RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 ACAD9Q9H845 621 aa21.47■■□□□ 1.03
CDX4-201ENST00000373514 DAXXQ9UER7 740 aaPredicted RBP21.47■■□□□ 1.03
CDX4-201ENST00000373514 PTPN22Q9Y2R2 807 aa21.47■■□□□ 1.03
CDX4-201ENST00000373514 GNRH1P01148 92 aa21.46■■□□□ 1.03
CDX4-201ENST00000373514 ADORA2AP29274 412 aa21.46■■□□□ 1.03
CDX4-201ENST00000373514 COPB2P35606 906 aa21.46■■□□□ 1.03
CDX4-201ENST00000373514 SCRN1Q12765 414 aa21.46■■□□□ 1.03
CDX4-201ENST00000373514 ANKRD1Q15327 319 aa21.46■■□□□ 1.03
CDX4-201ENST00000373514 ME3Q16798 604 aa21.46■■□□□ 1.03
CDX4-201ENST00000373514 HSCBQ8IWL3 235 aa21.46■■□□□ 1.03
CDX4-201ENST00000373514 RRP36Q96EU6 259 aaKnown RBP21.46■■□□□ 1.03
CDX4-201ENST00000373514 SLC15A5A6NIM6 579 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 PGK2P07205 417 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 CYP2B6P20813 491 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 ARHGEF6Q15052 776 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 NTRK3Q16288 839 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 NECAB1Q8N987 351 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 CHST13Q8NET6 341 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 CLEC4DQ8WXI8 215 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 USP6NLQ92738 828 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 PHKBQ93100 1093 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 NUDT12Q9BQG2 462 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 MCOLN1Q9GZU1 580 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 A1CFQ9NQ94 594 aaKnown RBP21.45■■□□□ 1.02
CDX4-201ENST00000373514 PNMA6FA0A0J9YX94 578 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 COBLO75128 1261 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 FCER1AP12319 257 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 HOXD10P28358 340 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 SMARCA1P28370 1054 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 ST3GAL1Q11201 340 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 TKFCQ3LXA3 575 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 SOCS4Q8WXH5 440 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 AMNQ9BXJ7 453 aa21.45■■□□□ 1.02
CDX4-201ENST00000373514 SLKQ9H2G2 1235 aaPredicted RBP21.45■■□□□ 1.02
CDX4-201ENST00000373514 ABCB11O95342 1321 aa21.44■■□□□ 1.02
CDX4-201ENST00000373514 ST18O60284 1047 aa21.44■■□□□ 1.02
CDX4-201ENST00000373514 PFKFB2O60825 505 aa21.44■■□□□ 1.02
CDX4-201ENST00000373514 MAP2K5Q13163 448 aa21.44■■□□□ 1.02
CDX4-201ENST00000373514 KCTD2Q14681 263 aa21.44■■□□□ 1.02
CDX4-201ENST00000373514 CCL14Q16627 93 aa21.44■■□□□ 1.02
CDX4-201ENST00000373514 NSMFQ6X4W1 530 aa21.44■■□□□ 1.02
CDX4-201ENST00000373514 NPLOC4Q8TAT6 608 aa21.44■■□□□ 1.02
CDX4-201ENST00000373514 GPKOWQ92917 476 aaPredicted RBP eCLIP21.44■■□□□ 1.02
CDX4-201ENST00000373514 SEC63Q9UGP8 760 aaKnown RBP21.44■■□□□ 1.02
CDX4-201ENST00000373514 FBXO40Q9UH90 709 aa21.44■■□□□ 1.02
CDX4-201ENST00000373514 OPLAHO14841 1288 aa21.43■■□□□ 1.02
CDX4-201ENST00000373514 ELNP15502 786 aa21.43■■□□□ 1.02
CDX4-201ENST00000373514 SLC30A10Q6XR72 485 aa21.43■■□□□ 1.02
CDX4-201ENST00000373514 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.43■■□□□ 1.02
CDX4-201ENST00000373514 ANKRD35Q8N283 1001 aa21.43■■□□□ 1.02
CDX4-201ENST00000373514 RAET1EQ8TD07 263 aa21.43■■□□□ 1.02
CDX4-201ENST00000373514 APBA2Q99767 749 aa21.43■■□□□ 1.02
CDX4-201ENST00000373514 PCDHA1Q9Y5I3 950 aa21.43■■□□□ 1.02
CDX4-201ENST00000373514 FRMPD3Q5JV73 1810 aa21.42■■□□□ 1.02
CDX4-201ENST00000373514 CCDC196A0A1B0GTZ2 297 aa21.42■■□□□ 1.02
CDX4-201ENST00000373514 STRNO43815 780 aa21.42■■□□□ 1.02
CDX4-201ENST00000373514 RGS2P41220 211 aa21.42■■□□□ 1.02
CDX4-201ENST00000373514 PPP2R5BQ15173 497 aa21.42■■□□□ 1.02
CDX4-201ENST00000373514 FBXO46Q6PJ61 603 aaPredicted RBP21.42■■□□□ 1.02
CDX4-201ENST00000373514 PURBQ96QR8 312 aaKnown RBP21.42■■□□□ 1.02
CDX4-201ENST00000373514 FLRT1Q9NZU1 646 aa21.42■■□□□ 1.02
CDX4-201ENST00000373514 V9GY48 417 aaPredicted RBP21.42■■□□□ 1.02
CDX4-201ENST00000373514 WWC2Q6AWC2 1192 aa21.41■■□□□ 1.02
CDX4-201ENST00000373514 ABRAQ8N0Z2 381 aa21.41■■□□□ 1.02
CDX4-201ENST00000373514 TRIB2Q92519 343 aa21.41■■□□□ 1.02
CDX4-201ENST00000373514 TBC1D5Q92609 795 aa21.41■■□□□ 1.02
CDX4-201ENST00000373514 GTF3C6Q969F1 213 aa21.41■■□□□ 1.02
CDX4-201ENST00000373514 SLC26A6Q9BXS9 759 aa21.41■■□□□ 1.02
CDX4-201ENST00000373514 LIMCH1Q9UPQ0 1083 aa21.41■■□□□ 1.02
CDX4-201ENST00000373514 PTPDC1A2A3K4 754 aa21.4■■□□□ 1.02
CDX4-201ENST00000373514 ADCY3O60266 1144 aa21.4■■□□□ 1.02
CDX4-201ENST00000373514 CTDNEP1O95476 244 aa21.4■■□□□ 1.02
CDX4-201ENST00000373514 IFNAR1P17181 557 aa21.4■■□□□ 1.02
CDX4-201ENST00000373514 PRMT2P55345 433 aa21.4■■□□□ 1.02
CDX4-201ENST00000373514 HEATR3Q7Z4Q2 680 aa21.4■■□□□ 1.02
CDX4-201ENST00000373514 DPP9Q86TI2 863 aa21.4■■□□□ 1.02
CDX4-201ENST00000373514 SH3TC2Q8TF17 1288 aa21.4■■□□□ 1.02
CDX4-201ENST00000373514 FGD4Q96M96 766 aa21.4■■□□□ 1.02
CDX4-201ENST00000373514 CYP39A1Q9NYL5 469 aa21.4■■□□□ 1.02
CDX4-201ENST00000373514 DNAJC25-GNG10A0A024R161 153 aa21.39■■□□□ 1.02
CDX4-201ENST00000373514 CPLX1O14810 134 aa21.39■■□□□ 1.02
CDX4-201ENST00000373514 CNTN2Q02246 1040 aa21.39■■□□□ 1.02
CDX4-201ENST00000373514 IRF5Q13568 498 aa21.39■■□□□ 1.02
CDX4-201ENST00000373514 IL27Q8NEV9 243 aa21.39■■□□□ 1.02
CDX4-201ENST00000373514 DDX11Q96FC9 970 aa21.39■■□□□ 1.02
CDX4-201ENST00000373514 PNMA2Q9UL42 364 aa21.39■■□□□ 1.02
CDX4-201ENST00000373514 DDX49Q9Y6V7 483 aaKnown RBP21.39■■□□□ 1.02
CDX4-201ENST00000373514 ASTN1O14525 1302 aa21.39■■□□□ 1.02
CDX4-201ENST00000373514 K7ELQ4 463 aaPredicted RBP21.39■■□□□ 1.01
CDX4-201ENST00000373514 CALML3P27482 149 aa21.39■■□□□ 1.01
CDX4-201ENST00000373514 TRIM32Q13049 653 aa21.39■■□□□ 1.01
CDX4-201ENST00000373514 BAATQ14032 418 aaPredicted RBP21.39■■□□□ 1.01
CDX4-201ENST00000373514 PKN1Q16512 942 aa21.39■■□□□ 1.01
CDX4-201ENST00000373514 PKN2Q16513 984 aaKnown RBP21.39■■□□□ 1.01
CDX4-201ENST00000373514 ZNF792Q3KQV3 632 aa21.39■■□□□ 1.01
CDX4-201ENST00000373514 TYW1BQ6NUM6 668 aa21.39■■□□□ 1.01
CDX4-201ENST00000373514 CCDC83Q8IWF9 413 aa21.39■■□□□ 1.01
CDX4-201ENST00000373514 MRPL11Q9Y3B7 192 aaKnown RBP21.39■■□□□ 1.01
CDX4-201ENST00000373514 PFASO15067 1338 aa21.38■■□□□ 1.01
CDX4-201ENST00000373514 CENPFP49454 3210 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms