RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 CCNT1O60563 726 aaKnown RBP16.1■□□□□ 0.17
CLCN4-201ENST00000380829 GDF11O95390 407 aa16.1■□□□□ 0.17
CLCN4-201ENST00000380829 EEF2P13639 858 aaKnown RBP16.1■□□□□ 0.17
CLCN4-201ENST00000380829 DPYDQ12882 1025 aa16.1■□□□□ 0.17
CLCN4-201ENST00000380829 KARSQ15046 597 aaKnown RBP16.1■□□□□ 0.17
CLCN4-201ENST00000380829 CCDC93Q567U6 631 aa16.1■□□□□ 0.17
CLCN4-201ENST00000380829 TRIML1Q8N9V2 468 aa16.1■□□□□ 0.17
CLCN4-201ENST00000380829 MLKLQ8NB16 471 aa16.1■□□□□ 0.17
CLCN4-201ENST00000380829 BLZF1Q9H2G9 400 aa16.1■□□□□ 0.17
CLCN4-201ENST00000380829 TMX1Q9H3N1 280 aa16.1■□□□□ 0.17
CLCN4-201ENST00000380829 GREB1LQ9C091 1923 aaPredicted RBP16.1■□□□□ 0.17
CLCN4-201ENST00000380829 MYH4Q9Y623 1939 aa16.1■□□□□ 0.17
CLCN4-201ENST00000380829 UTRNP46939 3433 aa16.1■□□□□ 0.17
CLCN4-201ENST00000380829 SLU7O95391 586 aaKnown RBP16.09■□□□□ 0.17
CLCN4-201ENST00000380829 SEPT2Q15019 361 aa16.09■□□□□ 0.17
CLCN4-201ENST00000380829 PDXDC2PQ6P474 469 aa16.09■□□□□ 0.17
CLCN4-201ENST00000380829 TBCKQ8TEA7 893 aa16.09■□□□□ 0.17
CLCN4-201ENST00000380829 DPF2Q92785 391 aa16.09■□□□□ 0.17
CLCN4-201ENST00000380829 MTRQ99707 1265 aa16.09■□□□□ 0.17
CLCN4-201ENST00000380829 USP17L10C9JJH3 530 aa16.09■□□□□ 0.17
CLCN4-201ENST00000380829 POLR3GO15318 223 aaPredicted RBP16.09■□□□□ 0.17
CLCN4-201ENST00000380829 PPP1R11O60927 126 aaPredicted RBP16.09■□□□□ 0.17
CLCN4-201ENST00000380829 SERPINC1P01008 464 aa16.09■□□□□ 0.17
CLCN4-201ENST00000380829 KCNA3P22001 575 aa16.09■□□□□ 0.17
CLCN4-201ENST00000380829 CLCN6P51797 869 aa16.09■□□□□ 0.17
CLCN4-201ENST00000380829 TMC6Q7Z403 805 aa16.09■□□□□ 0.17
CLCN4-201ENST00000380829 SMYD4Q8IYR2 804 aaPredicted RBP16.09■□□□□ 0.17
CLCN4-201ENST00000380829 LARGE2Q8N3Y3 721 aa16.09■□□□□ 0.17
CLCN4-201ENST00000380829 SKILP12757 684 aa16.08■□□□□ 0.17
CLCN4-201ENST00000380829 TXLNAP40222 546 aa16.08■□□□□ 0.17
CLCN4-201ENST00000380829 NEK8Q86SG6 692 aa16.08■□□□□ 0.17
CLCN4-201ENST00000380829 MED15Q96RN5 788 aa16.08■□□□□ 0.17
CLCN4-201ENST00000380829 TSPYL1Q9H0U9 437 aa16.08■□□□□ 0.17
CLCN4-201ENST00000380829 RSPH14Q9UHP6 348 aa16.08■□□□□ 0.17
CLCN4-201ENST00000380829 DACH1Q9UI36 760 aa16.08■□□□□ 0.17
CLCN4-201ENST00000380829 ESYT2A0FGR8 921 aa16.08■□□□□ 0.16
CLCN4-201ENST00000380829 CLRN2A0PK11 232 aa16.08■□□□□ 0.16
CLCN4-201ENST00000380829 PSMD14O00487 310 aa16.08■□□□□ 0.16
CLCN4-201ENST00000380829 PLA2G4AP47712 749 aa16.08■□□□□ 0.16
CLCN4-201ENST00000380829 ADCY7P51828 1080 aa16.08■□□□□ 0.16
CLCN4-201ENST00000380829 GPATCH4Q5T3I0 446 aaKnown RBP16.08■□□□□ 0.16
CLCN4-201ENST00000380829 KLHL10Q6JEL2 608 aa16.08■□□□□ 0.16
CLCN4-201ENST00000380829 TATDN1Q6P1N9 297 aa16.08■□□□□ 0.16
CLCN4-201ENST00000380829 RTKN2Q8IZC4 609 aa16.08■□□□□ 0.16
CLCN4-201ENST00000380829 RASSF8Q8NHQ8 419 aa16.08■□□□□ 0.16
CLCN4-201ENST00000380829 PLIN2Q99541 437 aa16.08■□□□□ 0.16
CLCN4-201ENST00000380829 ZBTB12Q9Y330 459 aaPredicted RBP16.08■□□□□ 0.16
CLCN4-201ENST00000380829 NFE2L3Q9Y4A8 694 aa16.08■□□□□ 0.16
CLCN4-201ENST00000380829 COL4A5P29400 1685 aa16.08■□□□□ 0.16
CLCN4-201ENST00000380829 PNMA6FA0A0J9YX94 578 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 TCP10L2B9ZVM9 353 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 hCG_1984214I3L0E3 225 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 NEMFO60524 1076 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 H2AFXP16104 143 aaPredicted RBP16.07■□□□□ 0.16
CLCN4-201ENST00000380829 UBASH3AP57075 661 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 ICA1Q05084 483 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 CUL4BQ13620 913 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 BMS1Q14692 1282 aaKnown RBP16.07■□□□□ 0.16
CLCN4-201ENST00000380829 PTPN21Q16825 1174 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 ZNF713Q8N859 430 aaPredicted RBP16.07■□□□□ 0.16
CLCN4-201ENST00000380829 KANSL2Q9H9L4 492 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 DISC1Q9NRI5 854 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 SRCAPQ6ZRS2 3230 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
CLCN4-201ENST00000380829 PNMA6AP0CW24 399 aaPredicted RBP16.07■□□□□ 0.16
CLCN4-201ENST00000380829 CD44P16070 742 aaKnown RBP16.07■□□□□ 0.16
CLCN4-201ENST00000380829 STAT6P42226 847 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 SLC1A4P43007 532 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 RSBN1LQ6PCB5 846 aaPredicted RBP16.07■□□□□ 0.16
CLCN4-201ENST00000380829 SIAH1Q8IUQ4 282 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 GSDMAQ96QA5 445 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 CSRNP1Q96S65 589 aa16.07■□□□□ 0.16
CLCN4-201ENST00000380829 OR52Z1P0C646 297 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 TNNT3P45378 269 aaPredicted RBP16.06■□□□□ 0.16
CLCN4-201ENST00000380829 JAG1P78504 1218 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 UBE2SQ16763 222 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 ABCB5Q2M3G0 1257 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 SYT10Q6XYQ8 523 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 PSMD1Q99460 953 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 PYM1Q9BRP8 204 aaKnown RBP16.06■□□□□ 0.16
CLCN4-201ENST00000380829 NYAP2Q9P242 653 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 LAD1O00515 517 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 TRIM66O15016 1216 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 ZBTB5O15062 677 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 ENTPD3O75355 529 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 UBA7P41226 1012 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 SLFN13Q68D06 897 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
CLCN4-201ENST00000380829 ENOX1Q8TC92 643 aaKnown RBP16.06■□□□□ 0.16
CLCN4-201ENST00000380829 SPDYE2BA6NHP3 402 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 PRPHP41219 470 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 STX17P56962 302 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 CCZ1BP86790 482 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 CCZ1P86791 482 aaPredicted RBP16.05■□□□□ 0.16
CLCN4-201ENST00000380829 RRP1BQ14684 758 aaKnown RBP16.05■□□□□ 0.16
CLCN4-201ENST00000380829 NAALADL2Q58DX5 795 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 TMEM179Q6ZVK1 233 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 CREBRFQ8IUR6 639 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 MKL1Q969V6 931 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms