RNA–Protein interactions for RNA: ENST00000375638.7

C6orf48-203, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-203ENST00000375638 SPZ1Q9BXG8 430 aa20.25■□□□□ 0.83
C6orf48-203ENST00000375638 AMNQ9BXJ7 453 aa20.25■□□□□ 0.83
C6orf48-203ENST00000375638 A1CFQ9NQ94 594 aaKnown RBP20.25■□□□□ 0.83
C6orf48-203ENST00000375638 PDRG1Q9NUG6 133 aa20.25■□□□□ 0.83
C6orf48-203ENST00000375638 RBM28Q9NW13 759 aaKnown RBP20.25■□□□□ 0.83
C6orf48-203ENST00000375638 FLRT1Q9NZU1 646 aa20.25■□□□□ 0.83
C6orf48-203ENST00000375638 DIS3Q9Y2L1 958 aaKnown RBP20.25■□□□□ 0.83
C6orf48-203ENST00000375638 PFASO15067 1338 aa20.25■□□□□ 0.83
C6orf48-203ENST00000375638 DNAJC25-GNG10A0A024R161 153 aa20.24■□□□□ 0.83
C6orf48-203ENST00000375638 CAPN15O75808 1086 aa20.24■□□□□ 0.83
C6orf48-203ENST00000375638 PLEKHA8P1O95397 391 aa20.24■□□□□ 0.83
C6orf48-203ENST00000375638 CCL5P13501 91 aa20.24■□□□□ 0.83
C6orf48-203ENST00000375638 RCAN1P53805 252 aa20.24■□□□□ 0.83
C6orf48-203ENST00000375638 TRIM32Q13049 653 aa20.24■□□□□ 0.83
C6orf48-203ENST00000375638 MTFR1Q15390 333 aa20.24■□□□□ 0.83
C6orf48-203ENST00000375638 RTN1Q16799 776 aa20.24■□□□□ 0.83
C6orf48-203ENST00000375638 OLFML2BQ68BL8 750 aa20.24■□□□□ 0.83
C6orf48-203ENST00000375638 NSMFQ6X4W1 530 aa20.24■□□□□ 0.83
C6orf48-203ENST00000375638 MAML3Q96JK9 1138 aa20.24■□□□□ 0.83
C6orf48-203ENST00000375638 ABCB11O95342 1321 aa20.24■□□□□ 0.83
C6orf48-203ENST00000375638 PNMA6FA0A0J9YX94 578 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 GOLGA8AA7E2F4 631 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 GOLGA8BA8MQT2 603 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 POTEB2H3BUK9 544 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 NFIBO00712 420 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 PRKAR2AP13861 404 aaKnown RBP20.23■□□□□ 0.83
C6orf48-203ENST00000375638 TRAF1Q13077 416 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 TMTC3Q6ZXV5 915 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 SRBD1Q8N5C6 995 aaKnown RBP20.23■□□□□ 0.83
C6orf48-203ENST00000375638 CLEC4DQ8WXI8 215 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 PIBF1Q8WXW3 757 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 RRP36Q96EU6 259 aaKnown RBP20.23■□□□□ 0.83
C6orf48-203ENST00000375638 IL17RAQ96F46 866 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 RNF208Q9H0X6 261 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 UNC93B1Q9H1C4 597 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 CYP39A1Q9NYL5 469 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 ZNF236Q9UL36 1845 aa20.23■□□□□ 0.83
C6orf48-203ENST00000375638 CYP2C19P33261 490 aa20.22■□□□□ 0.83
C6orf48-203ENST00000375638 METAP2P50579 478 aaKnown RBP eCLIP20.22■□□□□ 0.831e-9■■■□□ 14.6
C6orf48-203ENST00000375638 TOB2Q14106 344 aaPredicted RBP20.22■□□□□ 0.83
C6orf48-203ENST00000375638 PPP2R5BQ15173 497 aa20.22■□□□□ 0.83
C6orf48-203ENST00000375638 CMTR1Q8N1G2 835 aaKnown RBP20.22■□□□□ 0.83
C6orf48-203ENST00000375638 CCDC82Q8N4S0 544 aa20.22■□□□□ 0.83
C6orf48-203ENST00000375638 MRPL11Q9Y3B7 192 aaKnown RBP20.22■□□□□ 0.83
C6orf48-203ENST00000375638 PCDHA1Q9Y5I3 950 aa20.22■□□□□ 0.83
C6orf48-203ENST00000375638 CCDC196A0A1B0GTZ2 297 aa20.21■□□□□ 0.83
C6orf48-203ENST00000375638 PPP1R11O60927 126 aaPredicted RBP20.21■□□□□ 0.83
C6orf48-203ENST00000375638 IGHA2P01877 340 aa20.21■□□□□ 0.83
C6orf48-203ENST00000375638 EVCP57679 992 aa20.21■□□□□ 0.83
C6orf48-203ENST00000375638 CNTN2Q02246 1040 aa20.21■□□□□ 0.83
C6orf48-203ENST00000375638 CACNB2Q08289 660 aaPredicted RBP20.21■□□□□ 0.83
C6orf48-203ENST00000375638 BAATQ14032 418 aaPredicted RBP20.21■□□□□ 0.83
C6orf48-203ENST00000375638 MAP3K21Q5TCX8 1036 aa20.21■□□□□ 0.83
C6orf48-203ENST00000375638 ZNF467Q7Z7K2 595 aaPredicted RBP20.21■□□□□ 0.83
C6orf48-203ENST00000375638 FAM133AQ8N9E0 248 aa20.21■□□□□ 0.83
C6orf48-203ENST00000375638 RGS22Q8NE09 1264 aa20.21■□□□□ 0.83
C6orf48-203ENST00000375638 UPF2Q9HAU5 1272 aaKnown RBP20.21■□□□□ 0.83
C6orf48-203ENST00000375638 HMX1Q9NP08 348 aaPredicted RBP20.21■□□□□ 0.83
C6orf48-203ENST00000375638 SEC63Q9UGP8 760 aaKnown RBP20.21■□□□□ 0.83
C6orf48-203ENST00000375638 RPTORQ8N122 1335 aa20.21■□□□□ 0.83
C6orf48-203ENST00000375638 PTPDC1A2A3K4 754 aa20.2■□□□□ 0.82
C6orf48-203ENST00000375638 SOX10P56693 466 aa20.2■□□□□ 0.82
C6orf48-203ENST00000375638 RNF207Q6ZRF8 634 aa20.2■□□□□ 0.82
C6orf48-203ENST00000375638 MCF2L2Q86YR7 1114 aa20.2■□□□□ 0.82
C6orf48-203ENST00000375638 MSL3Q8N5Y2 521 aaKnown RBP20.2■□□□□ 0.82
C6orf48-203ENST00000375638 TINF2Q9BSI4 451 aa20.2■□□□□ 0.82
C6orf48-203ENST00000375638 C22orf23Q9BZE7 217 aa20.2■□□□□ 0.82
C6orf48-203ENST00000375638 MAF1Q9H063 256 aa20.2■□□□□ 0.82
C6orf48-203ENST00000375638 PDIA3P30101 505 aaKnown RBP20.19■□□□□ 0.82
C6orf48-203ENST00000375638 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.19■□□□□ 0.821e-12■□□□□ 10
C6orf48-203ENST00000375638 ALDH8A1Q9H2A2 487 aaPredicted RBP20.19■□□□□ 0.82
C6orf48-203ENST00000375638 FAM217BQ9NTX9 383 aaPredicted RBP20.19■□□□□ 0.82
C6orf48-203ENST00000375638 BAZ2BQ9UIF8 2168 aaKnown RBP20.18■□□□□ 0.82
C6orf48-203ENST00000375638 GJB1P08034 283 aa20.18■□□□□ 0.82
C6orf48-203ENST00000375638 CALML3P27482 149 aa20.18■□□□□ 0.82
C6orf48-203ENST00000375638 CDC27P30260 824 aa20.18■□□□□ 0.82
C6orf48-203ENST00000375638 ADD1P35611 737 aaKnown RBP20.18■□□□□ 0.82
C6orf48-203ENST00000375638 RPS6P62753 249 aaKnown RBP20.18■□□□□ 0.82
C6orf48-203ENST00000375638 ANKRD1Q15327 319 aa20.18■□□□□ 0.82
C6orf48-203ENST00000375638 IFFO2Q5TF58 517 aa20.18■□□□□ 0.82
C6orf48-203ENST00000375638 MAMDC4Q6UXC1 1216 aa20.18■□□□□ 0.82
C6orf48-203ENST00000375638 SLC30A10Q6XR72 485 aa20.18■□□□□ 0.82
C6orf48-203ENST00000375638 PAK6Q9NQU5 681 aaPredicted RBP20.18■□□□□ 0.82
C6orf48-203ENST00000375638 KIAA0100Q14667 2235 aaKnown RBP20.18■□□□□ 0.82
C6orf48-203ENST00000375638 ZNFX1Q9P2E3 1918 aaKnown RBP20.17■□□□□ 0.82
C6orf48-203ENST00000375638 SMCHD1A6NHR9 2005 aa20.17■□□□□ 0.82
C6orf48-203ENST00000375638 POTEFA5A3E0 1075 aa20.17■□□□□ 0.82
C6orf48-203ENST00000375638 SOWAHBA6NEL2 793 aa20.17■□□□□ 0.82
C6orf48-203ENST00000375638 NEK4P51957 841 aa20.17■□□□□ 0.82
C6orf48-203ENST00000375638 FUT2Q10981 343 aa20.17■□□□□ 0.82
C6orf48-203ENST00000375638 ZNF274Q96GC6 653 aaPredicted RBP20.17■□□□□ 0.82
C6orf48-203ENST00000375638 FGD4Q96M96 766 aa20.17■□□□□ 0.82
C6orf48-203ENST00000375638 LARP6Q9BRS8 491 aaKnown RBP20.17■□□□□ 0.82
C6orf48-203ENST00000375638 ADD3Q9UEY8 706 aaKnown RBP20.17■□□□□ 0.82
C6orf48-203ENST00000375638 NRBP1Q9UHY1 535 aa20.17■□□□□ 0.82
C6orf48-203ENST00000375638 CNPY2Q9Y2B0 182 aa20.17■□□□□ 0.82
C6orf48-203ENST00000375638 SYNGAP1Q96PV0 1343 aa20.17■□□□□ 0.82
C6orf48-203ENST00000375638 hCG_1642624A0A1W2PR95 340 aa20.16■□□□□ 0.82
C6orf48-203ENST00000375638 ASB14A6NK59 587 aa20.16■□□□□ 0.82
C6orf48-203ENST00000375638 CYBAP13498 195 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms