RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 SUPT20HQ8NEM7 779 aa14.21□□□□□ -0.13
VPS16-202ENST00000380445 RAB34Q9BZG1 259 aa14.21□□□□□ -0.13
VPS16-202ENST00000380445 NAALADL2Q58DX5 795 aa14.21□□□□□ -0.14
VPS16-202ENST00000380445 ADGRF4Q8IZF3 695 aa14.21□□□□□ -0.14
VPS16-202ENST00000380445 BAG1Q99933 345 aaPredicted RBP14.21□□□□□ -0.14
VPS16-202ENST00000380445 GLT8D2Q9H1C3 349 aa14.21□□□□□ -0.14
VPS16-202ENST00000380445 JMJD4Q9H9V9 463 aa14.21□□□□□ -0.14
VPS16-202ENST00000380445 ADD3Q9UEY8 706 aaKnown RBP14.21□□□□□ -0.14
VPS16-202ENST00000380445 MRPL12P52815 198 aaKnown RBP14.2□□□□□ -0.14
VPS16-202ENST00000380445 ATP2B2Q01814 1243 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 SYCP1Q15431 976 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 CCDC96Q2M329 555 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 TMEM266Q2M3C6 531 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 COA7Q96BR5 231 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 CALML4Q96GE6 196 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 KANSL2Q9H9L4 492 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 RIC8AQ9NPQ8 531 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 RGPD3A6NKT7 1758 aaPredicted RBP14.2□□□□□ -0.14
VPS16-202ENST00000380445 RGPD4Q7Z3J3 1758 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 PP2D1A8MPX8 630 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 H7C1D1 291 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 CERKLQ49MI3 558 aaPredicted RBP14.2□□□□□ -0.14
VPS16-202ENST00000380445 PPFIBP1Q86W92 1011 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 NELFBQ8WX92 580 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 TSC1Q92574 1164 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 MKL1Q969V6 931 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 NYAP2Q9P242 653 aa14.2□□□□□ -0.14
VPS16-202ENST00000380445 GOLGA6L9A6NEM1 432 aa14.19□□□□□ -0.14
VPS16-202ENST00000380445 LRRC10BA6NIK2 292 aa14.19□□□□□ -0.14
VPS16-202ENST00000380445 ZBTB5O15062 677 aa14.19□□□□□ -0.14
VPS16-202ENST00000380445 RHOBTB3O94955 611 aa14.19□□□□□ -0.14
VPS16-202ENST00000380445 TPM1P09493 284 aa14.19□□□□□ -0.14
VPS16-202ENST00000380445 PPP1R2P41236 205 aa14.19□□□□□ -0.14
VPS16-202ENST00000380445 APTXQ7Z2E3 356 aaKnown RBP14.19□□□□□ -0.14
VPS16-202ENST00000380445 ZSCAN29Q8IWY8 852 aaPredicted RBP14.19□□□□□ -0.14
VPS16-202ENST00000380445 IGSF22Q8N9C0 903 aa14.19□□□□□ -0.14
VPS16-202ENST00000380445 CUL5Q93034 780 aa14.19□□□□□ -0.14
VPS16-202ENST00000380445 KCNQ5Q9NR82 932 aa14.19□□□□□ -0.14
VPS16-202ENST00000380445 AKR1B15C9JRZ8 316 aaPredicted RBP14.19□□□□□ -0.14
VPS16-202ENST00000380445 TECP42680 631 aa14.19□□□□□ -0.14
VPS16-202ENST00000380445 CALCRLQ16602 461 aa14.19□□□□□ -0.14
VPS16-202ENST00000380445 ZNF710Q8N1W2 664 aa14.19□□□□□ -0.14
VPS16-202ENST00000380445 TC2NQ8N9U0 490 aa14.19□□□□□ -0.14
VPS16-202ENST00000380445 NAP1L4Q99733 375 aaKnown RBP14.19□□□□□ -0.14
VPS16-202ENST00000380445 NAA15Q9BXJ9 866 aaKnown RBP14.19□□□□□ -0.14
VPS16-202ENST00000380445 LIMA1Q9UHB6 759 aaKnown RBP14.19□□□□□ -0.14
VPS16-202ENST00000380445 GREB1LQ9C091 1923 aaPredicted RBP14.19□□□□□ -0.14
VPS16-202ENST00000380445 PLCG1P19174 1290 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 PRCPP42785 496 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 FXR2P51116 673 aaKnown RBP eCLIP14.18□□□□□ -0.14
VPS16-202ENST00000380445 KMT5BQ4FZB7 885 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 GRIPAP1Q4V328 841 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 CLEC10AQ8IUN9 316 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 ADSSL1Q8N142 457 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 DCAF4Q8WV16 495 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 PANX2Q96RD6 677 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 TMEM260Q9NX78 707 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 PSMA7O14818 248 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 TCP10Q12799 353 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 PDIA5Q14554 519 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 SLC15A2Q16348 729 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 TMEM139Q8IV31 216 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 MTMR8Q96EF0 704 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 MTMR9Q96QG7 549 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 FAM198AQ9UFP1 575 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.18□□□□□ -0.14
VPS16-202ENST00000380445 ITIH6Q6UXX5 1313 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 ADAMTSL1Q8N6G6 1762 aa14.18□□□□□ -0.14
VPS16-202ENST00000380445 PBX1P40424 430 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 PPP4R3AQ6IN85 833 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 ILDR2Q71H61 639 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 POTEDQ86YR6 584 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 ZFPM1Q8IX07 1006 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 GIMAP8Q8ND71 665 aaPredicted RBP14.17□□□□□ -0.14
VPS16-202ENST00000380445 C7orf25Q9BPX7 421 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 STK17AQ9UEE5 414 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 GDAQ9Y2T3 454 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 MYH4Q9Y623 1939 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 N4BP3O15049 544 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 TXKP42681 527 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 SLC1A4P43007 532 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 ADKP55263 362 aaKnown RBP14.17□□□□□ -0.14
VPS16-202ENST00000380445 TATDN1Q6P1N9 297 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 TMEM179Q6ZVK1 233 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 NOC3LQ8WTT2 800 aaKnown RBP14.17□□□□□ -0.14
VPS16-202ENST00000380445 STK32BQ9NY57 414 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 CGNQ9P2M7 1197 aaKnown RBP14.17□□□□□ -0.14
VPS16-202ENST00000380445 LRWD1Q9UFC0 647 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 SLX4Q8IY92 1834 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 TEX33O43247 280 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 KLRC4O43908 158 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 ENTPD3O75355 529 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 GCFC2P16383 781 aaKnown RBP14.17□□□□□ -0.14
VPS16-202ENST00000380445 CHRNA5P30532 468 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 PTPN21Q16825 1174 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 TCP11X2Q5H9J9 407 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 TTBK2Q6IQ55 1244 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 KCTD1Q719H9 257 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 CNGA4Q8IV77 575 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 C7orf43Q8WVR3 580 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms