RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 KIAA1468Q9P260 1216 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 CLIP2Q9UDT6 1046 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 PLA2G6O60733 806 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 LGR5O75473 907 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 ABCB5Q2M3G0 1257 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 DPCR1Q3MIW9 517 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 ARSIQ5FYB1 569 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 TMEM67Q5HYA8 995 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 APOA5Q6Q788 366 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 ELOA2Q8IYF1 753 aaPredicted RBP8.84□□□□□ -0.99
CDKL5-202ENST00000379996 FSIP1Q8NA03 581 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 SLC44A5Q8NCS7 719 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 LRRN4Q8WUT4 740 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 SHISA4Q96DD7 197 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 TIGD1Q96MW7 591 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 TRIM34Q9BYJ4 488 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 RBM28Q9NW13 759 aaKnown RBP8.84□□□□□ -0.99
CDKL5-202ENST00000379996 RCCD1A6NED2 376 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 SMTNL1A8MU46 457 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 IFIT3O14879 490 aaKnown RBP8.83□□□□□ -1
CDKL5-202ENST00000379996 ASNSP08243 561 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 TROAPQ12815 778 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 RRP1BQ14684 758 aaKnown RBP8.83□□□□□ -1
CDKL5-202ENST00000379996 OTUD7BQ6GQQ9 843 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 SPIRE2Q8WWL2 714 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 CDCA5Q96FF9 252 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 ZBTB21Q9ULJ3 1066 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 KIF3AQ9Y496 699 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 KLF18A0A0U1RQI7 1052 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 CMA1P23946 247 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 NBPF12Q5TAG4 269 aaPredicted RBP8.83□□□□□ -1
CDKL5-202ENST00000379996 SHC4Q6S5L8 630 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 SCYL3Q8IZE3 742 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 KCNG4Q8TDN1 519 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 LZTS2Q9BRK4 669 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.83□□□□□ -1
CDKL5-202ENST00000379996 THSD7BQ9C0I4 1608 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 PASKQ96RG2 1323 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 PPP6R2O75170 966 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 USP2O75604 605 aaPredicted RBP8.83□□□□□ -1
CDKL5-202ENST00000379996 GRM4Q14833 912 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 SLC39A14Q15043 492 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 IFIT1BQ5T764 474 aaKnown RBP8.83□□□□□ -1
CDKL5-202ENST00000379996 SIAH1Q8IUQ4 282 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 ZSCAN29Q8IWY8 852 aaPredicted RBP8.83□□□□□ -1
CDKL5-202ENST00000379996 CEP95Q96GE4 821 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 GMCL1Q96IK5 515 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 TMX1Q9H3N1 280 aa8.83□□□□□ -1
CDKL5-202ENST00000379996 RBBP6Q7Z6E9 1792 aaKnown RBP8.82□□□□□ -1
CDKL5-202ENST00000379996 A0A1B0GVL5 298 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 COL9A1P20849 921 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 GUCY1B3Q02153 619 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 CEBPZQ03701 1054 aaKnown RBP8.82□□□□□ -1
CDKL5-202ENST00000379996 RESP18Q5W5W9 173 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 ARMCX5Q6P1M9 558 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 NUDT18Q6ZVK8 323 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 KRT26Q7Z3Y9 468 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 TEX2Q8IWB9 1127 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 DCAF4Q8WV16 495 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 C12orf42Q96LP6 360 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 SH2D4AQ9H788 454 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 RRAGCQ9HB90 399 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 GOPCQ9HD26 462 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 ANO10Q9NW15 660 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 TMX2Q9Y320 296 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 RLFQ13129 1914 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 CCDC196A0A1B0GTZ2 297 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 GOLGA8BA8MQT2 603 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 FANCGO15287 622 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 DHX16O60231 1041 aaKnown RBP8.82□□□□□ -1
CDKL5-202ENST00000379996 NEMFO60524 1076 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 PRDM1O75626 825 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 PFKFB1P16118 471 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 FAM47AQ5JRC9 791 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 LDLRAD1Q5T700 205 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 ANO1Q5XXA6 986 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 CDAN1Q8IWY9 1227 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 ZNF654Q8IZM8 581 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 ERCC4Q92889 916 aaPredicted RBP8.82□□□□□ -1
CDKL5-202ENST00000379996 AIFM3Q96NN9 605 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 TMEM47Q9BQJ4 181 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 TRIM5Q9C035 493 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 CABP5Q9NP86 173 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 IMPACTQ9P2X3 320 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 SEPT9Q9UHD8 586 aaPredicted RBP8.82□□□□□ -1
CDKL5-202ENST00000379996 PCDHGA4Q9Y5G9 962 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 CCDC69A6NI79 296 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 IKBKBO14920 756 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 BMP6P22004 513 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 NLRP12P59046 1061 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 NT5DC1Q5TFE4 455 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 CATIPQ7Z7H3 387 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 SMAP1Q8IYB5 467 aaPredicted RBP8.82□□□□□ -1
CDKL5-202ENST00000379996 TMUB1Q9BVT8 246 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 SLC12A7Q9Y666 1083 aa8.82□□□□□ -1
CDKL5-202ENST00000379996 PALM3A6NDB9 673 aaPredicted RBP8.81□□□□□ -1
CDKL5-202ENST00000379996 UBE2Q2LH0YL09 131 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 SPTLC2O15270 562 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 PPFIA3O75145 1194 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 NF2P35240 595 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms