RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 GANCQ8TET4 914 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 LMBR1Q8WVP7 490 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 PIDD1Q9HB75 910 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 LRWD1Q9UFC0 647 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 AGTPBP1Q9UPW5 1226 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 BTBD18B2RXH4 712 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 ECE2O60344 883 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 STK10O94804 968 aaKnown RBP11.92□□□□□ -0.5
HIF3A-205ENST00000377670 GNAT1P11488 350 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 TNNI1P19237 187 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 PPARDQ03181 441 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 MMS19Q96T76 1030 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 NAPGQ99747 312 aaPredicted RBP11.92□□□□□ -0.5
HIF3A-205ENST00000377670 TBC1D7Q9P0N9 293 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 ATP6V0A2Q9Y487 856 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 LMTK2Q8IWU2 1503 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 ADAMTS13Q76LX8 1427 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 H0YCG3 227 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 ATP2A1O14983 1001 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 YY1P25490 414 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 CCDC63Q8NA47 563 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 ZSCAN10Q96SZ4 725 aaPredicted RBP11.92□□□□□ -0.5
HIF3A-205ENST00000377670 CBX8Q9HC52 389 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 TNS3Q68CZ2 1445 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 ARHGEF37A1IGU5 675 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 KCNJ6P48051 423 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 LIG4P49917 911 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 TNNC1P63316 161 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 ATP11AP98196 1134 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 CNGA4Q8IV77 575 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 PTPRUQ92729 1446 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 CLIC6Q96NY7 704 aa11.92□□□□□ -0.5
HIF3A-205ENST00000377670 LUC7L2Q9Y383 392 aaKnown RBP11.92□□□□□ -0.5
HIF3A-205ENST00000377670 DPYSL4O14531 572 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 MCAMP43121 646 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 SREBF2Q12772 1141 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 LIN9Q5TKA1 542 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 DYMQ7RTS9 669 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 PNMA8AQ86V59 439 aaPredicted RBP11.91□□□□□ -0.5
HIF3A-205ENST00000377670 TRMT44Q8IYL2 757 aaKnown RBP11.91□□□□□ -0.5
HIF3A-205ENST00000377670 ELMOD1Q8N336 334 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 GABPB2Q8TAK5 448 aaPredicted RBP11.91□□□□□ -0.5
HIF3A-205ENST00000377670 CTNND2Q9UQB3 1225 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 C1orf167Q5SNV9 1468 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 CAPN9O14815 690 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 CIAO1O76071 339 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 CCND2P30279 289 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 PCK1P35558 622 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 NARFQ9UHQ1 456 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 ZHX2Q9Y6X8 837 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 ERVV-1B6SEH8 477 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 HUNKP57058 714 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 SEPT6Q14141 434 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 KIF9Q9HAQ2 790 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 PI4KBQ9UBF8 816 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 ELP1O95163 1332 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 PPP2R5BQ15173 497 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 PLA2G4DQ86XP0 818 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 FANCBQ8NB91 859 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 PPFIBP2Q8ND30 876 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 TSGA10Q9BZW7 698 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 VPS16Q9H269 839 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 SETBP1Q9Y6X0 1596 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 E7EVH7 732 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 INTS8Q75QN2 995 aaKnown RBP11.91□□□□□ -0.5
HIF3A-205ENST00000377670 SND1Q7KZF4 910 aaKnown RBP eCLIP11.91□□□□□ -0.5
HIF3A-205ENST00000377670 DPF3Q92784 378 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 CFAP57Q96MR6 1250 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 IWS1Q96ST2 819 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 GJB4Q9NTQ9 266 aa11.91□□□□□ -0.5
HIF3A-205ENST00000377670 SMCO2A6NFE2 343 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 SPDYE16A6NNV3 312 aaPredicted RBP11.9□□□□□ -0.5
HIF3A-205ENST00000377670 PNOCQ13519 176 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 SPDYE2Q495Y8 402 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 PNMA1Q8ND90 353 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 GPT2Q8TD30 523 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 DYNLL2Q96FJ2 89 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 LRRIQ4A6NIV6 560 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 EXOC3O60645 756 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 PRR16Q569H4 304 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 TBC1D9BQ66K14 1250 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 MIS18BP1Q6P0N0 1132 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 NLRP7Q8WX94 980 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 AIFM3Q96NN9 605 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 LMCD1Q9NZU5 365 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 ADD2P35612 726 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 CLEC4GQ6UXB4 293 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 EEF2KMTQ96G04 330 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 FAM204AQ9H8W3 233 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 KANSL2Q9H9L4 492 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 CARMIL3Q8ND23 1372 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 CYP19A1P11511 503 aaPredicted RBP11.9□□□□□ -0.5
HIF3A-205ENST00000377670 MYSM1Q5VVJ2 828 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 FASTKD5Q7L8L6 764 aaKnown RBP11.9□□□□□ -0.5
HIF3A-205ENST00000377670 STMN2Q93045 179 aa11.9□□□□□ -0.5
HIF3A-205ENST00000377670 CELF2O95319 508 aaKnown RBP11.89□□□□□ -0.51
HIF3A-205ENST00000377670 IGSF22Q8N9C0 903 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 PRPF31Q8WWY3 499 aaKnown RBP11.89□□□□□ -0.51
HIF3A-205ENST00000377670 CDHR1Q96JP9 859 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 MTRF1LQ9UGC7 380 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms