RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 ACVR2BQ13705 512 aa13.51□□□□□ -0.25
SMARCE1-203ENST00000377808 TMEM67Q5HYA8 995 aa13.51□□□□□ -0.25
SMARCE1-203ENST00000377808 MAMDC4Q6UXC1 1216 aa13.51□□□□□ -0.25
SMARCE1-203ENST00000377808 NOL8Q76FK4 1167 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-203ENST00000377808 ADGRF4Q8IZF3 695 aa13.51□□□□□ -0.25
SMARCE1-203ENST00000377808 FGD4Q96M96 766 aa13.51□□□□□ -0.25
SMARCE1-203ENST00000377808 LSG1Q9H089 658 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-203ENST00000377808 FAM184BQ9ULE4 1060 aa13.51□□□□□ -0.25
SMARCE1-203ENST00000377808 SOWAHBA6NEL2 793 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 ASB14A6NK59 587 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 CDC45O75419 566 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 COL6A1P12109 1028 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 SYN1P17600 705 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 BAATQ14032 418 aaPredicted RBP13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 LRRC41Q15345 812 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 SEC23AQ15436 765 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 LRRC26Q2I0M4 334 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 EEPD1Q7L9B9 569 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 RNF180Q86T96 592 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 FAM133AQ8N9E0 248 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 FERMT2Q96AC1 680 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 PURBQ96QR8 312 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 ABHD16BQ9H3Z7 469 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 PNMA2Q9UL42 364 aa13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 COLQQ9Y215 455 aaPredicted RBP13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 DDX49Q9Y6V7 483 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-203ENST00000377808 ALPK3Q96L96 1907 aa13.49□□□□□ -0.25
SMARCE1-203ENST00000377808 WDR19Q8NEZ3 1342 aa13.49□□□□□ -0.25
SMARCE1-203ENST00000377808 SLC27A2O14975 620 aa13.49□□□□□ -0.25
SMARCE1-203ENST00000377808 CENPBP07199 599 aaPredicted RBP13.49□□□□□ -0.25
SMARCE1-203ENST00000377808 CREB3L3Q68CJ9 461 aa13.49□□□□□ -0.25
SMARCE1-203ENST00000377808 SLC30A10Q6XR72 485 aa13.49□□□□□ -0.25
SMARCE1-203ENST00000377808 NFXL1Q6ZNB6 911 aa13.49□□□□□ -0.25
SMARCE1-203ENST00000377808 RNF207Q6ZRF8 634 aa13.49□□□□□ -0.25
SMARCE1-203ENST00000377808 STAG2Q8N3U4 1231 aa13.49□□□□□ -0.25
SMARCE1-203ENST00000377808 NUP133Q8WUM0 1156 aa13.49□□□□□ -0.25
SMARCE1-203ENST00000377808 SENP2Q9HC62 589 aa13.49□□□□□ -0.25
SMARCE1-203ENST00000377808 SYNRGQ9UMZ2 1314 aa13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 KLRF2D3W0D1 207 aa13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 PRC1O43663 620 aa13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 ADCYAP1R1P41586 468 aa13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 QRICH1Q2TAL8 776 aa13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 CCDC144BQ3MJ40 725 aa13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 RNF20Q5VTR2 975 aa13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 CATIPQ7Z7H3 387 aa13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 HOMER1Q86YM7 354 aa13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 FBXO16Q8IX29 292 aaPredicted RBP13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 MB21D2Q8IYB1 491 aaPredicted RBP13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 CLEC4DQ8WXI8 215 aa13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 SPC25Q9HBM1 224 aa13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 ADD3Q9UEY8 706 aaKnown RBP13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 ATP11BQ9Y2G3 1177 aa13.48□□□□□ -0.25
SMARCE1-203ENST00000377808 MCM3APO60318 1980 aa13.47□□□□□ -0.25
SMARCE1-203ENST00000377808 ABCB11O95342 1321 aa13.47□□□□□ -0.25
SMARCE1-203ENST00000377808 C6orf222P0C671 652 aaPredicted RBP13.47□□□□□ -0.25
SMARCE1-203ENST00000377808 MCM5P33992 734 aa13.47□□□□□ -0.25
SMARCE1-203ENST00000377808 ALDH5A1P51649 535 aaPredicted RBP13.47□□□□□ -0.25
SMARCE1-203ENST00000377808 ANTXR2P58335 489 aa13.47□□□□□ -0.25
SMARCE1-203ENST00000377808 RPS6P62753 249 aaKnown RBP13.47□□□□□ -0.25
SMARCE1-203ENST00000377808 HABP4Q5JVS0 413 aaKnown RBP13.47□□□□□ -0.25
SMARCE1-203ENST00000377808 FBXO11Q86XK2 927 aa13.47□□□□□ -0.25
SMARCE1-203ENST00000377808 JMJD4Q9H9V9 463 aa13.47□□□□□ -0.25
SMARCE1-203ENST00000377808 PCDH10Q9P2E7 1040 aa13.47□□□□□ -0.25
SMARCE1-203ENST00000377808 MAD2L2Q9UI95 211 aa13.47□□□□□ -0.25
SMARCE1-203ENST00000377808 SMCHD1A6NHR9 2005 aa13.47□□□□□ -0.25
SMARCE1-203ENST00000377808 ASTN1O14525 1302 aa13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 CCDC69A6NI79 296 aa13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 DUSP11O75319 330 aaKnown RBP13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 RTP1P59025 263 aa13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 GRM4Q14833 912 aa13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 SLC39A5Q6ZMH5 540 aa13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 PIBF1Q8WXW3 757 aa13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 MPHOSPH6Q99547 160 aaKnown RBP13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 MYL10Q9BUA6 226 aa13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 LRRC2Q9BYS8 371 aa13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 PRDM5Q9NQX1 630 aaPredicted RBP13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 GPHNQ9NQX3 736 aaPredicted RBP13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 PRKAG2Q9UGJ0 569 aa13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 MRPL11Q9Y3B7 192 aaKnown RBP13.46□□□□□ -0.25
SMARCE1-203ENST00000377808 PALM3A6NDB9 673 aaPredicted RBP13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 MYADML2A6NDP7 307 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 ADCY6O43306 1168 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 ADAMTS4O75173 837 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 TNFAIP2Q03169 654 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 PDE4DQ08499 809 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 NECTIN1Q15223 517 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 TRIM60Q495X7 471 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 ZNF654Q8IZM8 581 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 CTCFLQ8NI51 663 aaPredicted RBP13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 VTI1AQ96AJ9 217 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 AMNQ9BXJ7 453 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 KATNBL1Q9H079 304 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 LY9Q9HBG7 655 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 PDGFCQ9NRA1 345 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 RBM27Q9P2N5 1060 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 PHF24Q9UPV7 400 aa13.45□□□□□ -0.26
SMARCE1-203ENST00000377808 A0A1W2PQ45 241 aaPredicted RBP13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 A0A1W2PQY0 241 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms