RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 MMGT1Q8N4V1 131 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 RNF10Q8N5U6 811 aaKnown RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 NSUN7Q8NE18 718 aaKnown RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 UCMAQ8WVF2 138 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 CHMP6Q96FZ7 201 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 CHP1Q99653 195 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 SAMD15Q9P1V8 674 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 TRIM43BA6NCK2 446 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 CTNND1O60716 968 aaKnown RBP9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 UBOX5O94941 541 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 KRT9P35527 623 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 CCT6AP40227 531 aaKnown RBP9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 MLH1P40692 756 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 CCNFP41002 786 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 SLC44A4Q53GD3 710 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 SH2D4BQ5SQS7 431 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 EMC10Q5UCC4 262 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 ZNF280DQ6N043 979 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 MIGA2Q7L4E1 593 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 TRPM8Q7Z2W7 1104 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 CACNA2D4Q7Z3S7 1137 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 PROSER2Q86WR7 435 aaPredicted RBP9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 CCNJLQ8IV13 435 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 IFT20Q8IY31 132 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 SDR16C5Q8N3Y7 309 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 OGFOD1Q8N543 542 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 SPATA4Q8NEY3 305 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 PCDH18Q9HCL0 1135 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 EPB41L5Q9HCM4 733 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 NOVA2Q9UNW9 492 aaKnown RBP9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 CDK12Q9NYV4 1490 aaPredicted RBP9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 ZMYM6O95789 1325 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 A0A1B0GTH6 734 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 C5orf60A6NFR6 353 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 F8W031 263 aaPredicted RBP9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 H0Y3Z8 333 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 FOXN1O15353 648 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 NDUFA10O95299 355 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 GYPCP04921 128 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 ZNF18P17022 549 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 BMP6P22004 513 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 FBLN1P23142 703 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 CXCR5P32302 372 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 PPP2R2AP63151 447 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 FOXP4Q8IVH2 680 aaPredicted RBP9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 ZNF653Q96CK0 615 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 NEK1Q96PY6 1258 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 IQSEC3Q9UPP2 1182 aaPredicted RBP9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 GMEB1Q9Y692 573 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 SH3TC1Q8TE82 1336 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 TTC37Q6PGP7 1564 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 YEATS4O95619 227 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 NLRP5P59047 1200 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 SLC9C2Q5TAH2 1124 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 FOXB2Q5VYV0 432 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 MDM1Q8TC05 714 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 WDR60Q8WVS4 1066 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 CCDC51Q96ER9 411 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 ANKRD27Q96NW4 1050 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 UBA5Q9GZZ9 404 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 ABCF3Q9NUQ8 709 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 CWC25Q9NXE8 425 aaPredicted RBP9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 EHD2Q9NZN4 543 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 DACH1Q9UI36 760 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 ZNF180Q9UJW8 692 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 LRRC42Q9Y546 428 aa9.36□□□□□ -0.91
NHLRC3-201ENST00000379599 MROH7-TTC4A0A0A0MT08 1334 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 ZSCAN5CA6NGD5 496 aaPredicted RBP9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 KRT86O43790 486 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 ETS2P15036 469 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 HLTFQ14527 1009 aaKnown RBP eCLIP9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 TSR1Q2NL82 804 aaKnown RBP9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 OR52E8Q6IFG1 317 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 CYB5RLQ6IPT4 315 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 DNAJC9Q8WXX5 260 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 TCHPQ9BT92 498 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 DDX23Q9BUQ8 820 aaKnown RBP9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 TMBIM4Q9HC24 238 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 ABHD10Q9NUJ1 306 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 NKX1-2Q9UD57 310 aaPredicted RBP9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 RABL2BQ9UNT1 228 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 ATP8A1Q9Y2Q0 1164 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 CCDC166P0CW27 439 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 KCNA3P22001 575 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 PAFAH1B1P43034 410 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 CACNA2D1P54289 1103 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 NCALDP61601 193 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 METTL16Q86W50 562 aaKnown RBP9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 EXOC8Q8IYI6 725 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 ENOX1Q8TC92 643 aaKnown RBP9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 KCNN1Q92952 543 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 IFT74Q96LB3 600 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 OXCT2Q9BYC2 517 aaPredicted RBP9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 TAOK3Q9H2K8 898 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 CCDC87Q9NVE4 849 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 CNOT8Q9UFF9 292 aaKnown RBP9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 SLC12A6Q9UHW9 1150 aa9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 R3HDM2Q9Y2K5 976 aaKnown RBP9.35□□□□□ -0.91
NHLRC3-201ENST00000379599 SH3GLB1Q9Y371 365 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms