RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 LZTS2Q9BRK4 669 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 G3BP2Q9UN86 482 aaKnown RBP15□□□□□ -0.01
COL4A1-201ENST00000375820 KDM3AQ9Y4C1 1321 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 RPSAP08865 295 aaKnown RBP15□□□□□ -0.01
COL4A1-201ENST00000375820 BTDP43251 543 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 DMP1Q13316 513 aaPredicted RBP15□□□□□ -0.01
COL4A1-201ENST00000375820 GNPTABQ3T906 1256 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 NOSTRINQ8IVI9 506 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 MORC4Q8TE76 937 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 NUCKS1Q9H1E3 243 aaKnown RBP15□□□□□ -0.01
COL4A1-201ENST00000375820 PCIF1Q9H4Z3 704 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 ARMCX3Q9UH62 379 aaPredicted RBP15□□□□□ -0.01
COL4A1-201ENST00000375820 TMEM232C9JQI7 657 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 RASSF2P50749 326 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 GUCY2DQ02846 1103 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 OR8K1Q8NGG5 319 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 CCDC68Q9H2F9 335 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 PCDHB4Q9Y5E5 795 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 KLRF2D3W0D1 207 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 RPN1P04843 607 aaKnown RBP15□□□□□ -0.01
COL4A1-201ENST00000375820 YWHAEP62258 255 aaKnown RBP15□□□□□ -0.01
COL4A1-201ENST00000375820 KCTD1Q719H9 257 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 RNF217Q8TC41 542 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 MAIP1Q8WWC4 291 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 KIAA1468Q9P260 1216 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 ARPP21Q9UBL0 812 aaPredicted RBP15□□□□□ -0.01
COL4A1-201ENST00000375820 HYOU1Q9Y4L1 999 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 IL13P35225 146 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 ZKSCAN8Q15776 578 aaPredicted RBP15□□□□□ -0.01
COL4A1-201ENST00000375820 PNMA1Q8ND90 353 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 BTBD18B2RXH4 712 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 TRIM58Q8NG06 486 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 PALD1Q9ULE6 856 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 GNA14O95837 355 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 SULF1Q8IWU6 871 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 TNKSO95271 1327 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 NEURL1BA8MQ27 555 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 CXCR5P32302 372 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 OSTNP61366 133 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 TTLL7Q6ZT98 887 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 CAPS2Q9BXY5 557 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 PRAG1Q86YV5 1406 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 GNL1P36915 607 aaPredicted RBP14.99□□□□□ -0.01
COL4A1-201ENST00000375820 FBXO11Q86XK2 927 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 SPC25Q9HBM1 224 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 IRAK4Q9NWZ3 460 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 AKT3Q9Y243 479 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 GRIN2AQ12879 1464 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 LRRN2O75325 713 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 EEF1GP26641 437 aaKnown RBP14.99□□□□□ -0.01
COL4A1-201ENST00000375820 HESX1Q9UBX0 185 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 CCPG1Q9ULG6 757 aa14.99□□□□□ -0.01
COL4A1-201ENST00000375820 MEIS1O00470 390 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 MGEA5O60502 916 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 INPP1P49441 399 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 TRIP13Q15645 432 aaPredicted RBP14.98□□□□□ -0.01
COL4A1-201ENST00000375820 GRK7Q8WTQ7 553 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 OLA1Q9NTK5 396 aaKnown RBP14.98□□□□□ -0.01
COL4A1-201ENST00000375820 KIAA1024Q9UPX6 916 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 A6NJR5 290 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 OR52Z1P0C646 297 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 BANK1Q8NDB2 785 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 CHURC1Q8WUH1 139 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 ADPGKQ9BRR6 497 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 TEKT3Q9BXF9 490 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 ATP8A2Q9NTI2 1148 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 SYCP2Q9BX26 1530 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 CLIC2O15247 247 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 MYL7Q01449 175 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 CDC26Q8NHZ8 85 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 TSPYL2Q9H2G4 693 aaPredicted RBP14.98□□□□□ -0.01
COL4A1-201ENST00000375820 SLC16A2P36021 539 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 EEPD1Q7L9B9 569 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 LCA5Q86VQ0 697 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 GRAMD1CQ8IYS0 662 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 GOLGA8SH3BPF8 625 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 GCKP35557 465 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 STAG1Q8WVM7 1258 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 LRGUKQ96M69 825 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 ANLNQ9NQW6 1124 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.98□□□□□ -0.01
COL4A1-201ENST00000375820 USP21Q9UK80 565 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 BAG5Q9UL15 447 aa14.98□□□□□ -0.01
COL4A1-201ENST00000375820 BNIP3LO60238 219 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 PTGDRQ13258 359 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 PABPC4Q13310 644 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL4A1-201ENST00000375820 MUM1L1Q5H9M0 696 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 NEK8Q86SG6 692 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 PDE11AQ9HCR9 933 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 TBK1Q9UHD2 729 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 ICA1Q05084 483 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 BRD3Q15059 726 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 ADALQ6DHV7 355 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 ZBTB33Q86T24 672 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 BCAS4Q8TDM0 211 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 IFT122Q9HBG6 1241 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 NRBP1Q9UHY1 535 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 RPS8P62241 208 aaKnown RBP14.97□□□□□ -0.01
COL4A1-201ENST00000375820 C2orf54Q08AI8 447 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 CCNYQ8ND76 341 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms