RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 HOXC12P31275 282 aa5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 ARL4AP40617 200 aa5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 SSRP1Q08945 709 aaKnown RBP5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 SERINC3Q13530 473 aa5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 MCTP1Q6DN14 999 aa5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 IQCEQ6IPM2 695 aa5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 MPZL3Q6UWV2 235 aa5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 ZPBP2Q6X784 338 aa5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 ZNF513Q8N8E2 541 aaPredicted RBP5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 BTN2A2Q8WVV5 523 aa5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 FAM168AQ92567 244 aa5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 MRFAP1L1Q96HT8 127 aa5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 HHIPL1Q96JK4 782 aa5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 MRGPRX3Q96LB0 322 aa5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 NKX2-4Q9H2Z4 354 aa5.02□□□□□ -1.61
RNU6-39P-201ENST00000384344 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 NPHP3-ACAD11A0A0J9YXS1 232 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 FADS2P1A8MWK0 482 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 NRDCO43847 1150 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 GLI1P08151 1106 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 L1CAMP32004 1257 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 SCRN1Q12765 414 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 KCTD13Q8WZ19 329 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 AARSD1Q9BTE6 412 aaKnown RBP5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 G6PC3Q9BUM1 346 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 SPATA9Q9BWV2 254 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 SLC6A17Q9H1V8 727 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 ZSWIM4Q9H7M6 989 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 C19orf73Q9NVV2 129 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 SNTG2Q9NY99 539 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 FAM53CQ9NYF3 392 aa5.01□□□□□ -1.61
RNU6-39P-201ENST00000384344 TRAV20A0A0B4J274 112 aa5□□□□□ -1.61
RNU6-39P-201ENST00000384344 A0A1W2PQU0 124 aa5□□□□□ -1.61
RNU6-39P-201ENST00000384344 PAX4O43316 350 aa5□□□□□ -1.61
RNU6-39P-201ENST00000384344 PAPLNO95428 1278 aa5□□□□□ -1.61
RNU6-39P-201ENST00000384344 APPP05067 770 aa5□□□□□ -1.61
RNU6-39P-201ENST00000384344 ECI1P42126 302 aa5□□□□□ -1.61
RNU6-39P-201ENST00000384344 ERVFC1P60507 584 aa5□□□□□ -1.61
RNU6-39P-201ENST00000384344 PPP2R2AP63151 447 aa5□□□□□ -1.61
RNU6-39P-201ENST00000384344 LAPTM5Q13571 262 aa5□□□□□ -1.61
RNU6-39P-201ENST00000384344 BMS1Q14692 1282 aaKnown RBP5□□□□□ -1.61
RNU6-39P-201ENST00000384344 DPH6Q7L8W6 267 aa5□□□□□ -1.61
RNU6-39P-201ENST00000384344 CDC6Q99741 560 aa5□□□□□ -1.61
RNU6-39P-201ENST00000384344 C19orf44Q9H6X5 657 aa5□□□□□ -1.61
RNU6-39P-201ENST00000384344 MEFVO15553 781 aaPredicted RBP4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 MYO1BO43795 1136 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 NPHS1O60500 1241 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 TRHRP34981 398 aaPredicted RBP4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 CORO7P57737 925 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 KCNAB2Q13303 367 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 RASA3Q14644 834 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 HSF5Q4G112 596 aaPredicted RBP4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 ZC3H12BQ5HYM0 836 aaKnown RBP4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 E4F1Q66K89 784 aaPredicted RBP4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 SLCO6A1Q86UG4 719 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 CABP7Q86V35 215 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 NUP43Q8NFH3 380 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 COPS5Q92905 334 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 MCMBPQ9BTE3 642 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 LGR4Q9BXB1 951 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 LNPKQ9C0E8 428 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 RNF32Q9H0A6 362 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 CRTAC1Q9NQ79 661 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 CLEC1BQ9P126 229 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 PFDN2Q9UHV9 154 aa4.99□□□□□ -1.61
RNU6-39P-201ENST00000384344 KDM2BQ8NHM5 1336 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 PRODHO43272 600 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 PSPNO60542 156 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 SCG5P05408 212 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 THBDP07204 575 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 FGFR1P11362 822 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 PLS3P13797 630 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 PNLIPP16233 465 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 PRKCAP17252 672 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 PDE6BP35913 854 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 GFRA1P56159 465 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 CYP4F8P98187 520 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 TMEM62Q0P6H9 643 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 MAP4K2Q12851 820 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 LONRF2Q1L5Z9 754 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 CCDC144BQ3MJ40 725 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 FYB2Q5VWT5 728 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 OLFML2BQ68BL8 750 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 NSMFQ6X4W1 530 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 SPATC1Q76KD6 591 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 SLC26A8Q96RN1 970 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 JMJD8Q96S16 334 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 MMP19Q99542 508 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 IER2Q9BTL4 223 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 GPRC5CQ9NQ84 441 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 IMPACTQ9P2X3 320 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 EBF1Q9UH73 591 aa4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 CDK11AQ9UQ88 783 aaPredicted RBP4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 YBX2Q9Y2T7 364 aaKnown RBP4.98□□□□□ -1.61
RNU6-39P-201ENST00000384344 TBX1O43435 398 aa4.97□□□□□ -1.61
RNU6-39P-201ENST00000384344 PABPC1P11940 636 aaKnown RBP4.97□□□□□ -1.61
RNU6-39P-201ENST00000384344 LTBRP36941 435 aa4.97□□□□□ -1.61
RNU6-39P-201ENST00000384344 ACBD5Q5T8D3 534 aaPredicted RBP4.97□□□□□ -1.61
RNU6-39P-201ENST00000384344 NLRX1Q86UT6 975 aa4.97□□□□□ -1.61
RNU6-39P-201ENST00000384344 IRF2BP1Q8IU81 584 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms