RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 GBP7Q8N8V2 638 aaPredicted RBP10.13□□□□□ -0.79
UBR4-201ENST00000375218 LRRC59Q96AG4 307 aaKnown RBP10.13□□□□□ -0.79
UBR4-201ENST00000375218 CYLDQ9NQC7 956 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 ATP10DQ9P241 1426 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 LRRC72A6NJI9 287 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 EIF3FO00303 357 aaPredicted RBP10.12□□□□□ -0.79
UBR4-201ENST00000375218 GALNSP34059 522 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 ETFBP38117 255 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 APOBRQ0VD83 1088 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 SEMA3AQ14563 771 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 LRP10Q7Z4F1 713 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 BRSK1Q8TDC3 778 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 EMID1Q96A84 441 aaPredicted RBP10.12□□□□□ -0.79
UBR4-201ENST00000375218 KRT82Q9NSB4 513 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 LAMA3Q16787 3333 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 MYH14Q7Z406 1995 aaKnown RBP10.12□□□□□ -0.79
UBR4-201ENST00000375218 CLDN10P78369 228 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 PDE4BQ07343 736 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 AP1B1Q10567 949 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 GNPTABQ3T906 1256 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 SFMBT2Q5VUG0 894 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 POMZP3Q6PJE2 187 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 GBP6Q6ZN66 633 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 USHBP1Q8N6Y0 703 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 IL17REQ8NFR9 667 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 TRIM8Q9BZR9 551 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 TMEM98Q9Y2Y6 226 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 SBF2Q86WG5 1849 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 MOXD2PA6NHM9 499 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 MYCP01106 439 aaPredicted RBP10.12□□□□□ -0.79
UBR4-201ENST00000375218 PCNAP12004 261 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 PDE4AP27815 886 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 GABREP78334 506 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 ITKQ08881 620 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 C7orf61Q8IZ16 206 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 TBC1D22AQ8WUA7 517 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 NUP133Q8WUM0 1156 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 LRGUKQ96M69 825 aa10.12□□□□□ -0.79
UBR4-201ENST00000375218 FAM170AA1A519 330 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 PRAMEF22A3QJZ6 481 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 FMNL1O95466 1100 aaPredicted RBP10.11□□□□□ -0.79
UBR4-201ENST00000375218 FERP16591 822 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 SLC12A2P55011 1212 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 APBA1Q02410 837 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 ITIH3Q06033 890 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 KIAA1211Q6ZU35 1233 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 SLAIN1Q8ND83 568 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 OR8H1Q8NGG4 311 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 MBIPQ9NS73 344 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 TRIM75PA6NK02 468 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 BTNL9Q6UXG8 535 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 GALNT5Q7Z7M9 940 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 KIAA1524Q8TCG1 905 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 CCT6BQ92526 530 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 CALCOCO1Q9P1Z2 691 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 PRELID1Q9Y255 219 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 HSPA1LP34931 641 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 RCN1Q15293 331 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 ERC1Q8IUD2 1116 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 CABLES1Q8TDN4 633 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 EPSTI1Q96J88 318 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 ST7Q9NRC1 585 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 SSX2IPQ9Y2D8 614 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 NDUFB9Q9Y6M9 179 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 A0A1B0GUL6 1792 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 EPN2O95208 641 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 ARHGEF6Q15052 776 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 WDR44Q5JSH3 913 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 TMC7Q7Z402 723 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 KIAA0907Q7Z7F0 614 aaPredicted RBP10.11□□□□□ -0.79
UBR4-201ENST00000375218 AFAP1L1Q8TED9 768 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 HERPUD2Q9BSE4 406 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 CRISPLD2Q9H0B8 497 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 SIL1Q9H173 461 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 GRPEL1Q9HAV7 217 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 ALG13Q9NP73 1137 aaKnown RBP10.11□□□□□ -0.79
UBR4-201ENST00000375218 ZNF180Q9UJW8 692 aa10.11□□□□□ -0.79
UBR4-201ENST00000375218 ARHGEF10O15013 1369 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 KCNQ3O43525 872 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 LZTS3O60299 673 aaPredicted RBP10.1□□□□□ -0.79
UBR4-201ENST00000375218 CHKAP35790 457 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 HOOK3Q86VS8 718 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 FAM26EQ8N5C1 309 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 PANK1Q8TE04 598 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 HOOK2Q96ED9 719 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 SENP2Q9HC62 589 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 ANKEF1Q9NU02 776 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 FNIP2Q9P278 1114 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 GIMAP2Q9UG22 337 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 COL5A2P05997 1499 aaPredicted RBP10.1□□□□□ -0.79
UBR4-201ENST00000375218 COL5A3P25940 1745 aaPredicted RBP10.1□□□□□ -0.79
UBR4-201ENST00000375218 TMCC2O75069 709 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 NMIQ13287 307 aaPredicted RBP10.1□□□□□ -0.79
UBR4-201ENST00000375218 RBM20Q5T481 1227 aaKnown RBP10.1□□□□□ -0.79
UBR4-201ENST00000375218 COLGALT2Q8IYK4 626 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 MTRQ99707 1265 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 MIS18AQ9NYP9 233 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.1□□□□□ -0.79
UBR4-201ENST00000375218 DGKBQ9Y6T7 804 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 NCOA3Q9Y6Q9 1424 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms