RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 C7orf43Q8WVR3 580 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 GTPBP4Q9BZE4 634 aaKnown RBP11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 GLT8D2Q9H1C3 349 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 DISC1Q9NRI5 854 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 TSKSQ9UJT2 592 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 SCN9AQ15858 1988 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 PNMA6FA0A0J9YX94 578 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 IQCA1LA6NCM1 817 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 KIF2AO00139 706 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 ADAMTS3O15072 1205 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 CCP110O43303 1012 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 OR52Z1P0C646 297 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 ATP1A3P13637 1013 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 CDK11BP21127 795 aaKnown RBP11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 STAT6P42226 847 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 ADCY7P51828 1080 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 SPATA1Q5VX52 437 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 HOMER1Q86YM7 354 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 CTAGE1Q96RT6 745 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 MXD3Q9BW11 206 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 ZNF277Q9NRM2 450 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 PI4KBQ9UBF8 816 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 SYNRGQ9UMZ2 1314 aa11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 ENTPD3O75355 529 aa11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 TUBB4AP04350 444 aa11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 EPHX2P34913 555 aa11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 GTF2F1P35269 517 aaKnown RBP eCLIP11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 UBA7P41226 1012 aa11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 CUL4BQ13620 913 aa11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 TPD52L1Q16890 204 aaPredicted RBP11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 LRRC47Q8N1G4 583 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 DCAF4Q8WV16 495 aa11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 MKL1Q969V6 931 aa11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 NAP1L4Q99733 375 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 TRIM34Q9BYJ4 488 aa11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 NYAP2Q9P242 653 aa11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 PCDH10Q9P2E7 1040 aa11.83□□□□□ -0.52
POLR2J3-201ENST00000379340 ATRNL1Q5VV63 1379 aa11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 HOXA7P31268 230 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 KCNB1Q14721 858 aa11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 ZNF658Q5TYW1 1059 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 RRAGBQ5VZM2 374 aa11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 KIAA0825Q8IV33 1275 aa11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 MTMR8Q96EF0 704 aa11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 UBA5Q9GZZ9 404 aa11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 TMEM60Q9H2L4 133 aa11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 KANSL2Q9H9L4 492 aa11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 VAT1LQ9HCJ6 419 aa11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 RIC8AQ9NPQ8 531 aa11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 HACL1Q9UJ83 578 aa11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 ABT1Q9ULW3 272 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 SYNPO2Q9UMS6 1093 aa11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 PAXBP1Q9Y5B6 917 aa11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 FRMPD2Q68DX3 1309 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-201ENST00000379340 THSD7BQ9C0I4 1608 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 PPP1R3GB7ZBB8 358 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 MPHOSPH10O00566 681 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 CCNT1O60563 726 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 PPP1R2P41236 205 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 RBM5P52756 815 aaKnown RBP eCLIP11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 SPAG1Q07617 926 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 NFIAQ12857 509 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 ARID5BQ14865 1188 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 MCTP2Q6DN12 878 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 ARMCX5Q6P1M9 558 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 TATDN1Q6P1N9 297 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 RASGRP2Q7LDG7 609 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 FCHSD1Q86WN1 690 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 RASSF8Q8NHQ8 419 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 TBCKQ8TEA7 893 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 DPF2Q92785 391 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 CCDC47Q96A33 483 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 CPVLQ9H3G5 476 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 JMJD4Q9H9V9 463 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 RWDD2AQ9UIY3 292 aa11.81□□□□□ -0.52
POLR2J3-201ENST00000379340 A0A1B0GTH6 734 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 ZBTB5O15062 677 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 RPN1P04843 607 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 TNNT1P13805 278 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 MAP2K1Q02750 393 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 GRM1Q13255 1194 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 KARSQ15046 597 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 CCDC96Q2M329 555 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 TMEM266Q2M3C6 531 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 LETM2Q2VYF4 491 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 CERKLQ49MI3 558 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 FILIP1LQ4L180 1135 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 CDKAL1Q5VV42 579 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 TMEM179Q6ZVK1 233 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 CABP7Q86V35 215 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 ADGRF4Q8IZF3 695 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 CCAR2Q8N163 923 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 RAB34Q9BZG1 259 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 VPS33BQ9H267 617 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 GPCPD1Q9NPB8 672 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 FAM198AQ9UFP1 575 aa11.8□□□□□ -0.52
POLR2J3-201ENST00000379340 COL4A5P29400 1685 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms