RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 TFAP4Q01664 338 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 CKAP4Q07065 602 aaKnown RBP20.1■□□□□ 0.81
PHF1-201ENST00000374512 CASP8Q14790 479 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 TRAPPC3LQ5T215 181 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 C12orf60Q5U649 245 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 TTI2Q6NXR4 508 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 WDR66Q8TBY9 1149 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 FAM71BQ8TC56 605 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 GUCA1BQ9UMX6 200 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 PCDHA6Q9UN73 950 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 MAPK8IP1Q9UQF2 711 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 PCDHA8Q9Y5H6 950 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 SAR1BQ9Y6B6 198 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 TARSL2A2RTX5 802 aaKnown RBP20.1■□□□□ 0.81
PHF1-201ENST00000374512 LDHBP07195 334 aaKnown RBP20.1■□□□□ 0.81
PHF1-201ENST00000374512 CDK17Q00537 523 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 ZSCAN26Q16670 478 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 MAP9Q49MG5 647 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 HSP90B2PQ58FF3 399 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 FIGNQ5HY92 759 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 EXOC1Q9NV70 894 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 MKRN1Q9UHC7 482 aaKnown RBP20.1■□□□□ 0.81
PHF1-201ENST00000374512 ROBO3Q96MS0 1386 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 TNRC6CQ9HCJ0 1690 aaKnown RBP20.09■□□□□ 0.81
PHF1-201ENST00000374512 IPO7O95373 1038 aaKnown RBP20.09■□□□□ 0.81
PHF1-201ENST00000374512 COBLL1Q53SF7 1204 aa20.09■□□□□ 0.81
PHF1-201ENST00000374512 WDR59Q6PJI9 974 aa20.09■□□□□ 0.81
PHF1-201ENST00000374512 BARHL2Q9NY43 387 aa20.09■□□□□ 0.81
PHF1-201ENST00000374512 ANO9A1A5B4 782 aa20.08■□□□□ 0.81
PHF1-201ENST00000374512 TRIM49BA6NDI0 452 aa20.08■□□□□ 0.81
PHF1-201ENST00000374512 ADAMTS3O15072 1205 aa20.08■□□□□ 0.81
PHF1-201ENST00000374512 USP14P54578 494 aa20.08■□□□□ 0.81
PHF1-201ENST00000374512 CCDC122Q5T0U0 273 aa20.08■□□□□ 0.81
PHF1-201ENST00000374512 AMOTL1Q8IY63 956 aa20.08■□□□□ 0.81
PHF1-201ENST00000374512 TTYH3Q9C0H2 523 aa20.08■□□□□ 0.81
PHF1-201ENST00000374512 ANKIB1Q9P2G1 1089 aa20.08■□□□□ 0.81
PHF1-201ENST00000374512 MAD2L2Q9UI95 211 aa20.08■□□□□ 0.81
PHF1-201ENST00000374512 LEMD3Q9Y2U8 911 aa20.08■□□□□ 0.81
PHF1-201ENST00000374512 A0A1W2PQJ5 194 aa20.08■□□□□ 0.8
PHF1-201ENST00000374512 EIF3CLB5ME19 914 aaKnown RBP20.08■□□□□ 0.8
PHF1-201ENST00000374512 CCNE1P24864 410 aa20.08■□□□□ 0.8
PHF1-201ENST00000374512 GSTO1P78417 241 aa20.08■□□□□ 0.8
PHF1-201ENST00000374512 ZBED6P86452 979 aa20.08■□□□□ 0.8
PHF1-201ENST00000374512 ORC2Q13416 577 aaPredicted RBP20.08■□□□□ 0.8
PHF1-201ENST00000374512 NOA1Q8NC60 698 aaKnown RBP20.08■□□□□ 0.8
PHF1-201ENST00000374512 GPKOWQ92917 476 aaPredicted RBP eCLIP20.08■□□□□ 0.85e-9■■■■□ 21.7
PHF1-201ENST00000374512 EIF3CQ99613 913 aaKnown RBP20.08■□□□□ 0.8
PHF1-201ENST00000374512 TUBGCP2Q9BSJ2 902 aa20.08■□□□□ 0.8
PHF1-201ENST00000374512 IL17RBQ9NRM6 502 aa20.08■□□□□ 0.8
PHF1-201ENST00000374512 ACTN2P35609 894 aa20.07■□□□□ 0.8
PHF1-201ENST00000374512 PMS1P54277 932 aaKnown RBP20.07■□□□□ 0.8
PHF1-201ENST00000374512 HERVK_113P62684 666 aa20.07■□□□□ 0.8
PHF1-201ENST00000374512 SLC4A8Q2Y0W8 1093 aa20.07■□□□□ 0.8
PHF1-201ENST00000374512 CSGALNACT2Q8N6G5 542 aa20.07■□□□□ 0.8
PHF1-201ENST00000374512 VPS18Q9P253 973 aa20.07■□□□□ 0.8
PHF1-201ENST00000374512 BAG3O95817 575 aa20.07■□□□□ 0.8
PHF1-201ENST00000374512 HOXA7P31268 230 aaPredicted RBP20.07■□□□□ 0.8
PHF1-201ENST00000374512 LMAN1P49257 510 aa20.07■□□□□ 0.8
PHF1-201ENST00000374512 AMPD3Q01432 767 aa20.07■□□□□ 0.8
PHF1-201ENST00000374512 P2RX5Q93086 422 aa20.07■□□□□ 0.8
PHF1-201ENST00000374512 C7orf25Q9BPX7 421 aa20.07■□□□□ 0.8
PHF1-201ENST00000374512 TMEM60Q9H2L4 133 aa20.07■□□□□ 0.8
PHF1-201ENST00000374512 MKNK2Q9HBH9 465 aa20.07■□□□□ 0.8
PHF1-201ENST00000374512 RPS6KA5O75582 802 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 IVLP07476 585 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 GRAPQ13588 217 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 MEX3CQ5U5Q3 659 aaKnown RBP20.06■□□□□ 0.8
PHF1-201ENST00000374512 NCAPH2Q6IBW4 605 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 FAM196AQ6ZSG2 479 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 KRT25Q7Z3Z0 450 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 KIAA1328Q86T90 577 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 GRAPLQ8TC17 118 aaPredicted RBP20.06■□□□□ 0.8
PHF1-201ENST00000374512 SH3RF3Q8TEJ3 882 aaPredicted RBP20.06■□□□□ 0.8
PHF1-201ENST00000374512 DUSP9Q99956 384 aaKnown RBP20.06■□□□□ 0.8
PHF1-201ENST00000374512 TSGA10Q9BZW7 698 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 STXBP3O00186 592 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 PES1O00541 588 aaKnown RBP20.06■□□□□ 0.8
PHF1-201ENST00000374512 ONECUT3O60422 494 aaPredicted RBP20.06■□□□□ 0.8
PHF1-201ENST00000374512 TRIM21P19474 475 aaKnown RBP20.06■□□□□ 0.8
PHF1-201ENST00000374512 AARSP49588 968 aaKnown RBP eCLIP20.06■□□□□ 0.81e-5■■□□□ 14
PHF1-201ENST00000374512 SLC20A2Q08357 652 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 NFIXQ14938 502 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 INF2Q27J81 1249 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 IQCEQ6IPM2 695 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 TYW1BQ6NUM6 668 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 LEKR1Q6ZMV7 388 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 ZSCAN29Q8IWY8 852 aaPredicted RBP20.06■□□□□ 0.8
PHF1-201ENST00000374512 STAG2Q8N3U4 1231 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 JAKMIP2Q96AA8 810 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 ERGIC2Q96RQ1 377 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 NAV1Q8NEY1 1877 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 MYH1P12882 1939 aa20.06■□□□□ 0.8
PHF1-201ENST00000374512 PALM3A6NDB9 673 aaPredicted RBP20.05■□□□□ 0.8
PHF1-201ENST00000374512 TBC1D8BQ0IIM8 1120 aa20.05■□□□□ 0.8
PHF1-201ENST00000374512 DYNLL2Q96FJ2 89 aa20.05■□□□□ 0.8
PHF1-201ENST00000374512 ZMYND12Q9H0C1 365 aa20.05■□□□□ 0.8
PHF1-201ENST00000374512 ZNF287Q9HBT7 754 aa20.05■□□□□ 0.8
PHF1-201ENST00000374512 TSPY3P0CV98 308 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 TSPY8P0CW00 308 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 ADRA2BP18089 450 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms