RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ADAMTS13Q76LX8 1427 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 hCG_2014768A0A024R1R8 64 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 ALDH3A1P30838 453 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 PDIA5Q14554 519 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 KRT31Q15323 416 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 CREG2Q8IUH2 290 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 RBM12BQ8IXT5 1001 aaKnown RBP16.6■□□□□ 0.25
VLDLR-202ENST00000382099 KRI1Q8N9T8 703 aaKnown RBP16.6■□□□□ 0.25
VLDLR-202ENST00000382099 MDM1Q8TC05 714 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 YIPF2Q9BWQ6 316 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 RCCD1A6NED2 376 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 CTNND1O60716 968 aaKnown RBP16.59■□□□□ 0.25
VLDLR-202ENST00000382099 GLI1P08151 1106 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 RXRAP19793 462 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 LACTBP83111 547 aaPredicted RBP16.59■□□□□ 0.25
VLDLR-202ENST00000382099 ATP11AP98196 1134 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 GRIN1Q05586 938 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 BYSLQ13895 437 aaKnown RBP16.59■□□□□ 0.25
VLDLR-202ENST00000382099 RNF220Q5VTB9 566 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 USPL1Q5W0Q7 1092 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 STAMQ92783 540 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 PHACTR1Q9C0D0 580 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 NDST4Q9H3R1 872 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 RBM12Q9NTZ6 932 aaKnown RBP16.59■□□□□ 0.25
VLDLR-202ENST00000382099 ZNHIT6Q9NWK9 470 aaKnown RBP16.59■□□□□ 0.25
VLDLR-202ENST00000382099 DLGAP2Q9P1A6 1054 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 EID1Q9Y6B2 187 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 PRAMEF22A3QJZ6 481 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 LIN7AO14910 233 aaPredicted RBP16.59■□□□□ 0.25
VLDLR-202ENST00000382099 TACC1O75410 805 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 GHRP10912 638 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 CNGA1P29973 690 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 CTNNA1P35221 906 aaKnown RBP16.59■□□□□ 0.25
VLDLR-202ENST00000382099 CYLC1P35663 651 aaPredicted RBP16.59■□□□□ 0.25
VLDLR-202ENST00000382099 KCTD19Q17RG1 926 aaPredicted RBP16.59■□□□□ 0.25
VLDLR-202ENST00000382099 MCMDC2Q4G0Z9 681 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 MPRIPQ6WCQ1 1025 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 APTXQ7Z2E3 356 aaKnown RBP16.59■□□□□ 0.25
VLDLR-202ENST00000382099 IL17REQ8NFR9 667 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 UBLCP1Q8WVY7 318 aaPredicted RBP16.59■□□□□ 0.25
VLDLR-202ENST00000382099 P3H4Q92791 437 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 ZNF274Q96GC6 653 aaPredicted RBP16.59■□□□□ 0.25
VLDLR-202ENST00000382099 LGR6Q9HBX8 967 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 SEC31BQ9NQW1 1179 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 SNX12Q9UMY4 172 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 FLT4P35916 1363 aa16.59■□□□□ 0.25
VLDLR-202ENST00000382099 TTC26A0AVF1 554 aa16.58■□□□□ 0.25
VLDLR-202ENST00000382099 E7EWF7 191 aa16.58■□□□□ 0.25
VLDLR-202ENST00000382099 NCK2O43639 380 aa16.58■□□□□ 0.25
VLDLR-202ENST00000382099 PPP6R2O75170 966 aa16.58■□□□□ 0.25
VLDLR-202ENST00000382099 ERCC5P28715 1186 aaPredicted RBP16.58■□□□□ 0.25
VLDLR-202ENST00000382099 PBX1P40424 430 aa16.58■□□□□ 0.25
VLDLR-202ENST00000382099 TRIM29Q14134 588 aa16.58■□□□□ 0.25
VLDLR-202ENST00000382099 IMMTQ16891 758 aaKnown RBP16.58■□□□□ 0.25
VLDLR-202ENST00000382099 KLHL29Q96CT2 875 aa16.58■□□□□ 0.25
VLDLR-202ENST00000382099 MTRQ99707 1265 aa16.58■□□□□ 0.25
VLDLR-202ENST00000382099 ELAC2Q9BQ52 826 aaKnown RBP16.58■□□□□ 0.25
VLDLR-202ENST00000382099 RHBDL2Q9NX52 303 aa16.58■□□□□ 0.25
VLDLR-202ENST00000382099 ABCC6O95255 1503 aa16.58■□□□□ 0.25
VLDLR-202ENST00000382099 VIMP08670 466 aaKnown RBP16.58■□□□□ 0.24
VLDLR-202ENST00000382099 CD44P16070 742 aaKnown RBP16.58■□□□□ 0.24
VLDLR-202ENST00000382099 MS4A14Q96JA4 679 aa16.58■□□□□ 0.24
VLDLR-202ENST00000382099 MAPK8IP1Q9UQF2 711 aa16.58■□□□□ 0.24
VLDLR-202ENST00000382099 IGF2BP3O00425 579 aaKnown RBP eCLIP16.58■□□□□ 0.24
VLDLR-202ENST00000382099 HIP1RO75146 1068 aa16.58■□□□□ 0.24
VLDLR-202ENST00000382099 AKNAD1Q5T1N1 836 aa16.58■□□□□ 0.24
VLDLR-202ENST00000382099 TAX1BP1Q86VP1 789 aa16.58■□□□□ 0.24
VLDLR-202ENST00000382099 ANKRD24Q8TF21 1146 aa16.58■□□□□ 0.24
VLDLR-202ENST00000382099 MAIP1Q8WWC4 291 aa16.58■□□□□ 0.24
VLDLR-202ENST00000382099 CNKSR1Q969H4 720 aa16.58■□□□□ 0.24
VLDLR-202ENST00000382099 SELENOSQ9BQE4 189 aa16.58■□□□□ 0.24
VLDLR-202ENST00000382099 PCMTD2Q9NV79 361 aa16.58■□□□□ 0.24
VLDLR-202ENST00000382099 SAMD15Q9P1V8 674 aa16.58■□□□□ 0.24
VLDLR-202ENST00000382099 NQO1P15559 274 aaKnown RBP16.57■□□□□ 0.24
VLDLR-202ENST00000382099 KCNA6P17658 529 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 RFC5P40937 340 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 MAGOHP61326 146 aaKnown RBP16.57■□□□□ 0.24
VLDLR-202ENST00000382099 PPP2R2AP63151 447 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 TMEM62Q0P6H9 643 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 TRADDQ15628 312 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 CDC37Q16543 378 aaPredicted RBP16.57■□□□□ 0.24
VLDLR-202ENST00000382099 MAGOHBQ96A72 148 aaKnown RBP16.57■□□□□ 0.24
VLDLR-202ENST00000382099 RPS6KC1Q96S38 1066 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 MLXIPQ9HAP2 919 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 CD2APQ9Y5K6 639 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 COL15A1P39059 1388 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 GOLGA6L10A0A0M3HER8 536 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 SASH1O94885 1247 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 MOCS3O95396 460 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 COPB1P53618 953 aaKnown RBP16.57■□□□□ 0.24
VLDLR-202ENST00000382099 RIPK1Q13546 671 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 ANKRD13CQ8N6S4 541 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 CFAP73A6NFT4 308 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 H7C1W4 665 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 TTF1Q15361 905 aaPredicted RBP16.57■□□□□ 0.24
VLDLR-202ENST00000382099 SPA17Q15506 151 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 KRT40Q6A162 431 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 FNBP4Q8N3X1 1017 aaPredicted RBP16.57■□□□□ 0.24
VLDLR-202ENST00000382099 FGD4Q96M96 766 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 SYT15Q9BQS2 421 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms