RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 ATP5OP48047 213 aa9.9□□□□□ -0.82
CSMD2-205ENST00000373381 SH3KBP1Q96B97 665 aa9.9□□□□□ -0.82
CSMD2-205ENST00000373381 ADD3Q9UEY8 706 aaKnown RBP9.9□□□□□ -0.82
CSMD2-205ENST00000373381 EHBP1L1Q8N3D4 1523 aa9.9□□□□□ -0.82
CSMD2-205ENST00000373381 RP1L1Q8IWN7 2480 aaPredicted RBP9.9□□□□□ -0.82
CSMD2-205ENST00000373381 POLR2MP0CAP2 368 aa9.9□□□□□ -0.82
CSMD2-205ENST00000373381 FAM149B1Q96BN6 582 aa9.9□□□□□ -0.82
CSMD2-205ENST00000373381 SCOCQ9UIL1 159 aa9.9□□□□□ -0.82
CSMD2-205ENST00000373381 K7ENM7 598 aa9.9□□□□□ -0.82
CSMD2-205ENST00000373381 MBD4O95243 580 aa9.9□□□□□ -0.82
CSMD2-205ENST00000373381 CHCHD3Q9NX63 227 aaKnown RBP9.9□□□□□ -0.82
CSMD2-205ENST00000373381 CREB3O43889 395 aa9.9□□□□□ -0.82
CSMD2-205ENST00000373381 EEF1DP29692 281 aaKnown RBP9.9□□□□□ -0.82
CSMD2-205ENST00000373381 LBHD1Q9BQE6 289 aaPredicted RBP9.9□□□□□ -0.82
CSMD2-205ENST00000373381 RPRD1BQ9NQG5 326 aaKnown RBP9.9□□□□□ -0.82
CSMD2-205ENST00000373381 IGBP1P78318 339 aa9.9□□□□□ -0.83
CSMD2-205ENST00000373381 ZBTB18Q99592 522 aa9.9□□□□□ -0.83
CSMD2-205ENST00000373381 OLFML3Q9NRN5 406 aa9.9□□□□□ -0.83
CSMD2-205ENST00000373381 ATF2P15336 505 aa9.9□□□□□ -0.83
CSMD2-205ENST00000373381 LONRF2Q1L5Z9 754 aa9.9□□□□□ -0.83
CSMD2-205ENST00000373381 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.9□□□□□ -0.83
CSMD2-205ENST00000373381 TMEM87BQ96K49 555 aa9.9□□□□□ -0.83
CSMD2-205ENST00000373381 AATFQ9NY61 560 aaKnown RBP eCLIP9.9□□□□□ -0.83
CSMD2-205ENST00000373381 BNIP3LO60238 219 aa9.9□□□□□ -0.83
CSMD2-205ENST00000373381 TMEM259Q4ZIN3 620 aa9.9□□□□□ -0.83
CSMD2-205ENST00000373381 MIS18BP1Q6P0N0 1132 aa9.9□□□□□ -0.83
CSMD2-205ENST00000373381 PNMA3Q9UL41 463 aa9.9□□□□□ -0.83
CSMD2-205ENST00000373381 MAP3K15Q6ZN16 1313 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 SNX1Q13596 522 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 MEI1Q5TIA1 1274 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 CCHCR1Q8TD31 782 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 A0A1B0GW55 424 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 DUX4L2P0CJ85 424 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 DUX4L3P0CJ86 424 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 DUX4L4P0CJ87 422 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 DUX4L5P0CJ88 424 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 DUX4L6P0CJ89 424 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 DUX4L7P0CJ90 424 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 ALAS1P13196 640 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 YWHAHQ04917 246 aaPredicted RBP9.89□□□□□ -0.83
CSMD2-205ENST00000373381 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.89□□□□□ -0.83
CSMD2-205ENST00000373381 DUX4Q9UBX2 424 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 ARHGEF9O43307 516 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 AOC3Q16853 763 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 ZSCAN23Q3MJ62 389 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 HACD3Q9P035 362 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 IFNKQ9P0W0 207 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 ZBTB41Q5SVQ8 909 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 URGCPQ8TCY9 931 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 GPBP1L1Q9HC44 474 aaPredicted RBP9.89□□□□□ -0.83
CSMD2-205ENST00000373381 SUPT20HL1Q3ZLR7 823 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 TRIM67Q6ZTA4 783 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 TMEM106CQ9BVX2 250 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 MED7O43513 233 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 GSNP06396 782 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 PPP1R2P3Q6NXS1 205 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 STK38LQ9Y2H1 464 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 ATG16L1Q676U5 607 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 ARMCX2Q7L311 632 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 KIF17Q9P2E2 1029 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 TTC41PQ6P2S7 1318 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 DNAAF3Q8N9W5 541 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 TNNQ9UQP3 1299 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 EFCAB8A8MWE9 144 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 ACTN1P12814 892 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 VPS41P49754 854 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 RHPN1Q8TCX5 695 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 SENP1Q9P0U3 644 aa9.89□□□□□ -0.83
CSMD2-205ENST00000373381 SKIP12755 728 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 NSFP46459 744 aaKnown RBP9.88□□□□□ -0.83
CSMD2-205ENST00000373381 ARHGAP44Q17R89 818 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 OR9Q1Q8NGQ5 310 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 NDEL1Q9GZM8 345 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 SPATS2LQ9NUQ6 558 aaKnown RBP9.88□□□□□ -0.83
CSMD2-205ENST00000373381 MCF2LO15068 1137 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 ART3Q13508 389 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 EIF4G3O43432 1585 aaKnown RBP9.88□□□□□ -0.83
CSMD2-205ENST00000373381 LUC7L3O95232 432 aaKnown RBP9.88□□□□□ -0.83
CSMD2-205ENST00000373381 ARL4AP40617 200 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 KRT71Q3SY84 523 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 TMTC3Q6ZXV5 915 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 SIX6OS1Q8N1H7 587 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 MTIF3Q9H2K0 278 aaKnown RBP9.88□□□□□ -0.83
CSMD2-205ENST00000373381 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.88□□□□□ -0.83
CSMD2-205ENST00000373381 CCDC151A5D8V7 595 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 MEIS1O00470 390 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 KSR2Q6VAB6 950 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 CFAP61Q8NHU2 1237 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 COPRSQ9NQ92 184 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 ANLNQ9NQW6 1124 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 MAN1A2O60476 641 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 LMNAP02545 664 aaKnown RBP9.88□□□□□ -0.83
CSMD2-205ENST00000373381 IREB2P48200 963 aaKnown RBP9.88□□□□□ -0.83
CSMD2-205ENST00000373381 AKAP4Q5JQC9 854 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 HOMER3Q9NSC5 361 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 TCF3P15923 654 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 PHKG1Q16816 387 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 DNAJC25Q9H1X3 360 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 HIP1RO75146 1068 aa9.88□□□□□ -0.83
CSMD2-205ENST00000373381 APOA4P06727 396 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms