 0.27
SCFD2-201ENST00000388940 CAPN11Q9UMQ6 739 aa16.76■□□□□ 0.27
SCFD2-201ENST00000388940 AKR1B1P15121 316 aa16.76■□□□□ 0.27
SCFD2-201ENST00000388940 ADCY7P51828 1080 aa16.76■□□□□ 0.27
SCFD2-201ENST00000388940 PDIA5Q14554 519 aa16.76■□□□□ 0.27
SCFD2-201ENST00000388940 FAM114A1Q8IWE2 563 aa16.76■□□□□ 0.27
SCFD2-201ENST00000388940 STK17AQ9UEE5 414 aa16.76■□□□□ 0.27
SCFD2-201ENST00000388940 KIF20AO95235 890 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 TTLL1O95922 423 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 SRGNP10124 158 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 TUBB4BP68371 445 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 CNNM4Q6P4Q7 775 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 TMCO3Q6UWJ1 677 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 CREBRFQ8IUR6 639 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 CSGALNACT2Q8N6G5 542 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 RETREG2Q8NC44 543 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 TMEM260Q9NX78 707 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 CDC23Q9UJX2 597 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 FHOD1Q9Y613 1164 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 NRXN2Q9P2S2 1712 aa16.75■□□□□ 0.27
SCFD2-201ENST00000388940 FRMPD2Q68DX3 1309 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms