RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 ADCY3O60266 1144 aa23.18■■□□□ 1.3
CDPF1-202ENST00000381037 ADD1P35611 737 aaKnown RBP23.18■■□□□ 1.3
CDPF1-202ENST00000381037 NEK4P51957 841 aa23.18■■□□□ 1.3
CDPF1-202ENST00000381037 AK2P54819 239 aa23.18■■□□□ 1.3
CDPF1-202ENST00000381037 TBC1D32Q96NH3 1257 aa23.18■■□□□ 1.3
CDPF1-202ENST00000381037 LARP6Q9BRS8 491 aaKnown RBP23.18■■□□□ 1.3
CDPF1-202ENST00000381037 UPF2Q9HAU5 1272 aaKnown RBP23.18■■□□□ 1.3
CDPF1-202ENST00000381037 PNMA6FA0A0J9YX94 578 aa23.17■■□□□ 1.3
CDPF1-202ENST00000381037 METAP2P50579 478 aaKnown RBP eCLIP23.17■■□□□ 1.3
CDPF1-202ENST00000381037 FBXO11Q86XK2 927 aa23.17■■□□□ 1.3
CDPF1-202ENST00000381037 TNS4Q8IZW8 715 aa23.17■■□□□ 1.3
CDPF1-202ENST00000381037 NPLOC4Q8TAT6 608 aa23.17■■□□□ 1.3
CDPF1-202ENST00000381037 APBA2Q99767 749 aa23.17■■□□□ 1.3
CDPF1-202ENST00000381037 AMNQ9BXJ7 453 aa23.17■■□□□ 1.3
CDPF1-202ENST00000381037 A1CFQ9NQ94 594 aaKnown RBP23.17■■□□□ 1.3
CDPF1-202ENST00000381037 NFIBO00712 420 aa23.16■■□□□ 1.3
CDPF1-202ENST00000381037 PGK2P07205 417 aa23.16■■□□□ 1.3
CDPF1-202ENST00000381037 ELNP15502 786 aa23.16■■□□□ 1.3
CDPF1-202ENST00000381037 GRK4P32298 578 aa23.16■■□□□ 1.3
CDPF1-202ENST00000381037 ZNF792Q3KQV3 632 aa23.16■■□□□ 1.3
CDPF1-202ENST00000381037 HOMER1Q86YM7 354 aa23.16■■□□□ 1.3
CDPF1-202ENST00000381037 SLAIN1Q8ND83 568 aa23.16■■□□□ 1.3
CDPF1-202ENST00000381037 ARMC5Q96C12 935 aa23.16■■□□□ 1.3
CDPF1-202ENST00000381037 BRCA2P51587 3418 aa23.16■■□□□ 1.3
CDPF1-202ENST00000381037 NTRK3Q16288 839 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 CCL14Q16627 93 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 USH1GQ495M9 461 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 DPP9Q86TI2 863 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 CCDC82Q8N4S0 544 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 TRIB2Q92519 343 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 FLRT1Q9NZU1 646 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 TPCN1Q9ULQ1 816 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 NAP1L2Q9ULW6 460 aaPredicted RBP23.15■■□□□ 1.3
CDPF1-202ENST00000381037 CNTNAP5Q8WYK1 1306 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 CCDC196A0A1B0GTZ2 297 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 ANKRD1Q15327 319 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 SLC9C1Q4G0N8 1177 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 ANKRD35Q8N283 1001 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 SH3TC2Q8TF17 1288 aa23.15■■□□□ 1.3
CDPF1-202ENST00000381037 DIS3Q9Y2L1 958 aaKnown RBP23.15■■□□□ 1.3
CDPF1-202ENST00000381037 ZNFX1Q9P2E3 1918 aaKnown RBP23.14■■□□□ 1.3
CDPF1-202ENST00000381037 ABCB11O95342 1321 aa23.14■■□□□ 1.3
CDPF1-202ENST00000381037 OPLAHO14841 1288 aa23.14■■□□□ 1.29
CDPF1-202ENST00000381037 FAM133AQ8N9E0 248 aa23.14■■□□□ 1.29
CDPF1-202ENST00000381037 RGS22Q8NE09 1264 aa23.14■■□□□ 1.29
CDPF1-202ENST00000381037 RRP36Q96EU6 259 aaKnown RBP23.14■■□□□ 1.29
CDPF1-202ENST00000381037 CYP39A1Q9NYL5 469 aa23.14■■□□□ 1.29
CDPF1-202ENST00000381037 PCDHA1Q9Y5I3 950 aa23.14■■□□□ 1.29
CDPF1-202ENST00000381037 DDX11Q96FC9 970 aa23.13■■□□□ 1.29
CDPF1-202ENST00000381037 ABHD8Q96I13 439 aa23.13■■□□□ 1.29
CDPF1-202ENST00000381037 MAML3Q96JK9 1138 aa23.13■■□□□ 1.29
CDPF1-202ENST00000381037 ZNF333Q96JL9 665 aa23.13■■□□□ 1.29
CDPF1-202ENST00000381037 FGD4Q96M96 766 aa23.13■■□□□ 1.29
CDPF1-202ENST00000381037 MAF1Q9H063 256 aa23.13■■□□□ 1.29
CDPF1-202ENST00000381037 NCOA5Q9HCD5 579 aaKnown RBP23.13■■□□□ 1.29
CDPF1-202ENST00000381037 CCT2P78371 535 aaKnown RBP23.12■■□□□ 1.29
CDPF1-202ENST00000381037 OLFML2BQ68BL8 750 aa23.12■■□□□ 1.29
CDPF1-202ENST00000381037 TRMT44Q8IYL2 757 aaKnown RBP23.12■■□□□ 1.29
CDPF1-202ENST00000381037 PIBF1Q8WXW3 757 aa23.12■■□□□ 1.29
CDPF1-202ENST00000381037 PFASO15067 1338 aa23.12■■□□□ 1.29
CDPF1-202ENST00000381037 hCG_1642624A0A1W2PR95 340 aa23.11■■□□□ 1.29
CDPF1-202ENST00000381037 GHRHRQ02643 423 aa23.11■■□□□ 1.29
CDPF1-202ENST00000381037 TBC1D5Q92609 795 aa23.11■■□□□ 1.29
CDPF1-202ENST00000381037 SLC5A4Q9NY91 659 aa23.11■■□□□ 1.29
CDPF1-202ENST00000381037 MRPL11Q9Y3B7 192 aaKnown RBP23.11■■□□□ 1.29
CDPF1-202ENST00000381037 HMGCRP04035 888 aa23.11■■□□□ 1.29
CDPF1-202ENST00000381037 IFNAR1P17181 557 aa23.11■■□□□ 1.29
CDPF1-202ENST00000381037 CNTN2Q02246 1040 aa23.11■■□□□ 1.29
CDPF1-202ENST00000381037 TRIM32Q13049 653 aa23.11■■□□□ 1.29
CDPF1-202ENST00000381037 TRAF1Q13077 416 aa23.11■■□□□ 1.29
CDPF1-202ENST00000381037 BAATQ14032 418 aaPredicted RBP23.11■■□□□ 1.29
CDPF1-202ENST00000381037 MAP3K21Q5TCX8 1036 aa23.11■■□□□ 1.29
CDPF1-202ENST00000381037 NSMFQ6X4W1 530 aa23.11■■□□□ 1.29
CDPF1-202ENST00000381037 V9GY48 417 aaPredicted RBP23.11■■□□□ 1.29
CDPF1-202ENST00000381037 MYH6P13533 1939 aa23.11■■□□□ 1.29
CDPF1-202ENST00000381037 ASTN1O14525 1302 aa23.1■■□□□ 1.29
CDPF1-202ENST00000381037 PFKFB2O60825 505 aa23.1■■□□□ 1.29
CDPF1-202ENST00000381037 INHAP05111 366 aa23.1■■□□□ 1.29
CDPF1-202ENST00000381037 RPS6P62753 249 aaKnown RBP23.1■■□□□ 1.29
CDPF1-202ENST00000381037 RABEP1Q15276 862 aa23.1■■□□□ 1.29
CDPF1-202ENST00000381037 SEC63Q9UGP8 760 aaKnown RBP23.1■■□□□ 1.29
CDPF1-202ENST00000381037 SOWAHBA6NEL2 793 aa23.09■■□□□ 1.29
CDPF1-202ENST00000381037 POTEB2H3BUK9 544 aa23.09■■□□□ 1.29
CDPF1-202ENST00000381037 SCRN1Q12765 414 aa23.09■■□□□ 1.29
CDPF1-202ENST00000381037 ME3Q16798 604 aa23.09■■□□□ 1.29
CDPF1-202ENST00000381037 SLC30A10Q6XR72 485 aa23.09■■□□□ 1.29
CDPF1-202ENST00000381037 RNF207Q6ZRF8 634 aa23.09■■□□□ 1.29
CDPF1-202ENST00000381037 ZNF467Q7Z7K2 595 aaPredicted RBP23.09■■□□□ 1.29
CDPF1-202ENST00000381037 PURBQ96QR8 312 aaKnown RBP23.09■■□□□ 1.29
CDPF1-202ENST00000381037 LARGE1O95461 756 aa23.08■■□□□ 1.29
CDPF1-202ENST00000381037 STK3Q13188 491 aa23.08■■□□□ 1.29
CDPF1-202ENST00000381037 MAMDC4Q6UXC1 1216 aa23.08■■□□□ 1.29
CDPF1-202ENST00000381037 PRPF3O43395 683 aaKnown RBP23.08■■□□□ 1.28
CDPF1-202ENST00000381037 CYP2C19P33261 490 aa23.08■■□□□ 1.28
CDPF1-202ENST00000381037 MCF2L2Q86YR7 1114 aa23.08■■□□□ 1.28
CDPF1-202ENST00000381037 PHKBQ93100 1093 aa23.08■■□□□ 1.28
CDPF1-202ENST00000381037 TINF2Q9BSI4 451 aa23.08■■□□□ 1.28
CDPF1-202ENST00000381037 PLXNA1Q9UIW2 1896 aa23.07■■□□□ 1.28
CDPF1-202ENST00000381037 PTPDC1A2A3K4 754 aa23.07■■□□□ 1.28
CDPF1-202ENST00000381037 HSD17B4P51659 736 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms