RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 HDAC1Q13547 482 aaPredicted RBP17.86■□□□□ 0.45
RGP1-201ENST00000378078 C1orf228Q6PIY5 440 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 PCDHA12Q9UN75 941 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 OSBPP22059 807 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 FBXO11Q86XK2 927 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 MMTAG2Q9BU76 263 aaKnown RBP17.86■□□□□ 0.45
RGP1-201ENST00000378078 IFT122Q9HBG6 1241 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 CPSF2Q9P2I0 782 aaKnown RBP17.86■□□□□ 0.45
RGP1-201ENST00000378078 PSMD2Q13200 908 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 CFAP221Q4G0U5 840 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 PDCD6IPQ8WUM4 868 aaKnown RBP17.85■□□□□ 0.45
RGP1-201ENST00000378078 LPIN2Q92539 896 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 PHBP35232 272 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 CDO1Q16878 200 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 FAM71BQ8TC56 605 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 APPBP2Q92624 585 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 HAUS1Q96CS2 278 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 GPR101Q96P66 508 aaPredicted RBP17.85■□□□□ 0.45
RGP1-201ENST00000378078 KRT82Q9NSB4 513 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 ZNF148Q9UQR1 794 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 EIF4G3O43432 1585 aaKnown RBP17.85■□□□□ 0.45
RGP1-201ENST00000378078 GOLGA8FQ08AF8 430 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 GOLGA8DPQ0D2H9 430 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 BFSP1Q12934 665 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 ZCWPW1Q9H0M4 648 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 POLR3EQ9NVU0 708 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 GJA10Q969M2 543 aa17.85■□□□□ 0.45
RGP1-201ENST00000378078 NXF1Q9UBU9 619 aaKnown RBP17.85■□□□□ 0.45
RGP1-201ENST00000378078 SRGAP2CP0DJJ0 459 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 CD58P19256 250 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 MESDQ14696 234 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 TSNAXIP1Q2TAA8 658 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 B4GALNT4Q76KP1 1039 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 CHURC1Q8WUH1 139 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 INTUQ9ULD6 942 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 RWDD4Q6NW29 188 aaKnown RBP17.84■□□□□ 0.45
RGP1-201ENST00000378078 WDR91A4D1P6 747 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 CLIC2O15247 247 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 TRIP13Q15645 432 aaPredicted RBP17.84■□□□□ 0.45
RGP1-201ENST00000378078 TMEM259Q4ZIN3 620 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 YIPF2Q9BWQ6 316 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 MORC3Q14149 939 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 PPP2R5EQ16537 467 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 ZNF827Q17R98 1081 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 KRT27Q7Z3Y8 459 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 FAM178BQ8IXR5 827 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 HSPH1Q92598 858 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 IQGAP2Q13576 1575 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 TROVE2P10155 538 aaKnown RBP eCLIP17.84■□□□□ 0.45
RGP1-201ENST00000378078 PARP10Q53GL7 1025 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 SDCCAG3Q96C92 435 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 RIC8AQ9NPQ8 531 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 KCNJ18B7U540 433 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 CUTAO60888 179 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 KCNJ12Q14500 433 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 ANKRD36BP1Q96IX9 119 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 NUP58Q9BVL2 599 aa17.84■□□□□ 0.45
RGP1-201ENST00000378078 CCDC94Q9BW85 323 aaPredicted RBP17.84■□□□□ 0.45
RGP1-201ENST00000378078 EPHB1P54762 984 aa17.83■□□□□ 0.45
RGP1-201ENST00000378078 TRIM14Q14142 442 aa17.83■□□□□ 0.45
RGP1-201ENST00000378078 DNAAF3Q8N9W5 541 aa17.83■□□□□ 0.45
RGP1-201ENST00000378078 CLIC6Q96NY7 704 aa17.83■□□□□ 0.45
RGP1-201ENST00000378078 USP26Q9BXU7 913 aa17.83■□□□□ 0.45
RGP1-201ENST00000378078 SUCLA2Q9P2R7 463 aaPredicted RBP17.83■□□□□ 0.45
RGP1-201ENST00000378078 LRRN2O75325 713 aa17.83■□□□□ 0.45
RGP1-201ENST00000378078 STAT1P42224 750 aa17.83■□□□□ 0.45
RGP1-201ENST00000378078 CTSWP56202 376 aa17.83■□□□□ 0.45
RGP1-201ENST00000378078 FAM160B1Q5W0V3 765 aa17.83■□□□□ 0.45
RGP1-201ENST00000378078 KRT40Q6A162 431 aa17.83■□□□□ 0.45
RGP1-201ENST00000378078 EFCAB5A4FU69 1503 aa17.83■□□□□ 0.45
RGP1-201ENST00000378078 GOLGA8CPA6NN73 597 aa17.83■□□□□ 0.44
RGP1-201ENST00000378078 EEF1GP26641 437 aaKnown RBP17.83■□□□□ 0.44
RGP1-201ENST00000378078 GCNAQ96QF7 691 aa17.83■□□□□ 0.44
RGP1-201ENST00000378078 C19orf44Q9H6X5 657 aa17.83■□□□□ 0.44
RGP1-201ENST00000378078 MAFGO15525 162 aa17.83■□□□□ 0.44
RGP1-201ENST00000378078 GIGYF1O75420 1035 aaPredicted RBP17.83■□□□□ 0.44
RGP1-201ENST00000378078 ATF2P15336 505 aa17.83■□□□□ 0.44
RGP1-201ENST00000378078 IRX4P78413 519 aa17.83■□□□□ 0.44
RGP1-201ENST00000378078 CABS1Q96KC9 395 aa17.83■□□□□ 0.44
RGP1-201ENST00000378078 NFE2L3Q9Y4A8 694 aa17.83■□□□□ 0.44
RGP1-201ENST00000378078 PPEF1O14829 653 aaPredicted RBP17.83■□□□□ 0.44
RGP1-201ENST00000378078 FMNL1O95466 1100 aaPredicted RBP17.83■□□□□ 0.44
RGP1-201ENST00000378078 APOEP02649 317 aa17.83■□□□□ 0.44
RGP1-201ENST00000378078 ICA1Q05084 483 aa17.83■□□□□ 0.44
RGP1-201ENST00000378078 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.83■□□□□ 0.44
RGP1-201ENST00000378078 STK24Q9Y6E0 443 aa17.83■□□□□ 0.44
RGP1-201ENST00000378078 KCNA6P17658 529 aa17.82■□□□□ 0.44
RGP1-201ENST00000378078 TFAMQ00059 246 aaKnown RBP17.82■□□□□ 0.44
RGP1-201ENST00000378078 MYL7Q01449 175 aa17.82■□□□□ 0.44
RGP1-201ENST00000378078 ABCB5Q2M3G0 1257 aa17.82■□□□□ 0.44
RGP1-201ENST00000378078 FAM180AQ6UWF9 173 aa17.82■□□□□ 0.44
RGP1-201ENST00000378078 SOS1Q07889 1333 aaPredicted RBP17.82■□□□□ 0.44
RGP1-201ENST00000378078 PFDN6O15212 129 aa17.82■□□□□ 0.44
RGP1-201ENST00000378078 ZSCAN10Q96SZ4 725 aaPredicted RBP17.82■□□□□ 0.44
RGP1-201ENST00000378078 E7EWF7 191 aa17.82■□□□□ 0.44
RGP1-201ENST00000378078 ESRRBO95718 433 aa17.82■□□□□ 0.44
RGP1-201ENST00000378078 TRMT10CQ7L0Y3 403 aaKnown RBP17.82■□□□□ 0.44
RGP1-201ENST00000378078 CFAP61Q8NHU2 1237 aa17.82■□□□□ 0.44
RGP1-201ENST00000378078 RASGRP4Q8TDF6 673 aa17.82■□□□□ 0.44
RGP1-201ENST00000378078 ZKSCAN5Q9Y2L8 839 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms