RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 CAMKK2Q96RR4 588 aa16.76■□□□□ 0.27
PRNP-201ENST00000379440 TDRD3Q9H7E2 651 aaKnown RBP16.76■□□□□ 0.27
PRNP-201ENST00000379440 MAPK8IP1Q9UQF2 711 aa16.76■□□□□ 0.27
PRNP-201ENST00000379440 USP17L10C9JJH3 530 aa16.76■□□□□ 0.27
PRNP-201ENST00000379440 TECP42680 631 aa16.76■□□□□ 0.27
PRNP-201ENST00000379440 ADCY7P51828 1080 aa16.76■□□□□ 0.27
PRNP-201ENST00000379440 FKBP1AP62942 108 aaKnown RBP16.76■□□□□ 0.27
PRNP-201ENST00000379440 CBX1P83916 185 aa16.76■□□□□ 0.27
PRNP-201ENST00000379440 CT47A1Q5JQC4 288 aaPredicted RBP16.76■□□□□ 0.27
PRNP-201ENST00000379440 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
PRNP-201ENST00000379440 ZNF592Q92610 1267 aa16.76■□□□□ 0.27
PRNP-201ENST00000379440 IDI2Q9BXS1 227 aa16.76■□□□□ 0.27
PRNP-201ENST00000379440 CCSER1Q9C0I3 900 aa16.76■□□□□ 0.27
PRNP-201ENST00000379440 STK32BQ9NY57 414 aa16.76■□□□□ 0.27
PRNP-201ENST00000379440 RGS17Q9UGC6 210 aaPredicted RBP16.76■□□□□ 0.27
PRNP-201ENST00000379440 GDAQ9Y2T3 454 aa16.76■□□□□ 0.27
PRNP-201ENST00000379440 PNMA6FA0A0J9YX94 578 aa16.75■□□□□ 0.27
PRNP-201ENST00000379440 YDJCA8MPS7 323 aa16.75■□□□□ 0.27
PRNP-201ENST00000379440 EEF2P13639 858 aaKnown RBP16.75■□□□□ 0.27
PRNP-201ENST00000379440 CERKLQ49MI3 558 aaPredicted RBP16.75■□□□□ 0.27
PRNP-201ENST00000379440 APTXQ7Z2E3 356 aaKnown RBP16.75■□□□□ 0.27
PRNP-201ENST00000379440 DHX36Q9H2U1 1008 aaKnown RBP16.75■□□□□ 0.27
PRNP-201ENST00000379440 PI4KBQ9UBF8 816 aa16.75■□□□□ 0.27
PRNP-201ENST00000379440 TEX33O43247 280 aa16.75■□□□□ 0.27
PRNP-201ENST00000379440 EDIL3O43854 480 aa16.75■□□□□ 0.27
PRNP-201ENST00000379440 HDLBPQ00341 1268 aaKnown RBP16.75■□□□□ 0.27
PRNP-201ENST00000379440 NR1I3Q14994 352 aa16.75■□□□□ 0.27
PRNP-201ENST00000379440 NYAP1Q6ZVC0 841 aa16.75■□□□□ 0.27
PRNP-201ENST00000379440 CCDC17Q96LX7 622 aa16.75■□□□□ 0.27
PRNP-201ENST00000379440 hCG_1984214I3L0E3 225 aa16.74■□□□□ 0.27
PRNP-201ENST00000379440 PTPN14Q15678 1187 aa16.74■□□□□ 0.27
PRNP-201ENST00000379440 UBE2SQ16763 222 aa16.74■□□□□ 0.27
PRNP-201ENST00000379440 CEP135Q66GS9 1140 aa16.74■□□□□ 0.27
PRNP-201ENST00000379440 POTEAQ6S8J7 498 aa16.74■□□□□ 0.27
PRNP-201ENST00000379440 CABP7Q86V35 215 aa16.74■□□□□ 0.27
PRNP-201ENST00000379440 ZNF713Q8N859 430 aaPredicted RBP16.74■□□□□ 0.27
PRNP-201ENST00000379440 SERPINA10Q9UK55 444 aa16.74■□□□□ 0.27
PRNP-201ENST00000379440 SIPA1L1O43166 1804 aa16.74■□□□□ 0.27
PRNP-201ENST00000379440 PPIP5K2O43314 1243 aa16.74■□□□□ 0.27
PRNP-201ENST00000379440 TBX2Q13207 712 aaPredicted RBP16.74■□□□□ 0.27
PRNP-201ENST00000379440 ZNF658Q5TYW1 1059 aaPredicted RBP16.74■□□□□ 0.27
PRNP-201ENST00000379440 CDKAL1Q5VV42 579 aa16.74■□□□□ 0.27
PRNP-201ENST00000379440 PRMT6Q96LA8 375 aaPredicted RBP16.74■□□□□ 0.27
PRNP-201ENST00000379440 MYH4Q9Y623 1939 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 A0A1B0GTH6 734 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 GDF11O95390 407 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 TDP2O95551 362 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 PLCG1P19174 1290 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 TXKP42681 527 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 SEPT2Q15019 361 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 GPATCH4Q5T3I0 446 aaKnown RBP16.73■□□□□ 0.27
PRNP-201ENST00000379440 SPECC1LQ69YQ0 1117 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 GREB1LQ9C091 1923 aaPredicted RBP16.73■□□□□ 0.27
PRNP-201ENST00000379440 SLC37A4O43826 429 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 GTF2F1P35269 517 aaKnown RBP eCLIP16.73■□□□□ 0.27
PRNP-201ENST00000379440 PRCPP42785 496 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 ADKP55263 362 aaKnown RBP16.73■□□□□ 0.27
PRNP-201ENST00000379440 SIAH1Q8IUQ4 282 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 TRIM34Q9BYJ4 488 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 TMX1Q9H3N1 280 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 KCND1Q9NSA2 647 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 ZNF646O15015 1829 aaPredicted RBP16.73■□□□□ 0.27
PRNP-201ENST00000379440 TNNI2P48788 182 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 DHX8Q14562 1220 aaKnown RBP16.73■□□□□ 0.27
PRNP-201ENST00000379440 KMT5BQ4FZB7 885 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 KBTBD4Q9NVX7 518 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 RMND1Q9NWS8 449 aa16.73■□□□□ 0.27
PRNP-201ENST00000379440 ZBTB5O15062 677 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 NRDCO43847 1150 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 KLRC4O43908 158 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 TATDN1Q6P1N9 297 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 NELFBQ8WX92 580 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 PPP1R13BQ96KQ4 1090 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 AK8Q96MA6 479 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 MMTAG2Q9BU76 263 aaKnown RBP16.72■□□□□ 0.27
PRNP-201ENST00000379440 RIC8AQ9NPQ8 531 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 SLC1A4P43007 532 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 JAG1P78504 1218 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 PAK1Q13153 545 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 MTMR9Q96QG7 549 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 KANSL2Q9H9L4 492 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 RWDD2AQ9UIY3 292 aa16.72■□□□□ 0.27
PRNP-201ENST00000379440 C10orf71Q711Q0 1435 aa16.71■□□□□ 0.27
PRNP-201ENST00000379440 FAM193AP78312 1265 aa16.71■□□□□ 0.27
PRNP-201ENST00000379440 CALCRLQ16602 461 aa16.71■□□□□ 0.27
PRNP-201ENST00000379440 SLFN13Q68D06 897 aa16.71■□□□□ 0.27
PRNP-201ENST00000379440 TMEM139Q8IV31 216 aa16.71■□□□□ 0.27
PRNP-201ENST00000379440 TC2NQ8N9U0 490 aa16.71■□□□□ 0.27
PRNP-201ENST00000379440 MKL1Q969V6 931 aa16.71■□□□□ 0.27
PRNP-201ENST00000379440 ADD3Q9UEY8 706 aaKnown RBP16.71■□□□□ 0.27
PRNP-201ENST00000379440 CREBRFQ8IUR6 639 aa16.71■□□□□ 0.26
PRNP-201ENST00000379440 IGSF22Q8N9C0 903 aa16.71■□□□□ 0.26
PRNP-201ENST00000379440 MTMR8Q96EF0 704 aa16.71■□□□□ 0.26
PRNP-201ENST00000379440 NYAP2Q9P242 653 aa16.71■□□□□ 0.26
PRNP-201ENST00000379440 PSDA5PKW4 1024 aaPredicted RBP16.7■□□□□ 0.26
PRNP-201ENST00000379440 TRIM49BA6NDI0 452 aa16.7■□□□□ 0.26
PRNP-201ENST00000379440 CLK2P49760 499 aaKnown RBP16.7■□□□□ 0.26
PRNP-201ENST00000379440 CCDC112Q8NEF3 446 aa16.7■□□□□ 0.26
PRNP-201ENST00000379440 CCT6AP40227 531 aaKnown RBP16.7■□□□□ 0.26
PRNP-201ENST00000379440 SNAP25P60880 206 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms