RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 CYP7A1P22680 504 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 TMOD1P28289 359 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 EIF4A3P38919 411 aaKnown RBP13.48□□□□□ -0.25
SHOX-203ENST00000381578 MYO1EQ12965 1108 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 DTHD1Q6ZMT9 781 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 TBC1D1Q86TI0 1168 aaPredicted RBP13.48□□□□□ -0.25
SHOX-203ENST00000381578 TEX11Q8IYF3 940 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 MGARPQ8TDB4 240 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 ZNF622Q969S3 477 aaKnown RBP eCLIP13.48□□□□□ -0.25
SHOX-203ENST00000381578 TRIM6Q9C030 488 aaPredicted RBP13.48□□□□□ -0.25
SHOX-203ENST00000381578 ACTN4O43707 911 aaKnown RBP13.47□□□□□ -0.25
SHOX-203ENST00000381578 STARD3NLO95772 234 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 AKNAD1Q5T1N1 836 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 IFNL3Q8IZI9 196 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 ESR2Q92731 530 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 KCNK3O14649 394 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 PLEKP08567 350 aaPredicted RBP13.47□□□□□ -0.25
SHOX-203ENST00000381578 TOB1P50616 345 aaPredicted RBP13.47□□□□□ -0.25
SHOX-203ENST00000381578 NAIF1Q69YI7 327 aaPredicted RBP13.47□□□□□ -0.25
SHOX-203ENST00000381578 TRAPPC11Q7Z392 1133 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 TSGA10Q9BZW7 698 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 RNF41Q9H4P4 317 aaPredicted RBP13.47□□□□□ -0.25
SHOX-203ENST00000381578 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.47□□□□□ -0.25
SHOX-203ENST00000381578 DONSONQ9NYP3 566 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 NOVA2Q9UNW9 492 aaKnown RBP13.47□□□□□ -0.25
SHOX-203ENST00000381578 PLAAQ9Y263 795 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 RGPD2P0DJD1 1756 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 GOLGA6L10A0A0M3HER8 536 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 CDC25CP30307 473 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 PHKA1P46020 1223 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 DNM2P50570 870 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 TCERG1LQ5VWI1 586 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 CCDC25Q86WR0 208 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 FMNL3Q8IVF7 1028 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 CCDC170Q8IYT3 715 aa13.47□□□□□ -0.25
SHOX-203ENST00000381578 PP2D1A8MPX8 630 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 H7C1D1 291 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 PPP1R37O75864 691 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 TCP1P17987 556 aaKnown RBP13.46□□□□□ -0.25
SHOX-203ENST00000381578 HEATR3Q7Z4Q2 680 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 FAM114A1Q8IWE2 563 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 SYNE4Q8N205 404 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 ANKS4BQ8N8V4 417 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 TSEN2Q8NCE0 465 aaKnown RBP13.46□□□□□ -0.25
SHOX-203ENST00000381578 FOXP1Q9H334 677 aaPredicted RBP13.46□□□□□ -0.25
SHOX-203ENST00000381578 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 ENO4A6NNW6 628 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 G3V3G9 751 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 IFNAR1P17181 557 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 TNNC1P63316 161 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 GKAP1Q5VSY0 366 aaPredicted RBP13.46□□□□□ -0.25
SHOX-203ENST00000381578 ATG9AQ7Z3C6 839 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 CCDC13Q8IYE1 715 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 NGLY1Q96IV0 654 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 CNOT6LQ96LI5 555 aaKnown RBP13.46□□□□□ -0.25
SHOX-203ENST00000381578 UBA5Q9GZZ9 404 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 SLC40A1Q9NP59 571 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 SLC39A2Q9NP94 309 aa13.46□□□□□ -0.25
SHOX-203ENST00000381578 RFX5P48382 616 aaPredicted RBP13.46□□□□□ -0.26
SHOX-203ENST00000381578 FERMT2Q96AC1 680 aa13.46□□□□□ -0.26
SHOX-203ENST00000381578 OSBPL9Q96SU4 736 aa13.46□□□□□ -0.26
SHOX-203ENST00000381578 JAG2Q9Y219 1238 aa13.46□□□□□ -0.26
SHOX-203ENST00000381578 BMP15O95972 392 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 PARP9Q8IXQ6 854 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 PAIP2Q9BPZ3 127 aaKnown RBP13.45□□□□□ -0.26
SHOX-203ENST00000381578 AP1M1Q9BXS5 423 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 RBM12Q9NTZ6 932 aaKnown RBP13.45□□□□□ -0.26
SHOX-203ENST00000381578 TBC1D7Q9P0N9 293 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 GTPBP6O43824 516 aaPredicted RBP13.45□□□□□ -0.26
SHOX-203ENST00000381578 RPS6KA5O75582 802 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 ITGA6P23229 1130 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 CRACR2BQ8N4Y2 399 aaPredicted RBP13.45□□□□□ -0.26
SHOX-203ENST00000381578 SPAG5Q96R06 1193 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 FAM167BQ9BTA0 163 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 AGXT2Q9BYV1 514 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 LY9Q9HBG7 655 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 PIH1D3Q9NQM4 214 aaKnown RBP13.45□□□□□ -0.26
SHOX-203ENST00000381578 RWDD2AQ9UIY3 292 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 KDM6AO15550 1401 aaPredicted RBP13.45□□□□□ -0.26
SHOX-203ENST00000381578 A0A087X0B3 334 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 TSPY2A6NKD2 308 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 TMTC2Q8N394 836 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 GPKOWQ92917 476 aaPredicted RBP eCLIP13.45□□□□□ -0.26
SHOX-203ENST00000381578 HPS3Q969F9 1004 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 SPDL1Q96EA4 605 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 SAMD15Q9P1V8 674 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 PCDHA13Q9Y5I0 950 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 TNKSO95271 1327 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 STRCP1A6NGW2 1772 aa13.45□□□□□ -0.26
SHOX-203ENST00000381578 CYP2D7A0A087X1C5 515 aa13.44□□□□□ -0.26
SHOX-203ENST00000381578 PHF20L1A8MW92 1017 aa13.44□□□□□ -0.26
SHOX-203ENST00000381578 PPP1R3GB7ZBB8 358 aa13.44□□□□□ -0.26
SHOX-203ENST00000381578 MYBL1P10243 752 aa13.44□□□□□ -0.26
SHOX-203ENST00000381578 HERVK_113P62684 666 aa13.44□□□□□ -0.26
SHOX-203ENST00000381578 DPYDQ12882 1025 aa13.44□□□□□ -0.26
SHOX-203ENST00000381578 DDB1Q16531 1140 aa13.44□□□□□ -0.26
SHOX-203ENST00000381578 LETM2Q2VYF4 491 aa13.44□□□□□ -0.26
SHOX-203ENST00000381578 ALS2CLQ60I27 953 aa13.44□□□□□ -0.26
SHOX-203ENST00000381578 EMBQ6PCB8 327 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms