RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 KCNJ14Q9UNX9 436 aa14.46□□□□□ -0.09
MSH5-204ENST00000375755 ITIH6Q6UXX5 1313 aa14.46□□□□□ -0.09
MSH5-204ENST00000375755 CCDC172P0C7W6 258 aa14.46□□□□□ -0.09
MSH5-204ENST00000375755 MCM3P25205 808 aa14.46□□□□□ -0.09
MSH5-204ENST00000375755 CPLX2Q6PUV4 134 aaKnown RBP14.46□□□□□ -0.09
MSH5-204ENST00000375755 ZNF654Q8IZM8 581 aa14.46□□□□□ -0.09
MSH5-204ENST00000375755 TGFBRAP1Q8WUH2 860 aa14.46□□□□□ -0.09
MSH5-204ENST00000375755 CTAGE1Q96RT6 745 aa14.46□□□□□ -0.09
MSH5-204ENST00000375755 CHP1Q99653 195 aa14.46□□□□□ -0.09
MSH5-204ENST00000375755 CRNKL1Q9BZJ0 848 aaKnown RBP14.46□□□□□ -0.09
MSH5-204ENST00000375755 ZNF219Q9P2Y4 722 aaPredicted RBP14.46□□□□□ -0.09
MSH5-204ENST00000375755 AFMP43652 599 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 PPFIA1Q13136 1202 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 SLC44A5Q8NCS7 719 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 SHISA4Q96DD7 197 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 CAPS2Q9BXY5 557 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 PDGFDQ9GZP0 370 aaPredicted RBP14.45□□□□□ -0.1
MSH5-204ENST00000375755 TFR2Q9UP52 801 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 PCDHB6Q9Y5E3 794 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 PDS5AQ29RF7 1337 aaKnown RBP14.45□□□□□ -0.1
MSH5-204ENST00000375755 TARSL2A2RTX5 802 aaKnown RBP14.45□□□□□ -0.1
MSH5-204ENST00000375755 PSMD14O00487 310 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 PPEF1O14829 653 aaPredicted RBP14.45□□□□□ -0.1
MSH5-204ENST00000375755 PLSCR1O15162 318 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 HOXA10P31260 410 aaPredicted RBP14.45□□□□□ -0.1
MSH5-204ENST00000375755 INPP5BP32019 993 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 CCNI2Q6ZMN8 369 aaPredicted RBP14.45□□□□□ -0.1
MSH5-204ENST00000375755 MAPKAPK5Q8IW41 473 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 ESR2Q92731 530 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 ZSCAN10Q96SZ4 725 aaPredicted RBP14.45□□□□□ -0.1
MSH5-204ENST00000375755 NUP88Q99567 741 aaPredicted RBP14.45□□□□□ -0.1
MSH5-204ENST00000375755 RNF41Q9H4P4 317 aaPredicted RBP14.45□□□□□ -0.1
MSH5-204ENST00000375755 KIAA1551Q9HCM1 1747 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 A0A087X0B3 334 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 ERICH2A1L162 156 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 F8W031 263 aaPredicted RBP14.45□□□□□ -0.1
MSH5-204ENST00000375755 DPYDQ12882 1025 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 RTN1Q16799 776 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 TTC19Q6DKK2 380 aaPredicted RBP14.45□□□□□ -0.1
MSH5-204ENST00000375755 KANK3Q6NY19 840 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 HINFPQ9BQA5 517 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 CSRNP2Q9H175 543 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 SAMM50Q9Y512 469 aa14.45□□□□□ -0.1
MSH5-204ENST00000375755 MAST2Q6P0Q8 1798 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 GOLGA6BA6NDN3 693 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 PPP1R3GB7ZBB8 358 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 EIF3HO15372 352 aaKnown RBP eCLIP14.44□□□□□ -0.1
MSH5-204ENST00000375755 PLEKHA8P1O95397 391 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 SRGNP10124 158 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 GNGT1P63211 74 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 KRT31Q15323 416 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 DOK7Q18PE1 504 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 CNPY4Q8N129 248 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 BANK1Q8NDB2 785 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 WDR66Q8TBY9 1149 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 CEP83Q9Y592 693 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 SAR1BQ9Y6B6 198 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 COL11A2P13942 1736 aaPredicted RBP14.44□□□□□ -0.1
MSH5-204ENST00000375755 KLRG2A4D1S0 409 aaPredicted RBP14.44□□□□□ -0.1
MSH5-204ENST00000375755 BBOX1O75936 387 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 BRD2P25440 801 aaKnown RBP14.44□□□□□ -0.1
MSH5-204ENST00000375755 KRT9P35527 623 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 DIS3L2Q8IYB7 885 aaKnown RBP14.44□□□□□ -0.1
MSH5-204ENST00000375755 FANCBQ8NB91 859 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 VPS16Q9H269 839 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 KCNQ5Q9NR82 932 aa14.44□□□□□ -0.1
MSH5-204ENST00000375755 EPN1Q9Y6I3 576 aaPredicted RBP14.44□□□□□ -0.1
MSH5-204ENST00000375755 N4BP3O15049 544 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 NDUFA10O95299 355 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 ATP2B4P23634 1241 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 GTF2IP78347 998 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 MFSD14BQ5SR56 506 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 POTEDQ86YR6 584 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 ZNF579Q8NAF0 562 aaKnown RBP14.43□□□□□ -0.1
MSH5-204ENST00000375755 FAM212AQ96EL1 285 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.43□□□□□ -0.1
MSH5-204ENST00000375755 SRPRBQ9Y5M8 271 aaKnown RBP14.43□□□□□ -0.1
MSH5-204ENST00000375755 CDK5RAP2Q96SN8 1893 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 LAMB1P07942 1786 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 SHTN1A0MZ66 631 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 EN1Q05925 392 aaPredicted RBP14.43□□□□□ -0.1
MSH5-204ENST00000375755 SSRP1Q08945 709 aaKnown RBP14.43□□□□□ -0.1
MSH5-204ENST00000375755 EZH2Q15910 746 aaKnown RBP14.43□□□□□ -0.1
MSH5-204ENST00000375755 RTFDC1Q9BY42 306 aaPredicted RBP14.43□□□□□ -0.1
MSH5-204ENST00000375755 DONSONQ9NYP3 566 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 PDE2AO00408 941 aaPredicted RBP14.43□□□□□ -0.1
MSH5-204ENST00000375755 FMNL1O95466 1100 aaPredicted RBP14.43□□□□□ -0.1
MSH5-204ENST00000375755 MMP1P03956 469 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 IFIT1BQ5T764 474 aaKnown RBP14.43□□□□□ -0.1
MSH5-204ENST00000375755 PAPD7Q5XG87 772 aaKnown RBP14.43□□□□□ -0.1
MSH5-204ENST00000375755 PRPF38AQ8NAV1 312 aaKnown RBP14.43□□□□□ -0.1
MSH5-204ENST00000375755 CRAMP1Q96RY5 1269 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 CTNND2Q9UQB3 1225 aa14.43□□□□□ -0.1
MSH5-204ENST00000375755 MYH6P13533 1939 aa14.42□□□□□ -0.1
MSH5-204ENST00000375755 LTBP1Q14766 1721 aa14.42□□□□□ -0.1
MSH5-204ENST00000375755 IL1R1P14778 569 aa14.42□□□□□ -0.1
MSH5-204ENST00000375755 VEGFAP15692 232 aaPredicted RBP14.42□□□□□ -0.1
MSH5-204ENST00000375755 USP8P40818 1118 aa14.42□□□□□ -0.1
MSH5-204ENST00000375755 BTDP43251 543 aa14.42□□□□□ -0.1
MSH5-204ENST00000375755 NR5A1Q13285 461 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms