RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 NUP62CLQ9H1M0 184 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 PSTPIP2Q9H939 334 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 PICK1Q9NRD5 415 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 USP17L15C9J2P7 530 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 USP17L13C9JLJ4 530 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 USP17L11C9JVI0 530 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 USP17L18D6R9N7 530 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 USP17L22D6RA61 530 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 USP17L17D6RBQ6 530 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 USP17L19D6RCP7 530 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 USP17L20D6RJB6 530 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 SOCS7O14512 581 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 POTEIP0CG38 1075 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 POTEJP0CG39 1038 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 MAP3K9P80192 1104 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 USP17L24Q0WX57 530 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 USH1GQ495M9 461 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 SPECC1Q5M775 1068 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 USP17L6PQ6QN14 398 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 CCDC73Q6ZRK6 1079 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 ZNF579Q8NAF0 562 aaKnown RBP17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 TBCKQ8TEA7 893 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 TMEM60Q9H2L4 133 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 AFG3L2Q9Y4W6 797 aa17.91■□□□□ 0.46
NIPAL3-204ENST00000374399 ZNF536O15090 1300 aa17.9■□□□□ 0.46
NIPAL3-204ENST00000374399 IQCA1LA6NCM1 817 aa17.9■□□□□ 0.46
NIPAL3-204ENST00000374399 BMP15O95972 392 aa17.9■□□□□ 0.46
NIPAL3-204ENST00000374399 USP49Q70CQ1 688 aa17.9■□□□□ 0.46
NIPAL3-204ENST00000374399 C12orf42Q96LP6 360 aa17.9■□□□□ 0.46
NIPAL3-204ENST00000374399 CSRNP2Q9H175 543 aa17.9■□□□□ 0.46
NIPAL3-204ENST00000374399 AS3MTQ9HBK9 375 aa17.9■□□□□ 0.46
NIPAL3-204ENST00000374399 MRPL12P52815 198 aaKnown RBP17.89■□□□□ 0.46
NIPAL3-204ENST00000374399 USP14P54578 494 aa17.89■□□□□ 0.46
NIPAL3-204ENST00000374399 EAPPQ56P03 285 aaPredicted RBP17.89■□□□□ 0.46
NIPAL3-204ENST00000374399 MOB2Q70IA6 237 aa17.89■□□□□ 0.46
NIPAL3-204ENST00000374399 NEK8Q86SG6 692 aa17.89■□□□□ 0.46
NIPAL3-204ENST00000374399 DEKP35659 375 aaKnown RBP17.89■□□□□ 0.45
NIPAL3-204ENST00000374399 CCDC174Q6PII3 467 aa17.89■□□□□ 0.45
NIPAL3-204ENST00000374399 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
NIPAL3-204ENST00000374399 SLF1Q9BQI6 1058 aa17.89■□□□□ 0.45
NIPAL3-204ENST00000374399 RPAP3Q9H6T3 665 aaPredicted RBP17.89■□□□□ 0.45
NIPAL3-204ENST00000374399 ZNF202O95125 648 aa17.88■□□□□ 0.45
NIPAL3-204ENST00000374399 LETM1O95202 739 aaPredicted RBP17.88■□□□□ 0.45
NIPAL3-204ENST00000374399 HMGCS2P54868 508 aa17.88■□□□□ 0.45
NIPAL3-204ENST00000374399 CRYGNQ8WXF5 182 aa17.88■□□□□ 0.45
NIPAL3-204ENST00000374399 FERMT2Q96AC1 680 aa17.88■□□□□ 0.45
NIPAL3-204ENST00000374399 GOLGA6L3A6NEY3 463 aa17.87■□□□□ 0.45
NIPAL3-204ENST00000374399 PPP1R12BO60237 982 aaPredicted RBP17.87■□□□□ 0.45
NIPAL3-204ENST00000374399 MAP3K11Q16584 847 aa17.87■□□□□ 0.45
NIPAL3-204ENST00000374399 LETM2Q2VYF4 491 aa17.87■□□□□ 0.45
NIPAL3-204ENST00000374399 PNMA8AQ86V59 439 aaPredicted RBP17.87■□□□□ 0.45
NIPAL3-204ENST00000374399 CKAP2LQ8IYA6 745 aa17.87■□□□□ 0.45
NIPAL3-204ENST00000374399 PRPF38AQ8NAV1 312 aaKnown RBP17.87■□□□□ 0.45
NIPAL3-204ENST00000374399 TBC1D5Q92609 795 aa17.87■□□□□ 0.45
NIPAL3-204ENST00000374399 GLT8D2Q9H1C3 349 aa17.87■□□□□ 0.45
NIPAL3-204ENST00000374399 RBSNQ9H1K0 784 aa17.87■□□□□ 0.45
NIPAL3-204ENST00000374399 TNMDQ9H2S6 317 aa17.87■□□□□ 0.45
NIPAL3-204ENST00000374399 PPP1R9AQ9ULJ8 1098 aa17.87■□□□□ 0.45
NIPAL3-204ENST00000374399 COL11A1P12107 1806 aaPredicted RBP17.87■□□□□ 0.45
NIPAL3-204ENST00000374399 C19orf81C9J6K1 198 aa17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 SH3D19Q5HYK7 790 aa17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 ARL6IP4Q66PJ3 421 aaKnown RBP17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 LDHDQ86WU2 507 aa17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 EPSTI1Q96J88 318 aa17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 WNK4Q96J92 1243 aa17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 CLMNQ96JQ2 1002 aa17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 SLC38A10Q9HBR0 1119 aa17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 A0A087X0B3 334 aa17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 VWA3AA6NCI4 1184 aa17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 PIK3CDO00329 1044 aa17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 CCNT1O60563 726 aaKnown RBP17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 KINO60870 393 aaKnown RBP17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 FMR1Q06787 632 aaKnown RBP eCLIP17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 AGBL1Q96MI9 1066 aa17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 TANGO6Q9C0B7 1094 aa17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 KCNH3Q9ULD8 1083 aa17.86■□□□□ 0.45
NIPAL3-204ENST00000374399 FLOT1O75955 427 aa17.85■□□□□ 0.45
NIPAL3-204ENST00000374399 TDP2O95551 362 aa17.85■□□□□ 0.45
NIPAL3-204ENST00000374399 ICAM1P05362 532 aa17.85■□□□□ 0.45
NIPAL3-204ENST00000374399 SYKP43405 635 aa17.85■□□□□ 0.45
NIPAL3-204ENST00000374399 SAMD1Q6SPF0 538 aaPredicted RBP17.85■□□□□ 0.45
NIPAL3-204ENST00000374399 TIGD1Q96MW7 591 aa17.85■□□□□ 0.45
NIPAL3-204ENST00000374399 ANO3Q9BYT9 981 aa17.85■□□□□ 0.45
NIPAL3-204ENST00000374399 LOC285556D6RIA3 1793 aa17.85■□□□□ 0.45
NIPAL3-204ENST00000374399 SLC37A4O43826 429 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 HOXA13P31271 388 aaPredicted RBP17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 IREB2P48200 963 aaKnown RBP17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 AP3B2Q13367 1082 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 ORC2Q13416 577 aaPredicted RBP17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 LONRF3Q496Y0 759 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 REPS2Q8NFH8 660 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 SYMPKQ92797 1274 aaKnown RBP17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 MTMR9Q96QG7 549 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 GRPEL1Q9HAV7 217 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 ADAMTS5Q9UNA0 930 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 TRAF5O00463 557 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 XRCC6P12956 609 aaKnown RBP eCLIP17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 PRPHP41219 470 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 MAP1SQ66K74 1059 aaPredicted RBP17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 PPP4R3AQ6IN85 833 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms