RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 F13A1P00488 732 aa16.21■□□□□ 0.19
HERPUD1-203ENST00000379792 ALAS1P13196 640 aa16.21■□□□□ 0.19
HERPUD1-203ENST00000379792 KIF23Q02241 960 aaPredicted RBP16.21■□□□□ 0.19
HERPUD1-203ENST00000379792 RESTQ13127 1097 aa16.21■□□□□ 0.19
HERPUD1-203ENST00000379792 SAFBQ15424 915 aaKnown RBP eCLIP16.21■□□□□ 0.19
HERPUD1-203ENST00000379792 FAM173BQ6P4H8 233 aa16.21■□□□□ 0.19
HERPUD1-203ENST00000379792 CCDC148Q8NFR7 591 aa16.21■□□□□ 0.19
HERPUD1-203ENST00000379792 RASGRP4Q8TDF6 673 aa16.21■□□□□ 0.19
HERPUD1-203ENST00000379792 hCG_1984214I3L0E3 225 aa16.21■□□□□ 0.18
HERPUD1-203ENST00000379792 KRT2P35908 639 aa16.21■□□□□ 0.18
HERPUD1-203ENST00000379792 GNL2Q13823 731 aaKnown RBP16.21■□□□□ 0.18
HERPUD1-203ENST00000379792 NOM1Q5C9Z4 860 aaKnown RBP16.21■□□□□ 0.18
HERPUD1-203ENST00000379792 SNRNP48Q6IEG0 339 aaKnown RBP16.21■□□□□ 0.18
HERPUD1-203ENST00000379792 LBX2Q6XYB7 198 aa16.21■□□□□ 0.18
HERPUD1-203ENST00000379792 ZNF713Q8N859 430 aaPredicted RBP16.21■□□□□ 0.18
HERPUD1-203ENST00000379792 CCDC12Q8WUD4 166 aaPredicted RBP16.21■□□□□ 0.18
HERPUD1-203ENST00000379792 ZMYND12Q9H0C1 365 aa16.21■□□□□ 0.18
HERPUD1-203ENST00000379792 PRDM10Q9NQV6 1147 aa16.21■□□□□ 0.18
HERPUD1-203ENST00000379792 ZNF214Q9UL59 606 aaPredicted RBP16.21■□□□□ 0.18
HERPUD1-203ENST00000379792 PCDHA4Q9UN74 947 aa16.21■□□□□ 0.18
HERPUD1-203ENST00000379792 RIPK3Q9Y572 518 aa16.21■□□□□ 0.18
HERPUD1-203ENST00000379792 OPLAHO14841 1288 aa16.2■□□□□ 0.18
HERPUD1-203ENST00000379792 FDX1P10109 184 aa16.2■□□□□ 0.18
HERPUD1-203ENST00000379792 CALML3P27482 149 aa16.2■□□□□ 0.18
HERPUD1-203ENST00000379792 ADCY7P51828 1080 aa16.2■□□□□ 0.18
HERPUD1-203ENST00000379792 UBE2SQ16763 222 aa16.2■□□□□ 0.18
HERPUD1-203ENST00000379792 BLIDQ8IZY5 108 aa16.2■□□□□ 0.18
HERPUD1-203ENST00000379792 TBC1D5Q92609 795 aa16.2■□□□□ 0.18
HERPUD1-203ENST00000379792 TNPO1Q92973 898 aaKnown RBP16.2■□□□□ 0.18
HERPUD1-203ENST00000379792 PSTPIP2Q9H939 334 aa16.2■□□□□ 0.18
HERPUD1-203ENST00000379792 C6orf50Q9HD87 102 aa16.2■□□□□ 0.18
HERPUD1-203ENST00000379792 TXNRD2Q9NNW7 524 aa16.2■□□□□ 0.18
HERPUD1-203ENST00000379792 RBPJLQ9UBG7 517 aa16.2■□□□□ 0.18
HERPUD1-203ENST00000379792 PARP14Q460N5 1801 aa16.19■□□□□ 0.18
HERPUD1-203ENST00000379792 CNMDO75829 334 aa16.19■□□□□ 0.18
HERPUD1-203ENST00000379792 HSPA8P11142 646 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-203ENST00000379792 PDIA4P13667 645 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-203ENST00000379792 MUM1L1Q5H9M0 696 aa16.19■□□□□ 0.18
HERPUD1-203ENST00000379792 PPP1R18Q6NYC8 613 aa16.19■□□□□ 0.18
HERPUD1-203ENST00000379792 SMCR8Q8TEV9 937 aaPredicted RBP16.19■□□□□ 0.18
HERPUD1-203ENST00000379792 RIC8AQ9NPQ8 531 aa16.19■□□□□ 0.18
HERPUD1-203ENST00000379792 TMEM260Q9NX78 707 aa16.19■□□□□ 0.18
HERPUD1-203ENST00000379792 BIN2Q9UBW5 565 aaPredicted RBP16.19■□□□□ 0.18
HERPUD1-203ENST00000379792 PNMA3Q9UL41 463 aa16.19■□□□□ 0.18
HERPUD1-203ENST00000379792 SLC45A1Q9Y2W3 748 aa16.19■□□□□ 0.18
HERPUD1-203ENST00000379792 SMCHD1A6NHR9 2005 aa16.19■□□□□ 0.18
HERPUD1-203ENST00000379792 ESYT2A0FGR8 921 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 FAM205CA6NFA0 338 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 STAT3P40763 770 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 EARS2Q5JPH6 523 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 JAKMIP3Q5VZ66 844 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 USP17L6PQ6QN14 398 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 IFNL1Q8IU54 200 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 BRMS1Q9HCU9 246 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 MRPL11Q9Y3B7 192 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 ABCB11O95342 1321 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 NFIBO00712 420 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 U2AF2P26368 475 aaKnown RBP eCLIP16.18■□□□□ 0.185e-8■■□□□ 14.2
HERPUD1-203ENST00000379792 GNA11P29992 359 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 HOXA13P31271 388 aaPredicted RBP16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 TRAF1Q13077 416 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 Q3C1V9 767 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 COL13A1Q5TAT6 717 aaPredicted RBP16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 MB21D1Q8N884 522 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 DAGLBQ8NCG7 672 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 RGS22Q8NE09 1264 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 CLEC4DQ8WXI8 215 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 CUL5Q93034 780 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 TRERF1Q96PN7 1200 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 TEX13BQ9BXU2 312 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 FOXP1Q9H334 677 aaPredicted RBP16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 SAGE1Q9NXZ1 904 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 PCDHA6Q9UN73 950 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 PCDHA8Q9Y5H6 950 aa16.18■□□□□ 0.18
HERPUD1-203ENST00000379792 ATP2A1O14983 1001 aa16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 CFBP00751 764 aa16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 MRPL12P52815 198 aaKnown RBP16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 LBX1P52954 281 aa16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 OAZ1P54368 228 aa16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 INHBEP58166 350 aa16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 SREBF2Q12772 1141 aa16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 GALNT17Q6IS24 598 aa16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 NOSTRINQ8IVI9 506 aa16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 TNFRSF25Q93038 417 aa16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 PGBD1Q96JS3 809 aa16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 SPATC1LQ9H0A9 340 aa16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 R3HDMLQ9H3Y0 253 aa16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 ZSCAN16Q9H4T2 348 aaPredicted RBP16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 RNF146Q9NTX7 359 aa16.17■□□□□ 0.18
HERPUD1-203ENST00000379792 M0R2N6 131 aa16.16■□□□□ 0.18
HERPUD1-203ENST00000379792 PIK3AP1Q6ZUJ8 805 aa16.16■□□□□ 0.18
HERPUD1-203ENST00000379792 FAM177A1Q8N128 213 aaPredicted RBP16.16■□□□□ 0.18
HERPUD1-203ENST00000379792 REXO1Q8N1G1 1221 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-203ENST00000379792 ANKRD13CQ8N6S4 541 aa16.16■□□□□ 0.18
HERPUD1-203ENST00000379792 PARK7Q99497 189 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-203ENST00000379792 RABGAP1Q9Y3P9 1069 aa16.16■□□□□ 0.18
HERPUD1-203ENST00000379792 COL11A1P12107 1806 aaPredicted RBP16.16■□□□□ 0.18
HERPUD1-203ENST00000379792 MEIS2O14770 477 aa16.15■□□□□ 0.18
HERPUD1-203ENST00000379792 TM4SF4P48230 202 aa16.15■□□□□ 0.18
HERPUD1-203ENST00000379792 DNM1Q05193 864 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms